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Down-regulation of SENP1 Expression Increases Apoptosis of Burkitt Lymphoma Cells

  • Huang, Bin-Bin;Gao, Qing-Mei;Liang, Wei;Xiu, Bing;Zhang, Wen-Jun;Liang, Ai-Bin
    • Asian Pacific Journal of Cancer Prevention
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    • v.13 no.5
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    • pp.2045-2049
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    • 2012
  • Objective: To investigate the effect of down-regulation of Sentrin/SUMO-specific protease 1 (SENP1) expression on the apoptosis of human Burkitt lymphoma cells (Daudi cells) and potential mechanisms. Methods: Short hairpin RNA (shRNA) targeting SENP1 was designed and synthesized and then cloned into a lentiviral vector. A lentiviral packaging plasmid was used to transfect Daudi cells (sh-SENP1-Daudi group). Daudi cells without transfection (Daudi group) and Daudi cells transfected with blank plasmid (sh-NC-Daudi group) served as control groups. Flow cytometry was performed to screen GFP positive cells and semiquantitative PCR and Western blot assays were employed to detect the inference efficiency. The morphology of cells was observed under a microscope before and after transfection. Fluorescence quantitative PCR and Western blot assays were conducted to measure the mRNA and protein expression of apoptosis related molecules (caspase-3, 8 and 9). After treatment with $COCl_2$ for 24 h, the mRNA and protein expression of hypoxia inducible factor -$1{\alpha}$ (HIF-$1{\alpha}$) was determined. Results: Sequencing showed the expression vectors of shRNA targeting SENP1 to be successfully constructed. Following screening of GFP positive cells by FCM, semiqualitative PCR showed the interference efficiency was $79.2{\pm}0.026%$. At 48 h after transfection, the Daudi cells became shrunken, had irregular edges and presented apoptotic bodies. Western blot assay revealed increase in expression of caspase-3, 8 and 9 with prolongation of transfection (P<0.05). Following hypoxia treatment, mRNA expression of HIF-$1{\alpha}$ remained unchanged in three groups (P>0.05) but the protein expression of HIF-$1{\alpha}$ markedly increased (P<0.05). However, in the sh-SENP1-Daudi group, the protein expression of HIF-$1{\alpha}$ remained unchanged Conclusion: SENP1-shRNA can efficiently inhibit SENP1 expression in Daudi cells. SENP1 inhibition may promote cell apoptosis. These findings suggest that SENP1 may serve as an important target in the gene therapy of Burkitts lymphoma.

Design of Digit Recognition System Realized with the Aid of Fuzzy RBFNNs and Incremental-PCA (퍼지 RBFNNs와 증분형 주성분 분석법으로 실현된 숫자 인식 시스템의 설계)

  • Kim, Bong-Youn;Oh, Sung-Kwun;Kim, Jin-Yul
    • Journal of the Korean Institute of Intelligent Systems
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    • v.26 no.1
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    • pp.56-63
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    • 2016
  • In this study, we introduce a design of Fuzzy RBFNNs-based digit recognition system using the incremental-PCA in order to recognize the handwritten digits. The Principal Component Analysis (PCA) is a widely-adopted dimensional reduction algorithm, but it needs high computing overhead for feature extraction in case of using high dimensional images or a large amount of training data. To alleviate such problem, the incremental-PCA is proposed for the computationally efficient processing as well as the incremental learning of high dimensional data in the feature extraction stage. The architecture of Fuzzy Radial Basis Function Neural Networks (RBFNN) consists of three functional modules such as condition, conclusion, and inference part. In the condition part, the input space is partitioned with the use of fuzzy clustering realized by means of the Fuzzy C-Means (FCM) algorithm. Also, it is used instead of gaussian function to consider the characteristic of input data. In the conclusion part, connection weights are used as the extended diverse types in polynomial expression such as constant, linear, quadratic and modified quadratic. Experimental results conducted on the benchmarking MNIST handwritten digit database demonstrate the effectiveness and efficiency of the proposed digit recognition system when compared with other studies.

Ingredient analysis of 태환이식 excavated from 황남대총 남분 and the characteristics (황남대총 남분출토 태환이식의 성분분석과 그 특징)

  • Ju, Jin-ok;Kang, Dai-il
    • 보존과학연구
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    • s.27
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    • pp.129-143
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    • 2006
  • This report is on a scientific investigation of 3 pairs of 금제태환이식 which were excavated from 황남대총 납분. 태환 is a main part of 태환이식 and it could be classified with 4 types in how to produce, especially how many the golden petal was used. In this investigation, they,3 pairs of 금제태환이식 from 황남대총 남분, were in 3 of 4 types and also I could find that this result was not on the technical progress but on the ingredient of metal. Also, In the result of ingredient assay, I could find that although they were in one pair of 태환 one piece was made in gold and silver alloy and the other piece was made in 99.5 percent of pure Ag with gold amalgam plating. And the another pair was getting red from others because of making in 33percent of Ag and 77 percent of gold, high Ag content. And All pairs of 태환 have a small quantity of Copper. As above, although they are one pair they have the difference of how to produce and the difference of volume and ingredient content, it means that these pairs of 태환 from 황남대총 남분 were made in pressure of time. From now on, if we investigate the ingredient and how to produce of 태환이식 in the local comparative analysis, namely natural science method, we can find out the metal art technique and the social aspect of the ancient times as not analogical inference but scientific basis.

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Parent-Child Difference in Attitudes, Resources, and Constraints, and the Impacts of these Factors on Generational Proximity in the United States and Japan (노인 부모와 자녀 사이의 지리적 근접성에 대한 연구 : 미국과 일본의 사례를 중심으로)

  • 박경숙
    • Korea journal of population studies
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    • v.20 no.2
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    • pp.67-98
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    • 1997
  • This study examines multi-level factors geographic proximities between elderly parents and their children in the United States and Japan. Despite their similar economies, the United States and Japan show a significant difference in their patterns of generational proximity. In 1993, half of US non-Hisapnic white parents aged 70 or over lived separately but within 10 miles of their nearest children and a majority of them lived far from their non-nearest children. The family geographic network for Japanese elderly parents is more hierarchial. In 1989, 74 percent of Japanese parents aged 70 and over lived with their nearest children but most of them lived far from their non-nearest children. To explain this distinctive pattern of inter- and intra-family differences in generational proximities in the two societies, this study employs a multi-level analysis which compares the relative importance of life course conditions of elderly parents and their children and economic and ecological characteristics of elderly parent's places of residence in influencing generational proximities.

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Data Bias Optimization based Association Reasoning Model for Road Risk Detection (도로 위험 탐지를 위한 데이터 편향성 최적화 기반 연관 추론 모델)

  • Ryu, Seong-Eun;Kim, Hyun-Jin;Koo, Byung-Kook;Kwon, Hye-Jeong;Park, Roy C.;Chung, Kyungyong
    • Journal of the Korea Convergence Society
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    • v.11 no.9
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    • pp.1-6
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    • 2020
  • In this study, we propose an association inference model based on data bias optimization for road hazard detection. This is a mining model based on association analysis to collect user's personal characteristics and surrounding environment data and provide traffic accident prevention services. This creates transaction data composed of various context variables. Based on the generated information, a meaningful correlation of variables in each transaction is derived through correlation pattern analysis. Considering the bias of classified categorical data, pruning is performed with optimized support and reliability values. Based on the extracted high-level association rules, a risk detection model for personal characteristics and driving road conditions is provided to users. This enables traffic services that overcome the data bias problem and prevent potential road accidents by considering the association between data. In the performance evaluation, the proposed method is excellently evaluated as 0.778 in accuracy and 0.743 in the Kappa coefficient.

A development of Bayesian Copula model for a bivariate drought frequency analysis (이변량 가뭄빈도해석을 위한 Bayesian Copula 모델 개발)

  • Kim, Jin-Young;Kim, Jin-Guk;Cho, Young-Hyun;Kwon, Hyun-Han
    • Journal of Korea Water Resources Association
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    • v.50 no.11
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    • pp.745-758
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    • 2017
  • The copula-based models have been successfully applied to hydrological modeling including drought frequency analysis and time series modeling. However, uncertainty estimation associated with the parameters of these model is not often properly addressed. In these context, the main purposes of this study are to develop the Bayesian inference scheme for bivariate copula functions. The main applications considered are two-fold: First, this study developed and tested an approach to copula model parameter estimation within a Bayesian framework for drought frequency analysis. The proposed modeling scheme was shown to correctly estimate model parameters and detect the underlying dependence structure of the assumed copula functions in the synthetic dataset. The model was then used to estimate the joint return period of the recent 2013~2015 drought events in the Han River watershed. The joint return period of the drought duration and drought severity was above 100 years for many of stations. The results obtained in the validation process showed that the proposed model could effectively reproduce the underlying distribution of observed extreme rainfalls as well as explicitly account for parameter uncertainty in the bivariate drought frequency analysis.

Inference of the Conceptual Model of Wild Gardens - A Comparative Study of William Robinson and Gertrude Jekyll - (와일드 가든(Wild Garden)의 개념적 모형 유추 - 윌리암 로빈슨(William Robinson)과 거투르드 제킬(Gertrude Jekyll)의 비교 연구 -)

  • Park, Eun-Yeong;Yoon, Sang-Jun
    • Journal of the Korean Institute of Traditional Landscape Architecture
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    • v.31 no.4
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    • pp.62-69
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    • 2013
  • The origin of natural planting, which is getting the spotlight in modern time facing natural and environmental problems, can be found from wild gardens. They were started by William Robinson and concretely embodied by Gertrude Jekyll. It is worth shedding new light on wild gardens, as they served as a pathbreaker for ecological design and an important foundation for the specialization of naturalism, which are part of the most important topics in modern gardens. This study aimed to infer the conceptual model of wild gardens and identify their historic significance by comparatively analyzing Robinson's Gravetye Manor and Jekyll's Munstead Wood. The results are: Firstly, they inherited inspirations for spatial organization from basic cottage gardens and introduced informal forms. Secondly, in terms of the use of materials, they had observed various climates in their journeys so that they could use both native and naturalized plants based on their understanding of the plants' hardiness and exotic species. They also displayed interests in plants in the woodlands and forests. Thirdly, in terms of design techniques, they investigated the colors and textures of individual plants and their relationships to produce a variety of views that resembled nature in microcosm. Fourthly, in terms of maintenance, their basic orientation was the minimum maintenance to allow plants to live according to their nature.

Development of a deep-learning based automatic tracking of moving vehicles and incident detection processes on tunnels (딥러닝 기반 터널 내 이동체 자동 추적 및 유고상황 자동 감지 프로세스 개발)

  • Lee, Kyu Beom;Shin, Hyu Soung;Kim, Dong Gyu
    • Journal of Korean Tunnelling and Underground Space Association
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    • v.20 no.6
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    • pp.1161-1175
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    • 2018
  • An unexpected event could be easily followed by a large secondary accident due to the limitation in sight of drivers in road tunnels. Therefore, a series of automated incident detection systems have been under operation, which, however, appear in very low detection rates due to very low image qualities on CCTVs in tunnels. In order to overcome that limit, deep learning based tunnel incident detection system was developed, which already showed high detection rates in November of 2017. However, since the object detection process could deal with only still images, moving direction and speed of moving vehicles could not be identified. Furthermore it was hard to detect stopping and reverse the status of moving vehicles. Therefore, apart from the object detection, an object tracking method has been introduced and combined with the detection algorithm to track the moving vehicles. Also, stopping-reverse discrimination algorithm was proposed, thereby implementing into the combined incident detection processes. Each performance on detection of stopping, reverse driving and fire incident state were evaluated with showing 100% detection rate. But the detection for 'person' object appears relatively low success rate to 78.5%. Nevertheless, it is believed that the enlarged richness of image big-data could dramatically enhance the detection capacity of the automatic incident detection system.

An Analysis of Media of Social Studies 1 Textbooks for the Middle School with the Information Processing Model (정보처리모형을 이용한 중학교 『사회 1』 교과서 수록 매체 분석)

  • Song, Gi-Ho
    • Journal of the Korean Society for Library and Information Science
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    • v.53 no.2
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    • pp.5-27
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    • 2019
  • The purpose of this study is to analyze the media of middle school social studies 1 textbooks with the information processing model and to suggest educational information services of teacher librarians under a collaborative Instruction. For this purpose, 1,089 inquiry tasks embedded in 8 types of textbooks for middle school social studies developed under the 2015 revised curriculum were analyzed. The media as an input element was analyzed by the type and the characteristic as a processing element was analyzed by the cognitive behavior types. And the aspect of the output factor of the media utilized the multiple intelligences. As a result of the analysis, the media in the inquiry task solving process mainly consisted of visual media based on photographs and illustrations and general reading materials. The processing method of media is understanding through analysis and inference through structuring. And the output utilized speaking and writing of the language intelligence. Based on the results, it is shown that educational information services that teacher librarians could provide for inquiry activities are composed of developing curriculum map, teaching inquiry processing and skills, and designing work sheets with graphic organizer and multiple intelligences under the information processing steps.

Low Power ADC Design for Mixed Signal Convolutional Neural Network Accelerator (혼성신호 컨볼루션 뉴럴 네트워크 가속기를 위한 저전력 ADC설계)

  • Lee, Jung Yeon;Asghar, Malik Summair;Arslan, Saad;Kim, HyungWon
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.25 no.11
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    • pp.1627-1634
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    • 2021
  • This paper introduces a low-power compact ADC circuit for analog Convolutional filter for low-power neural network accelerator SOC. While convolutional neural network accelerators can speed up the learning and inference process, they have drawback of consuming excessive power and occupying large chip area due to large number of multiply-and-accumulate operators when implemented in complex digital circuits. To overcome these drawbacks, we implemented an analog convolutional filter that consists of an analog multiply-and-accumulate arithmetic circuit along with an ADC. This paper is focused on the design optimization of a low-power 8bit SAR ADC for the analog convolutional filter accelerator We demonstrate how to minimize the capacitor-array DAC, an important component of SAR ADC, which is three times smaller than the conventional circuit. The proposed ADC has been fabricated in CMOS 65nm process. It achieves an overall size of 1355.7㎛2, power consumption of 2.6㎼ at a frequency of 100MHz, SNDR of 44.19 dB, and ENOB of 7.04bit.