• Korean Journal of Plant Taxonomy
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• v.45 no.4
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• pp.306-317
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• 2015

This study was conducted to address the taxonomic status of the Korean endemic species Saxifraga octopetala, which is sometimes considered conspecific to Micranthes manchuriensis. Extensive molecular phylogenetic analysis using nrITS sequences as well as morphological examination of type specimens of the two species were undertaken to ascertain the phylogenetic position and species delimitation of S. octopetala. In the resulting nrITS trees, a total of 65 accessions representing S. octopetala grouped together and nested within the Micranthes clade, exhibiting a close relationship with M. nelsoniana and M. manchuriensis. Multiple accessions of M. manchuriensis collected from China and Russia also formed a clade, showing a sister group relationship with M. nelsoniana var. pacifica and M. fusca. The ambiguous species entity of S. octopetala is thought to have originated from Nakai's misinterpretation of Wilford's collection (type specimens of M. manchuriensis), which is a complex collection including an inflorescence of M. nelsoniana. In spite of apparent morphological similarity between S. octopetala and M. manchuriensis, they differ in the presence and absence of underground stolons. The distinct position of S. octopetala within the Micranthes clade on the nrITS tree suggests that it should retain species status in Micranthes. Thus a new combination (Micranthes octopetala) is proposed.

• Korean Journal of Plant Taxonomy
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• v.45 no.4
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• pp.332-352
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• 2015

The tribe Neillieae, a small group of about 18 species in the Rosaceae, comprises three taxonomically difficult genera, Neillia, Physocarpus, and Stephanandra. The tribe, characterized by lobed leaves with persistent or deciduous stipules and ovoid, shiny seeds with copious endosperm, is strongly supported as a monophyletic group by a variety of lines of molecular evidence. Due to the high amount of morphological variation across the three genera and the species in tribe Neillieae, conflicting classification schemes and numerous species have been proposed over the past three centuries. However, no comprehensive systematic study of the group, including all species across their geographic ranges, has ever been undertaken. As part of a taxonomic revision of tribe Neillieae, a revision of Physocarpus based on the morphological examination of herbarium specimens, including types, and field observation is presented. Artificial keys, comprehensive nomenclatural treatments, descriptions, distribution maps, and lists of specimens examined are provided. Six species in Physocarpus are recognized. A lectotype is here designated for the following species: Opulaster pubescens, Opulaster ramaleyi, Spiraea opulifolia var. parvifolia, Spiraea opulifolia var. tomentella, Physocarpus michiganensis, and Physocarpus missouriensis.

• Journal of Life Science
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• v.25 no.3
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• pp.323-328
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• 2015

The study of microbial diversity and richness in soil samples from a volcanic island named Ulleungdo, located east of South Korea. The soil bacterial communities on the Ulleungdo were analyzed using pyrosequencing method based on 16S rRNA gene. There were 1,613 operational taxonomic units (OUT) form soil sample. From results of a BLASTN search against the EzTaxon-e database, the validated reads (obtained after sequence preprocessing) were almost all classified at the phylum level. Proteobacteria was the most dominant phylum with 48.28%, followed by acidobacteria (26.30%), actionbacteria (6.89%), Chloroflexi (4.58), Planctomycetes (4.56%), Nitrospirae (1.83%), Bacteroidetes (1.51%), Verrucomicrobia (1.48%), and Gemmatimonadetes (1.11%). α-proteobacteria was the most dominant class with 36.07% followed by Acidobacteria_c (10.65%), Solibacteres (10.64%), δ-proteobacteria (4.42%), γ-proteobacteria (4.29%), Planctomycetacia (4.16%), Actinobacteria_c (4.00%), Betaproteobacteria (3.50%), EU686603_c (2.97%), Ktedonobacteria (2.91%), Acidimicrobiia (1.32%), Verrucomicrobiae (1.27%), Gemmatimonadetes_c (1.11%), Sphingobacteria (1.09%), and GU444092_c (1.06%). Bradyrhizobiaceae was the most dominant family with 22.83% followed by Acidobacteriaceae (10.62%), EU445199_f (5.72%), Planctomycetaceae (4.03%), Solibacteraceae (3.63%), FM209092_f (3.58%), Steroidobacter_f (2.81%), EU686603_f (2.73%), Hyphomicrobiaceae (2.33%), Ktedonobacteraceae (1.75%), AF498716_f (1.46%), Rhizomicrobium_f (1.03%), and Mycobacteriaceae (1.01%). Differences in the diversity of bacterial communities have more to do with geography than the impact on environmental factors and also the type of vegetation seems to affect the diversity of bacterial communities.

• Korean Journal of Food Science and Technology
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• v.27 no.4
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• pp.506-515
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• 1995

The cultural characteristics of 60 strains of psychrotrophic lactic acid bacteria which were isolated from kimchi, a Korean traditional fermented vegetable food, and identified as Leuconostoc mesenteroides subsp. mesenteroides, Leu. mesenteroides subsp. dextranicum, Leu. paramesenteroides, Leu. lactis, Lactobacillus bavaricus and Lac. homohiochii were tested. All strains grew at $5^{\circ}C,\;10^{\circ}C\;and\;37^{\circ}C$ in tomato glucose broth, but not at $45^{\circ}C$. The optimum growth temperature of Leu. mesenteroides and Lactobacillus sp. were $33{\sim}34^{\circ}C\;and\;34{\sim}36^{\circ}C$, respectively. All strains of Leu. mesenteroides and Lactobacillus sp. grew at 4.8 and 4.2 of initial pH, but not at 4.0. The final pH of Leu. mesenteroides and Lactobacillus sp. in glucose broth were $3.84{\sim}4.10\;and\;3.82{\sim}3.99$, respectively. None of the 60 strains clotted milk nor reduced litmus in litmus milk. All strains of Leu. mesenteroides and Lactobacillus sp. grew in tomato glucose broth containing 7% ethanol or 6.5% NaCl, but not in the broth containing 15% ethanol or 10% NaCl. All strains grew in tomato glucose broth containing 40% bile juice and survived in the artificial gastric juice of pH 3.5. Furthermore, all strains of Leu. mesenteroides survived in the artificial gastric juice of pH 3.0. Since many strains of lactic acid bacteria tested in this study showed differences in several physiological characteristics from those described in Bergey's Manual of Systematic Bacteriology, it was considered that further tests would be necessary to clarify their positions in taxonomic system.

• Korean Journal of Food Science and Technology
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• v.27 no.4
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• pp.495-505
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• 1995

The purpose of this study was to identify the psychrotrophic lactic acid bacteria isolated from kimchi, a Korean traditional fermented vegetable food. Thirty isolates of psychrotrophic lactic acid bacteria were isolated randomly from kimchi-A and kimchi-B which were fermented at $5{\sim}7^{\circ}C$ for 20 days and 50 days, respectively. Among 30 isolates of lactic acid bacteria isolated from kimchi-A, 14 isolates were identified as Leuconostoc mesenteroides subsp. mesenteroides, 12 as Leuconostoc mesenteroides subsp. dextranicum and 4 as Lactobacillus bavaricus. Among 30 isolates isolated from kimchi-B, 20 isolates were identified as Lactobacillus bavaricus, 3 as Leuconostoc mesenteroides subsp. mesenteroides, 3 as Leuconostoc lactis, 2 as Leuconostoc paramesenteroides and 2 as Lactobacillus homohiochii. Though these strains were identified as above, there were many strains whose sugar fermenting patterns and $NH_3$ producing ability from arginine were inconsistent with those described in Bergey's Manual of Systematic Bacteriology, and some strains identified as Leuconostoc mesenteroides subsp. mesenteroides and Leuconostoc mesenteroides subsp. dextranicum even disclosed such contradictions as the comparisons of sugar fermenting patterns between the strains of different subspecies were much more coincident than those between the same subspecies. As there were difficulties in classifying these psychrotrophic lactic acid bacteria according to the current taxonomic system, further studies were needed to solve these problems.

• Korean Journal of Plant Taxonomy
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• v.37 no.3
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• pp.239-254
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• 2007

A comparative micromorphological study was examined on the leaves of the genus Glechoma and related genera (Nepetinae, Lamiaceae) by scanning electron microscopy (SEM) in order to evaluate their significance in the taxonomy. The leaves of taxa Marmoritis, Nepeta sect. Glechomanthe, G. hederacea var. longituba (Korea) are revealed amphistomatic type, while the remnants of taxa had hypostomatic type. The size range of the guard cells is $12.50-28.75{\times}9.17-21.25{\mu}m$: the smallest one was found in M. pharicus ($12.50-15.83{\times}9.17-11.25{\mu}m$), while the largest one was measured to G. hederacea var. longituba (Korea: $28.75-28.88{\times}21.25-21.38{\mu}m$). The stomatal type of genera Agastache, Dracocephalum was mostly diacytic, however for the rest rarely together with anisocytic and anomocytic, except G. hederaca var. longituba (Korea), Meehania urticifolia by having combined with diacytic and anomocytic. The shapes of epidermal cells are differ from in abaxial and adaxial side, and dived with two types (e.g., platelet, stripe pattern). Five types (three glandular, two non-glandular hairs) of trichomes are distributed in leaves. Among trichomes, long and stalk capitates glandular trichome, subsessile glands are different from studied taxa so that leaf micromorphological characters are significance features in the taxonomy.

• Korean Journal of Ichthyology
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• v.30 no.2
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• pp.75-83
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• 2018

This study is to observe species identification and early life history of Korean endemic species of Tanakia latimarginata and to use it as a basis for taxonomic studies. As a result of morphological identification, a dark band appeared at the margin of the anal fin, and the ovipositor color of the female was light orange. The shape of the egg was fusiform and sticky. The egg size (long${\times}$short diameter) averaged $4.41{\times}1.44mm$. The incubation time was 126 hours after the fertilization at an average water temperature of $21.0^{\circ}C$. Immediately after hatching, the larvae had egg yolk at an average total length of $5.91{\pm}0.18mm$ (n=5). At 18 days after hatching, the trunk fur was developed in the caudal fin with an average total length of $8.02{\pm}0.08mm$ (n=5). At 41 days after hatching, the larvae absorbed egg yolk at an average total length of $8.70{\pm}0.23mm$ (n=5). At 80 days after hatching, the average length of the fins was $12.6{\pm}0.28mm$ (n=5). The number of fin of the dorsal fin was iii.8, the anal fin iii.9~10, the caudal fin 19, lateral line scales 32~35 were similar to their brood stork.

• Korean Journal of Ichthyology
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• v.31 no.4
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• pp.214-221
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• 2019

This study suggests basic data for taxonomic research among similar species by observing osteological development of larvae of Hemibarbus longirostris. Newly hatched yolk-sac larvae were 8.10±0.02 mm (n=5) in mean total length, and frontal, parasphenoid, and basioccipital in the cranium were ossified. On the 6 days after hatching, flexion-larvae were 10.9±0.26 mm (n=5) in mean total length, hyomandibular, sympletic, and ectopterygoid in the cranium were ossified. On the 12 days after hatching, post-larvae were 12.2±0.55 mm (n=5) in mean total length, interopercle in operculum region and postclavicle in shoulder girdle bone were ossified. On the 25 days after hatching, post-larvae were 16.1±0.27 mm (n=5) in mean total length, epihyal and interhyal in hyoid arch, two epural in caudal skeleton, interneural processes, and interhaemal processes were ossified. On the 40 days after hatching, juvenile were 27.9±3.74 mm (n=5) in mean total length, all skeletal development completed with hypural bone in the caudal skeleton region fused in three forms (1, 2+3, 4+5).

• Korean Journal of Plant Taxonomy
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• v.33 no.3
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• pp.227-253
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• 2003

Morphological characters of C. kobomugi, C. gibba, C. echinata. C. remotiuscula. C. maakii. C. curta, and C. loliacea of genus Carex were rexamined. The epidermal patterns of perigynium, achene and leaf were investigated using by a scanning electron microscope(SEM) and a light microscope(LM). Morphological characters. such as length and width of stem and leaf, sheath, bract, spike, scale, perigynium, beak of perigynium, length of spike peduncle, size, and frequency of stomatal complex of leaf, number of bract, shape of stem transection, scale and apex of scale, beak and base of perigynium, achene, epidermal cell and cell wall of perigynium, achene, leaf epidermal patterns (fundamental epidermal cell and cell wall, silica body, subsidiary cell), hair, papillae, prickle present/absent of perigynium and leaf were useful for the identification of observed seven taxa. Examined six taxa of section Macrocephalae, Gibbae, Stellulatae, Elongatae, Ovales, and Heleonates were distint from each other with respect of length and width stem, leaf, bract, perigynium, perigynium beak, lenght of spike peduncle, perigynium, and leaf. A key based on data was presented here.

• Korean Journal of Plant Taxonomy
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• v.47 no.2
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• pp.154-160
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• 2017

The Korean plant names Changpo and Sukchangpo, including their related names Suchangpo and Kyeson, were somewhat confusingly used in both the Korean classics and even now. To clarify these names, the names written in the Chinese classics and the Korean classics were examined closely and compared to those of the modern flora of China and Korea. In the Chinese classics, Changpo and Sukchangpo were considered as conspecific with Acorus calamus, which has leaves with distinct veins, whereas Sukchangpo and Kyeson have leaves without distinct veins and are considered as A. gramineus. However, in the Korean classics, these names have been confusingly used thus far. Sukchangpo and Gyeson were considered as A. gramineus, and Sukchangpo and Changpo were considered as A. calamus, erroneously. Therefore, the following corrections are needed: plants having distinct leaf veins were named Changpo (A. calamus), and plants having vague leaf veins were named Sukchangpo (A. gramineus), and the names of Sukchangpo and Kyeson should be discarded to avoid confusion. In addition, to respond to the Convention on Biological Diversity, we propose a study to clarify the taxonomic identities of the plant names written in Chinese script and an examination of the Korean plant names listed in the Korean classics.