• 제목/요약/키워드: Wild strain

검색결과 607건 처리시간 0.028초

Identification of a Novel Genetic Locus Affecting ptsG Expression in Escherichia coli

  • Shin Dong-Woo;Lee Sang-Mi;Shin Yu-Rae;Ryu Sang-Ryeol
    • Journal of Microbiology and Biotechnology
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    • 제16권5호
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    • pp.795-798
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    • 2006
  • The phosphoenolpyruvate-dependent carbohydrate phosphotransferase system (PTS) is responsible for the simultaneous transfer and phosphorylation of various carbon sources in Escherichia coli. The ptsG gene encoding the enzyme $IICB^{Glc}$, the membrane component of the glucose-specific PTS, is repressed by Mlc and activated by the CRP cAMP complex; various other factors, such as Fis, FruR, and ArcA, are also known to be involved in ptsG regulation. Thus, in an attempt to discover a novel gene affecting the regulation of ptsG, a mutant with a decreased ptsG transcription in the presence of glucose compared with the wild-type strain was screened using transposon random mutagenesis. The mutant was found to have a transposon insertion in yhjV, a putative gene encoding a transporter protein whose function is yet unknown.

Penicillium verruculosum의 종내원형질 융합체의 분리 및 특성 (Isolation and Characterization of Intraspecific Complementing Fusants of Penicillium verruculosum)

  • Chung, Ki-Chul;Park, Chang-Ryeol;Suk Bai;Chun, Soon-Bai;Kim, Ki-Chung
    • 한국미생물·생명공학회지
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    • 제16권3호
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    • pp.182-186
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    • 1988
  • 원형질체 융합기술에 의한 Penicillium verruculosum 균주개량 가능성을 검토하였다. 영양요 구변이주간의 원형질 융합체 165주중 cellulase 고생산 융합체로 선별된 6주의 cellulase 활성은 야생주에 비해 2배이상, 모균주에 비해 1.2-4.4배의 증가를 나타냈다. Cellulase 고생산 융합체는 유전적 안정성조사, DNA 함량 및 핵염색 비교검토를 통해 핵융합이 일어난 것으로 확인되었고, 핵형이 이수체이며 4 개월 이상의 계대배양 후에도 자연형질 분리가 거의 일어나지 않는 것으로 보아 이들 융합체의 안정성이 매우 높은 것으로 인정되었다.

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Optimization and Scale-Up of Succinic Acid Production by Mannheimia succiniciproducens LPK7

  • Oh, In-Jae;Kim, Dong-Hyun;Oh, Eun-Kyoung;Lee, Sang-Yup;Lee, Jin-Won
    • Journal of Microbiology and Biotechnology
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    • 제19권2호
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    • pp.167-171
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    • 2009
  • The effects of culture conditions on succinic acid production and its possible scale-up have been studied. Mannheimia succiniciproducens LPK7, engineered for enhanced production of succinic acid and reduced by-product secretion, was used for the experiments. Mannheimia succiniciproducens LPK7 is a knock-out strain of wild type deficient in the ldhA, pflB, and pta-ackA genes, and is derived from Mannheimia succiniciproducens MBEL55E. Process optimization of factors including optimal temperature, pH, carbon source, and nitrogen source was performed to enhance the production of succinic acid in flasks. To observe scale-up effects, batch fermentation was carried out at various working volumes. At a working volume of 7.0 l, the final succinic acid concentration and yield were 15.4g/l and 0.86g/g. This result shows similar amount of succinic acid obtained in lab-scale fermentation, and it is possible to scale up to larger fermentors without major problems.

Biodegradation of Endocrine-disrupting Bisphenol A by White Rot Fungus Irpex lacteus

  • Shin, Eun-Hye;Choi, Hyoung-Tae;Song, Hong-Gyu
    • Journal of Microbiology and Biotechnology
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    • 제17권7호
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    • pp.1147-1151
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    • 2007
  • Biodegradation of endocrine-disrupting bisphenol A was investigated with several white rot fungi (Irpex lacteus, Trametes versicolor, Ganoderma lucidum, Polyporellus brumalis, Pleurotus eryngii, Schizophyllum commune) isolated in Korea and two transformants of T. versicolor (strains MrP 1 and MrP 13). I. lacteus degraded 99.4% of 50 mg/l bisphenol A in 3 h incubation and 100% in 12 h incubation. which was the highest degradation rate among the fungal strains tested. T. versicolor degraded 98.2% of 50 mg/l bisphenol A in 12 h incubation. Unexpectedly, the transformant of the Mn-repressed peroxidase gene of T. versicolor, strain MrP 1, degraded 76.5% of 50 mg/l bisphenol A in 12 h incubation, which was a lower degradation rate than wild-type T. versicolor. The removal of bisphenol A by I. lacteus occurred mainly by biodegradation rather than adsorption. Optimum carbon sources for biodegradation of bisphenol A by I. lacteus were glucose and starch, and optimum nitrogen sources were yeast extract and tryptone in a minimal salts medium; however, bisphenol A degradation was higher in nutrient-rich YMG medium than that in a minimal salts medium. The initial degradation of endocrine disruptors was accompanied by the activities of manganese peroxidase and laccase in the culture of I. lacteus.

Effects of Natural Selection, Mutagenesis, and Protoplast Formation and Cell Wall Regeneration on the Production of Aminoglycoside Antibiotics

  • Goo, Yang-Mo;Lim, Hyon-Joo;Lim, Seok-Ran;Kim, Kong-Hwan;Lim, Bun-Sam;Lee, Sae-Bae
    • Archives of Pharmacal Research
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    • 제12권4호
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    • pp.249-253
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    • 1989
  • High producers or blocked mutants of aminoglycoside antibiotic-producing Streptomyces spp. were selected by application of an agar plug method and by culturing individual colonies in broth. The productivities of aminoglycoside antibiotic producing organisms were increased by selection of a high producer from colonies obtained by spreading spores of wild strain, or survived from treatment of a mutagen or from the colonies regenerated from protoplast-formation and cell-wall regenerations. Some mutagen treated colonies lost the ability to produce antibiotics (5-8%). Some A-factor negative and deostreptamine or streptidine negative mutants were obtained by N-methyl-N'-nitro-N-nitrosomethylguanidine (MNNG) treatment. Many of the survivors from the MNNG treatment lost the ability to produce antibiotics. Major colonies produced less amount of antibiotics ; only few survived colonies produced more antibiotics than the parent. Resistance of Streptomyces spp. against the antibiotics produced by itself was also markedly affected by mutagen treatment.

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Xanthomonas oryzae pv. oryzae triggers complex transcriptomic defense network in rice

  • Nino, Marjohn;Nogoy, Franz M.;Song, Jae-Young;Kang, Kwon-Kyoo;Cho, Yong-Gu
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.164-164
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    • 2017
  • High throughput transcriptome investigations of immunity in plants highlight the complexity of gene networks leading to incompatible interaction. To identify genes crucial to resistance against Xanthomonas oryzae pv oryzae, functional genetic analysis of selected differentially expressed genes from our microarray data set was carried out. A total of 13 overexpression vector constructs were made using 35S CaMV promoter which drive constitutive expression in rice. Most of the genes are developmentally expressed especially during maximum tillering stage and are commonly highly expressed in the leaves. When screened against Xoo strain K2, the transgenic plants displayed shorter lesion length compared with wild type Dongjin which indicates partial resistance. The levels of ROS continuously magnified after inoculation which indicates robust cellular sensing necessary to initiate cell death. Elevated transcripts levels of several defense-related genes at the downstream of defense signal network also corroborate the phenotype reaction of the transgenic plants. Moreover, expression assays revealed regulation of these genes by cross-communicating signal-transductions pathways mediated by salicylic and jasmonic acid. These collective findings revealed the key immune signaling conduits critical to mount full defense against Xoo.

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Overexpression of twin-arginine translocation (TAT) pathway conferred immunity to Xanthomonas oryzae v. oryzae in rice

  • Nino, Marjohn C.;Song, Jae-Young;Nogoy, Franz Marielle;Kang, Kwon-Kyoo;Cho, Yong-Gu
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.166-166
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    • 2017
  • OsTAT encodes a twin-arginine translocator (TAT) pathway signal protein. It contains a TRANS membrane domain and a chloroplast transit peptide. mRNA transcription profiling of OsTAT1 revealed that it is highly overexpressed in the leaves corroborating reports on its role in chloroplast. Moreover, its level of expression is more pronounced during earlier stages (germination, 3-leaf stage, and maximum tillering) of growth in rice. A lower disease progress curve of bacterial blight is evident in transgenic lines compared with the wild type, Dongjin indicating its involvement in immunity to Xoo. Expression pattern following infection of Xoo strain K2 depicts highest levels at 4 and 8 hour post-inoculation which implies crucial induction of resistance during early response. This study initially reports a new overview on the biological functions of plant's TAT pathway. Further molecular and genetic analyses are underway to provide detailed involvement of OsTAT in disease resistance.

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긴잎돌김 Porphyra pseudolinearis의 엽체형간 18S rDNA 염기서열 상동성 (Sequence Similarity of Nuclear 18S rDNA from Morphologically Different Blades of the Seaweed Porphyra pseudolinearis (Rhodophyta))

  • ;김영대;김명숙;진형주;조지영;최재석;홍용기;김형근
    • 한국수산과학회지
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    • 제33권6호
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    • pp.496-500
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    • 2000
  • Partial fragments of nuclear 185 rDNAs from morphologically wide and narrow thalli of the seaweed Porphyra pseudolineazis were amplified and sequenced to compare their DNA homology. Both sequences of 311 base pairs showed $100{\%}$ identical each other. They showed $97.7{\%}$ similarity with a wild strain collected at Sodol in Kangwondo, and $99.4{\%}$ similarity with the GenBank accession number AB013185 of the Japanese P. pseudolinearis. Thus the morphological difference of wide and narrow blades might not be a classification criterion for the sub-species level of P. pseudolinearis.

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Continuous Production of Lactosucrose by Immobilized Sterigmatomyces elviae Mutant

  • Lee, Jong-Ho;Lim, Jung-Soo;Park, Chul-Hwan;Kang, Seong-Woo;Shin, Hyun-Yong;Park, Seung-Won;Kim, Seung-Wook
    • Journal of Microbiology and Biotechnology
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    • 제17권9호
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    • pp.1533-1537
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    • 2007
  • In this study, in order to develop a continuous production process of lactosucrose in a packed-bed reactor, Sterigmatomyces elviae ATCC 18894 was selected and mutated. The mutant strain of S. elviae showed 54.3% higher lactosucrose production than the wild type. Reaction conditions such as temperature, pH, substrate concentration and flow rate were also optimized. Under optimized reaction conditions ($50^{\circ}C$, pH 6.0, 25% sucrose and 25% lactose as substrate, flow rate 1.2 ml/min), the maximum concentration of lactosucrose (192 g/l) was obtained. In a packed-bed reactor, continuous production of lactosucrose was performed using S. elviae mutant immobilized in calcium alginate, and about 180 g/l of lactosucrose production was achieved for 48 days.

Chaperone Assisted Overexpression of D-carbamoylase Independent of the Redox State of Host Cytoplasm

  • Sareen, Dipti;Sharma, Rakesh;Vohra, Rakesh M.
    • 한국미생물생명공학회:학술대회논문집
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    • 한국미생물생명공학회 2001년도 Proceedings of 2001 International Symposium
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    • pp.62-72
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    • 2001
  • The N-carbamoyl-D-amino acid amidohydrolase (D-carbamoylase) gene (dcb) from Agrobacterium tumefaciens AM 10 has been successfully cloned and expressed in Escherichia coli. Expression of D-carbamoylase gene under the 17 promoter in different host strains showed that the optimal expression was achieved in E. coli JM109 (DE3) with a 9-fold increase in enzyme production compared to the wild-type strain. The co-expression of the GroEL/ES protein with D-carbamoylase protein caused an in vivo solubilization of D-carbamoylase in an active form. The synergistic effect of GroEL/ES at 28$^{\circ}C$ led to 60 % solubilization of the total expressed target protein with a 6.2-fold increase in enzyme activity in comparison to that expressed without GroEL/ES and 43-fold increase in enzyme activity compared to A. tumefaciens AM 10. Attempts to express D-carbamoylase in an altered redox cytoplasmic milieu did not improve the enzyme production in an active form. The Histidyl-tagged D-carbamoylase was purified in a single step by Nickel-affinity chromatography and was found to have a specific activity of 9.5 U/mg protein.

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