• Korean Journal of Agricultural Science
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• v.47 no.1
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• pp.173-182
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• 2020

Human Astrovirus (HuAstV), known as a waterborne virus, is a group IV positive-sense single-stranded RNA that belongs to Astroviridae. The first outbreak of HuAstV was reported in England in 1975. HuAstV can exist not only among clinical patients but also in various water environments, such as water for agriculture and vegetables. For diagnosis of HuAstV from water samples, a polymerase chain reaction (PCR) system has been developed. However, the PCR-based diagnostic method has problems in field application, such as reaction time, sensitivity and specificity. For this reason, in this study we developed the loop-mediated isothermal amplification assay (LAMP) system, aimed specifically at HuAstV. Three prepared LAMP primer sets were tested by specificity, non-specificity and sensitivity; one LAMP primer set was selected with optimum reaction temperature. The developed LAMP primer set reaction conditions were confirmed at 62℃, and detection sensitivity was 1 fg/μL. In addition, restriction enzyme HaeIII (GG/CC) was introduced to confirm that the LAMP reaction was positive. As a result, selected LAMP primer set was 100 - 1000 times more specific, rapid, and sensitive than conventional-nested PCR methods. For verification of the developed LAMP assay, twenty samples of cDNA from groundwater samples were tested. We expect that the developed LAMP assay will be used to diagnose HuAstV from various samples.

• Journal of Korean Society of Water and Wastewater
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• v.25 no.5
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• pp.627-634
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• 2011

In the present study, the flow behaviors of square jets surface discharged and submerged discharged into shallow water were each simulated using computational fluid dynamics, and the results were compared. As for the verification of the models, the results of the hydraulic experiment conducted by Sankar, et al. (2009) were used. According to the results of the verification, the present application of computational fluid dynamics to the flow analysis of square jets discharged into shallow water was valid. As for the wall jet, which is one form of submerged discharges, at the bottom wall boundary, the peak velocity of the jet rapidly moved from the center of the jet to the bottom wall boundary due to the restriction of jet entrainment and the no-slip condition of the bottom wall boundary, and, as for the surface discharge, because jet entrainment is limited on the free water surface, the peak velocity of the jet moved from the center of the jet to the free water surface. This is because jet entrainment is restricted at the bottom wall boundary and the surface so that the momentum of the central core of the jet is preserved for considerable time at the bottom wall boundary and the surface. In addition, due to the effect of the bottom wall boundary and the free water surface, the jet discharged into shallow water had a smaller velocity diminution rate near the discharge outlet than did the free jet; at a location where it was so distant from the discharge outlet that the vertical profile of the velocity was nearly equal (b/x =20~30), moreover, it had a far smaller velocity diminution rate than did the free jet due to the effect of the finite depth.

• The Journal of Engineering Geology
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• v.20 no.2
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• pp.169-181
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• 2010

This study aimed at simulating several responses to stresses caused by the ground water level variations around the K-1 oil stockpile. For this simulation, we considered the characteristic hydrogeological condition including the special occurrence of long and thick acidic dyke, which is regarded as the main geological structure dominating the ground water flow system at this study area. We activated twenty-four imaginary wells which are located in northern and southern area around central K-1 site. Each neighboring distance is altogether 300 m and whole distance between K-1 site and remote wells is 1,200 m. Through the modeling, we operated the long-term and continuous pumping tests and finally categorized five zones based on maximum pumping rates for the imaginary wells; zone I within 300 meter distance from K-1 site with a pumping rate of 50 $m^3/day$; zone II between 300 to 600 meter distance from K-1 site with a pumping rate of 75 $m^3/day$; zone III between 600 to 900 meter distance from K-1 site with 150 $m^3/day$; zone IV between 900 to 1,200 meter distance from K-1 site with 300 $m^3/day$; and zone V of acidic dyke area. At zone V, especially because of their possibility of high transmissivity for groundwater flow, it is necessary to control and restrict groundwater discharge.

• Journal of Microbiology and Biotechnology
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• v.19 no.10
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• pp.1230-1237
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• 2009

The selective plugging strategy of Microbial Enhanced Oil Recovery (MEOR) involves the use of microbes that grow and produce exopolymeric substances, which block the high permeability zones of an oil reservoir, thus allowing the water to flow through the low permeability zones leading to increase in oil recovery. Bacillus licheniformis TT33, a hot water spring isolate, is facultatively anaerobic, halotolerant, and thermotolerant. It produces EPS as well as biosurfactant and has a biofilm-forming ability. The viscosity of its cell-free supernatant is $120\;mPa{\cdot}s$ at $28^{\circ}C$. Its purified EPS contained 26% carbohydrate and 3% protein. Its biosurfactant reduced the surface tension of water from 72 to 34 mN/m. This strain gave $27.7{\pm}3.5%$ oil recovery in a sand pack column. Environmental scanning electron microscopy analysis showed bacterial growth and biofilm formation in the sand pack. Biochemical tests and Amplified Ribosomal DNA Restriction Analysis confirmed that the oil recovery obtained in the sand pack column was due to Bacillus licheniformis TT33.

• Environmental Engineering Research
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• v.14 no.1
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• pp.53-60
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• 2009

The main objective was to develop and assess a dynamic fate and transport model for lead in air, soil, sediment, water and vegetation. Daejeon was chosen as the study area for its relatively high contamination and emission levels. The model was assessed by comparing model predictions with measured concentrations in multi-media and atmospheric deposition flux. Given a lead concentration in air, the model could predict the concentrations in water and soil within a factor of five. Sensitivity analysis indicated that effective compartment volumes, rain intensity, scavenging ratio, run off, and foliar uptake were critical to accurate model prediction. Important implications include that restriction of air emission may be necessary in the future to protect the soil quality objective as the contamination level in soil is predicted to steadily increase at the present emission level and that direct discharge of lead into the water body was insignificant as compared to atmospheric deposition fluxes. The results strongly indicated that atmospheric emission governs the quality of the whole environment. Use of the model developed in this study would provide quantitative and integrated understanding of the cross-media characteristics and assessment of the relationships of the contamination levels among the multi-media environment.

• KCID journal
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• v.17 no.2
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• pp.17-27
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• 2010

In order to manage the water quality in reservoir, it is necessary to understand the temporal and spatial variation of reservoirs and to classify the reservoirs. In this research, agricultural reservoirs are classified according to physical characteristics (depth, residence time, shape of the reservoir etc) and water quality using multivatriate analysis (PCA and CA). CA (Cluster Analysis) method classify reservoirs into several groups as a similarity of the reservoirs, but it is difficult to indicate a full list to the one table. In case of PCA (Principle Component Analysis) method, it has the advantage for the classification on the reservoirs depending on the water quality similarity and also it is useful to analyze the relationship between related factors through correlation analysis. However PCA is limited to classify into several groups based on the characteristics of the reservoirs and each user should be classified as randomly subjective according to the relative position of the reservoir in the figure. In conclusions, compared to conventional reservoirs classification methods, both CA and PCA methods are considered to be a classification method that describes the nature of the reservoir well, but classification results has a restriction on use, so further research will be needed to complement.

• The Plant Pathology Journal
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• v.20 no.2
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• pp.131-134
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• 2004

A strain of Cucumber mosaic virus (CMV) was isolated from a weed, water chickweed (Stellaria aquatica), growing in the pepper field in Chunchon, Korea. This isolate, CMV-Sa, was differentiated from other CMVs based on biological properties and nucleotide sequence analysis of the coat protein (CP) gene. CMV-Sa showed different reactions to all the tested plants, except Capsicum annuum and Cucumis sativus, when compar-ed with those of CMV-Mf (subgroup I) and CMV-PaFM (subgroup II). Remarkably, in Nicotiana tabacum cvs. Samsun, Xanthi-nc and Ky-57, CMV-Sa induced local necrotic ring spots on the inoculated leaves and venal wave pattern and mosaic on the upper leaves. RNA analysis, serology, and RT-PCR of CP gene showed that CMV-Sa belonged to subgroup I of CMV. However, restriction enzyme analysis of the cDNA using AluI, HhaI, HincII, HindIII, HinfI and MspI showed that CMV-Sa was distinct from that of CMV-Mf. Based on comparison of the nucleotide of CP gene and deduced amino acid sequences between other CMV strains, CMV-Sa was closely related to CMV-Mf with 93.7% and 97.2 % identity, respectively.

• Journal of the Korea Institute of Building Construction
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• v.15 no.2
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• pp.169-175
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• 2015

Recently, a stone is preferred as a cladding materials because of its outstanding durability and luxurious character. However, because of running out of natural resources and restriction of production, it is expected that difficulty of stable supply, and thus alternative cladding materials for concrete wall is needed. Therefore, in this research, as an alternative cladding materials, exposed-aggregate concrete is studied using saccharin based retarder. For evaluating factors, changing water-to-cement ratio, dosages of saccharin-based retarder, and timing of water jet washing were tested on the surface properties of exposed-aggregate concrete. As a result, the most favorable surface performance was obtained at 0.75 day after the placing in 25% of water-to-cement ratio, and at one day after the placing in 35 and 55% of water-to-cement ratio, 1.5 day after the placing in 65% of water-to-cement ratio with $24m{\ell}/m^2$ of retarder application.

• Journal of Korean Society of Water and Wastewater
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• v.26 no.6
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• pp.767-777
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• 2012

Annular Biofilm Reactor (ABR) equipped with coupons of three different pipe materials (STS 304, PVC, PE) was used to generate drinking water biofilm samples. The level of assimilable organic carbon (AOC) during the sample generation period was $37.3{\mu}g/L$, and this level did not seem to be low enough to limit the formation of biofilm in this study. Terminal-restriction fragment length polymorphism (T-RFLP) analyses determined T-RF profile as early as 3 h of exposure on PVC coupons. Average surface roughness ($R_a$) measured by atomic force microscopic analyses was 125.7 nm for PVC, and this value was higher than for STS (71.6 nm) and PE (74.0 nm). However, biofilm formation was faster on STS (6 h) than on PE (12 h), which indicated that surface roughness might not be the only factor that controlled the initiation of biofilm development. Upon detection of the T-RF peaks, richness (S) and diversity indices such as Shannon (H) and Simpson (1/D) demonstrated a rather slow increase until 48 h followed by rapid increase regardless of the pipe materials. Differences of microbial community structures among the biofilm samples were determined based on the cluster analysis using Jaccard coefficients (Sj). Biofilm communities could be divided into two distinct groups according to the exposure time regardless of the pipe materials. First group contained a young (< 48 h) biofilm samples (10 out of 11) but second group contained a mature (${\geq}$ 48 h) samples (11 out of 14). Results suggested that, due to the complexity of biofilm, the targeting of the first group of cluster was crucial for optimizing the management of drinking water distribution systems and controlling microbial growth.

• Journal of the Korean Society of Marine Environment & Safety
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• v.20 no.6
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• pp.640-645
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• 2014

This study aimed to determine the swimming suitability of sea and to suggest methods to address the problems on sea water color and green plants growing on sediment in the artificial created swimming in the beach of southwestern Korea. Sea water samples were collected from January to December of 2010 and analysis for SS, COD, $NH_4{^+}-N$, TP, MPN, sediment IL, ORP and plants on sediment. The results showed that the sea water under the swimming suitability "level of management" based on the relating high levels of SS and TP, but still suitable for swimming on the basis of MPN. Improving exchange seawater flow, dredging, coating and chemical treatment of polluted sediments in addition to removal of point sources and restriction of non point sources in the study area could improve the sea water quality and swimming suitability of the sea.