• Genomics & Informatics
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• v.15 no.1
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• pp.11-18
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• 2017

Nowadays, huge volumes of chromatin immunoprecipitation-sequencing (ChIP-Seq) data are generated to increase the knowledge on DNA-protein interactions in the cell, and accordingly, many tools have been developed for ChIP-Seq analysis. Here, we provide an example of a streamlined workflow for ChIP-Seq data analysis composed of only four packages in Bioconductor: dada2, QuasR, mosaics, and ChIPseeker. 'dada2' performs trimming of the high-throughput sequencing data. 'QuasR' and 'mosaics' perform quality control and mapping of the input reads to the reference genome and peak calling, respectively. Finally, 'ChIPseeker' performs annotation and visualization of the called peaks. This workflow runs well independently of operating systems (e.g., Windows, Mac, or Linux) and processes the input fastq files into various results in one run. R code is available at github: https://github.com/ddhb/Workflow_of_Chipseq.git.

• Proceedings of the Korean Society of Broadcast Engineers Conference
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• 2009.01a
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• pp.794-798
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• 2009

We introduce an implementation of plug-ins on PLUTO. These plug-ins discriminate inflammatory nodules from other types of nodules in chest X-ray CT images. The PLUTO is a common platform for computer-aided diagnosis systems on Microsoft Windows series and it is easy to add new functions as plug-ins. We coded two plug-ins. One of the them calculates features based on medical knowledge. The other plug-in calculates parameters to classify the type of nodules, and it also classifies nodules into inflammatory nodules and others using SVM. These plug-ins are coded using MIST library which is produced at Nagoya University, Japan. In our previous study, the MIST library was parallelized, so that we can utilize a number of CPUs to calculate features and SVM learning/classifying depending on the amount of computation. Using these plug-ins, it became easy to extract features to discriminate inflammatory nodules from other types of nodules and to change parameters for feature extraction and SVM learning/classifying with GUI interface. The accuracy of the classifying result is 100% with 78 solid nodules which contains 43 inflammatory nodules and 35 other type of nodules.

• 제어로봇시스템학회:학술대회논문집
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• 2000.10a
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• pp.123-123
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• 2000

Polishing a die that has free-form surfaces is a time-consuming and tedious job, and requires a considerable amount of high-precision skill. In order to reduce the polishing time and cope with the shortage of skilled workers, a user-friendly automatic polishing system was developed in this research. The polishing system with five degrees of freedom is able to keep the polishing tool normal to the die surface. The polishing system is controlled by a PC-NC controller. And, to easily onerate the developed polishing system, this stud)r developed a integrated program in the Windows environment. This program consists of 4 modules: polishing module, a graphic simulator, a polishing data generation module, and a teaching. Also, the automatic teaching system was developed to easily obtain a teaching data. The developed teaching system consists of a three dimensional joystick and a proximity sensor. In order to evaluate stability of the driving program and the leaching system, polishing experiments of the die of saddle shape were carried out.

• Journal of radiological science and technology
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• v.23 no.1
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• pp.103-111
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• 2000

In recent years, medical procedures have become more complex, while financial pressures for shortened hospital stays and increased efficiency in patient care have increased. As a result, several shortcomings of present film-based systems for managing medical images have become apparent. Maintaining film space is labor intensive and consumes valuable space. Because only single copies of radiological examinations exist, they are prone to being lost or misplaced, thereby consuming additional valuable time and expense. In this paper, MINI-PACS for image archiving, transmission, and viewing offers a solution to these problems. Proposed MINI-PACS consists of mainly four parts such as Web Module, Client-Server Module, Internal Module, Acquisition Module. In addition, MINI-PACS system includes DICOM Converter that Non-DICOM file format converts standard file format. In Client-Server Module case, Proposed system is combined both SCU(Service Class User: Client) part and SCP(Service Class Provider: Server)part therefore this system provides the high resolution image processing techniques based on windows platform. Because general PACS system is too expensive for Medium and Small hospitals to install and operate the full-PACS. Also, we constructed Web Module for database connection through the WWW.

• KIEAE Journal
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• v.8 no.1
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• pp.11-18
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• 2008

The purpose of this study is to analyze application methods and structural characteristics of each element of environment-friendly European housing through classification of skin types. The results of the study are following. 1) The skins are classified by three types; single skin with multi layers, double skin with single layer and double skin with multi layers. 2) Most single skins with multi-layer are composed with wooden louvers, sun blinds and insulating windows. There are introduction of atrium and balcony, and variation sectional space composition according to cases. 3) There are two types of double skins; to put cavity between inner skin and outer skin and more extensional spaces such as balconies, corridors and stair halls. Solar walls and mechanical ventilators are often introduced to double skins with multi-layer. 4) The functions of the latest environment-friendly skins are vary from controllers and buffers of indoor environmental elements such as temperature, light, air and sound to equipments to perform essential functions to efficiently operate HVAC systems.

• Journal of ILASS-Korea
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• v.22 no.4
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• pp.218-224
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• 2017

In order to improve the quality of air in urban areas, the emission regulations are being strengthened by the government. The on-road test of light-duty vehicles was started with PEMS because certification test mode does not sufficiently reflect on-road conditions. Therefore, The PEMS-based test was implemented from Sep. 2017 in Europe and Korea. However, this is lack of data on various on-road patterns in Korea. The purpose of the present study has analyzed the effect of speed per acceleration and acceleration on NOx emission on-road driving. The test route consisted of urban, rural, and motorway in Seoul. This study has been conducted by Euro-6 vehicles using on SCR system with PEMS. The on-road emission characteristics were evaluated by moving averaging windows (MAW) method. In results, RDE-NOx by severe driving pattern has been 1.4 times higher than soft driving pattern NIER Route 1.

• Korean Journal of Air-Conditioning and Refrigeration Engineering
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• v.26 no.11
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• pp.512-521
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• 2014

Recently, multiple glazing units, frames, complex fenestration systems, and windows with shading devices have been developed to save cooling energy in buildings. However, very little work has been conducted on developing a direct experimental test method of the solar heat gain coefficient(SHGC) for new fenestration techniques. This study aims to develop and evaluate a test apparatus to measure the SHGC, according to the KS L 9107 test method. The performance of the solar simulator was class A, B, and A, for spectral match, non-uniformity, and instability irradiance, respectively. The differences between the measured and calculated SHGC values were found to range between 0.001 and 0.011, and for all test specimens they agreed within 4%. These results establish the validity of the test apparatus. This system is thus expected to be useful in assessing the energy performance for various types of fenestration.

• Proceedings of the SAREK Conference
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• 2008.06a
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• pp.282-287
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• 2008

Identification of steady-state is the first step in developing a fault detection and diagnosis (FDD) system. In a complete FDD system, the steady-state detector will be included as a module in a self-learning algorithm which enables the working system's reference model to "tune" itself to its particular installation. In this study, a steady-state detector of a residential air conditioner based on moving windows was designed. Seven representing measurements were selected as key features for steady-state detection. The optimized moving window size and the feature thresholds was suggested through startup transient test and no-fault steady-state test. Performance of the steady-state detector was verified during indoor load change test. From the research, the general methodology to design a moving window steady-state detector was provided for vapor compression applications.

• The Journal of Korean Association of Computer Education
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• v.3 no.1
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• pp.109-115
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• 2000

In this paper, we have designed the management System to monitor and control computers running on MS Windows in the PC room using SNMP. The proposed system has controlling capability to control the status of PC and monitoring functions to have real-time monitoring and process control. In the controlling system, it supports update and setting of the configuration information of PC and backup/restore the information when it happens to be some faults. In the monitoring system, it has monitoring the PC of students, controlling the process on PC, and invoking a new job. This system contributes to enhance the effectiveness of teacher's educational activities in PC room by controlling and monitoring the program running on student's computer.

• Journal of Korean Public Health Nursing
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• v.19 no.2
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• pp.188-203
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• 2005

The study was performed to provide basic data for developing a coordinated health and social service model. Method: The subjects consisted of 1000 residents in Wonju city. The sampling process was randomized stratified into 26 geographical areas. The data was collected from Apr. 16nd, to May. 15nd, 2002 by using a structured questionnaire that included general characteristics, the patterns of disease, the family function and the community support systems. The collected data was analyzed by the SPSS. windows program via descriptive statistics, correlation testing and t-tests. Result: 61.7% of the elderly perceived their health status as being poor. There were correlations among age, income and the way clients perceived their health status. The prevalence rate of chronic disease was 70.8% in the elderly. The prevalence rate for arthritis was the highest (33.6%). The average number of diseases in the target populations was 2.31; it was 2.65 in the deprived elderly group and 2.47 in the elderly group. 35.4% of residents did not have any family care giver. 61.2% of the clients needed support by the health and social services. Conclusions; Coordinated health and social services need to be allocated by priority to the elderly and to the socially and economic deprived clients.