• Title/Summary/Keyword: Strain Type

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Molecular Typing of Legionella pneumophila Isolated in Busan, Using PFGE (부산지역에서 분리한 레지오넬라균에 대한 PFGE를 이용한 molecular typing)

  • Park Eun-Hee;Kim Mi-Hee;Kim Joung-A;Han Nan-Sook;Lee Ju Hyeoun;Min Sang Gi;Park Yon Koung;Jin Seong Hyun;Jeong Gu Young;Bin Jae Hun
    • Journal of Life Science
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    • v.15 no.2 s.69
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    • pp.161-168
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    • 2005
  • In this study, we did the molecular typing of 39 environmental Legionella pneumophila serogroup 1 isolates collected from 2001-2003 in Busan using the pulsed-filed gel electrophoresis (PFGE). PFGE of SfiI fragments were divided into 10 pulsotypes $(A\~J)$, corresponding to $<65\%$ similarity and a subtype within each pulsotype was characterized by $>84\%$ similarity. The major cluster was pulsotype E $(46.2\%)$, which included 18 isolates and was divided into 4 subtypes $(E1\~E4)$. PFGE of NotI fragments were divided into 8 pulsotypes $(a\~h)$, corresponding to $<60\%$ similarity and a subtype within each pulsotype was characterized by $100\%$ similarity. The major cluster was pulsotype f $(38.5\%)$, which included 15 isolates. The ATCC type strain L. pneumophila serogroup 1 was identified as a different molecular pulsotype compare to the Busan isolates. It is possible that L. pneumophila serogroup 1 isolated in Busan with specific DNA pattern is comparable with those isolation in other cities in Korea.

Genotyping, Phage Typing, and Antimicrobial Resistance of Salmonella Typhimurium Isolated from Pigs, Cattle, and Humans

  • Ju, Min-Seok;Kang, Zheng-Wu;Jung, Ji-Hun;Cho, Seong-Beom;Kim, Sung-Hun;Lee, Young-Ju;Hong, Chong-Hae;Pak, Son-Il;Hahn, Tae-Wook
    • Food Science of Animal Resources
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    • v.31 no.1
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    • pp.47-53
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    • 2011
  • Salmonella enterica serovar Typhimurium (ST) is one of the most common serovars isolated from humans and animals. It has been suggested that ST infections in Koreans are largely due to the consumption of contaminated pork and beef. To investigate the genotypes, phage types, and antimicrobial resistance patterns for ST isolates of different origins, a total of 70 ST strains, including 19 isolates from humans, 44 isolates from pigs, and 6 isolates from cattle, were analyzed using pulsedfield gel electrophoresis (PFGE), phage typing, and antimicrobial susceptibility tests. Forty-three distinct PFGE patterns were generated from 70 ST isolates, which were grouped into 14 PFGE groups (from A to N) at the level of 75% similarity. The most prevalent group was the A (A1-A17 subtypes) group, encompassing 54.5% (38/70) of ST isolates. ST isolates from pigs and cattle mostly belong to groups A and L, whereas ST isolates from humans mostly belong to groups F and C. Antimicrobial susceptibility tests using 11 antimicrobial agents showed that resistance to tetracycline (TE) (81.4%) was highly prevalent, followed by streptomycin (S) (64.3%) and nalidixic acid (NA) (31.4%) resistance. A total of seventeen antimicrobial resistance patterns were observed. Only 8.6% of isolates, including a reference strain, were susceptible to all antimicrobial agents tested. The most prevalent resistance pattern was TE-S (37.1%), which was seen in 66.6% of bovine, 40.8% of swine and 21.1% of human isolates. Three ST isolates from humans (15.9%) showed resistance to 7-8 antimicrobials. The most predominant phage type (PT) was U302 (64.3%), followed by DT170 (10.0%). PFGE types did not coincide with antimicrobial resistance patterns and phage types; therefore, the combination of those types allowed for further differentiation between tested ST isolates.

A Study on the Stability of Deep Tunnels Considering Brittle Failure Characteristic (취성파괴특성을 고려한 심부터널의 안정성 평가기법 연구)

  • Park, Hyun-Ik;Park, Yeon-Jun;You, Kwang-Ho;Noh, Bong-Kun;Seo, Young-Ho;Park, Chan
    • Tunnel and Underground Space
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    • v.19 no.4
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    • pp.304-317
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    • 2009
  • Most crystalline rocks have much higher compressive strength than tensile strength and show brittle failure. In-situ rock mass, strong enough in general sense, often fails in brittle manner when subjected to high stress exceeding strength in due of geometrically induced stress concentration or of high initial stress. Therefore, it is necessary to verify the brittle failure characteristics of rock and rock mass for proper stability assessment of underground structures excavated in great depths. In this study, damage controlled tests were conducted on biotite-granite and granitic gneiss, which are the two major crystalline rock types in Korea, to obtain the strain dependency characteristics of the cohesion and friction angle. A Cohesion-Weakening Friction-Strengthening (CWFS hereafter) model for each rock type was constructed and a series of compression tests were carried out numerically while varying confining pressures. The same tests were also conducted assuming the rock is Mohr-Coulomb material and results were compared.

Evaluation of Mechanical Performance of a Segment Lining coated by a Sprayed Waterproofing Membrane by a Full-scale Loading Test (실물 재하실험에 의한 뿜칠 방수 멤브레인이 타설된 세그먼트 라이닝의 역학적 성능 평가)

  • Kang, Tae-Ho;Choi, Soon-Wook;Lee, Chulho;Park, Byungkwan;Kim, Jintae;Choi, Myung-Sik;Chang, Soo-Ho
    • Tunnel and Underground Space
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    • v.28 no.1
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    • pp.97-110
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    • 2018
  • The application of sprayed waterproofing membrane with high adhesion and ductility is considered to be promising as a measure for repair and reinforcement of a tunnel structure. Therefore, a powder-type and one-component membrane prototype with high tensile and bond strengths was made in this study. Then, its reinforcement effect on a shield segment was evaluated by carrying out a series of full-scale loading tests of segment specimens on which the membrane was sprayed. From the tests, it was confirmed that the initial cracking loads increased by approximately 34% due to cracking retardation by membrane coating. Even though the increase of failure loads were not so high as cracking loads, the strain-softening behaviors were observed from specimens coated by the membrane. Therefore, it is expected that the membrane coated on the inner surface of a lining might be effective in preventing its brittle failure.

Characterization and Isolation of Mutants Involved in Cell Cycle Progression and Regulation in Saccharomyces cerevisiae (Saccharomyces cerevisiae에서 세포주기의 진행과 조절에 관련된 변이주들의 분리 및 특성화)

  • 박정은;임선희;선우양일
    • Korean Journal of Microbiology
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    • v.37 no.1
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    • pp.28-36
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    • 2001
  • These studies were carried out to understand the mechanisms of genes which are related in cell cycle progression at G1/S phase. Mutants involved in cell cycle progression and regulation in Saccharomyces cerevisiae were isolated and characterized. To isolate new mutants, we screened the sensitivity to ciclopirox olamine (CPO) which inhibits the cell cycle traverse at or very near the G1/S phase boundary in HeLa cell and budding yeast. As results, we isolated 30 mutants and named cos(ciclopirox olamine sensitivity: cos27∼cos57) mutants. To determine the phenotype of mutants, we examined the sensitivity to methyl-methane sulfonate (MMS) and hydroxyurea (HU). Several mutants were sensitive to MMS and HU. According to these Phenotypes, cos mutants were grouped into four. Group I mutants are cos27, cos28, cos32, cos33, cos36, cos37, cos40, cos42, cos46, cos50, cos52 and cos53 which show MMS, HU sensitivities and might act at a checkpoint pathway during S phase. Group II mutants are cos43 and cos48 which show MMS sensitivities and might act at a checkpoint pathway during Gl or G2 phase. Group III mutants are cos35, cos47, cos54, cos55 and cos56 which show HU sensitivities and might act at a progress pathway during S phase. Finally, Group IV mutants are cos29, cos30, cos31, cos34, cos38, cos39, cos41, cos44, cos45, cos49, cos51 and cos57 which show only CPO sensitivities. Moreover, we examined the terminal phenotype of mutants under fluorescent microscope and then found one of S phase checkpoint related mutant(cos37). Furthermore, we constructed the heterozygote strain between mutant and wild type haploid strains to study their genetic analysis of cos mutants.

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Cloning and Expression of Escherichia coli Ornithine Transcarbamylase Gene, argI (Escherichia coli 오르니틴 트란스카바밀라제의 유전자 argI의 클로닝 및 발현)

  • Riu, Key-Zung;U, Zang-Kual;Ko, Young-Hwan;Kim, Chan-Shik;Song, Sung-Jun;Oh, Young-Seon;Lee, Sun-Joo
    • Applied Biological Chemistry
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    • v.38 no.2
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    • pp.118-122
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    • 1995
  • Escherichia Coli ornithine transcarbamylase is the enzyme which catalyzes the L-citrulline biosynthesis from L-ornithine and carbamyl phosphate. To facilitate the purification of enzyme which will be used for many biochemical studies such as structure and function relationships and catalytic mechanisms, the cloning and expression of E. coli argI gene for ornithine transcarbamylase was conducted. argI was amplified from genomic DNA of E. coli strain of $DH5{\alpha}$, by polymerization chain reaction (PCR) method. The amplified argI gene was ligated to the prokaryotic expression vector pKK223-3 and used for transformation of E. coli TB2 which was deficient of ornithine transcarbamylase. The over-produced enzyme by the tnansformant was purified by ammonium sulfate fractionation, heat denaturation and affinity chromatography. The result of SDS denaturation gel electrophoresis for the purified enzyme showed a single band of about 38 kDa of ornithine transcarbamylase. Kinetic data for the expressed enzyme gave almost the s?????? values as those of the wild type enzyme. The $k_{cat}$, of the enzyme was $1.0{\times}10^5min^{-1}$, and $K_ms$ for ornithine and carbamyl phosphate were 0.35 mM and 0.06 mM, respectively.

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Characteristics of A Diaphragm-Type Fiber Optic Fabry-Perot Interferometric Pressure Sensor Using A Dielectric Film (유전체 박막을 이용한 다이아프램형 광섬유 Fabry-Perot 간섭계 압력센서의 특성)

  • Kim, M.G.;Yoo, Y.W.;Kwon, D.H.;Lee, J.H.;Kim, J.S.;Park, J.H.;Chai, Y.Y.;Sohn, B.K.
    • Journal of Sensor Science and Technology
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    • v.7 no.3
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    • pp.147-153
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    • 1998
  • The strain characteristics of a fiber optic Fabry-Perot pressure sensor with high sensitivity using a $Si_{3}N_{4}/SiO_{2}/Si_{3}N_{4}$ (N/O/N) diaphragm is experimentally investigated. A 600 nm thick N/O/N diaphragm was fabricated by silicon anisotropic etching technology in 44 wt% KOH solution. An interferometric fiber optic pressure sensor has been manufactured by using a fiber optic Fabry-Perot intereferometer and a N/O/N diaphragm. The 2 cm length fiber optic Fabry-Perot interferometers in the continuous length of single mode fiber were produced with two pieces of single mode fiber coated with $TiO_{2}$ dielectric film utilizing the fusion splicing technique. The one end of the fiber optic Fabry-Perot interferometer was bonded to a N/O/N diaphragm. and the other end was connected to an optical setup through a 3 dB coupler. For the N/O/N diaphragm sized $2{\times}2\;mm^{2}$ and $8{\times}8\;mm^{2}$, the pressure sensitivity was measured 0.11 rad/kPa and 1.57 rad/kPa, respectively, and both of the nonlinearities were less than 0.2% FS.

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Development of a Flavor-Enriched Yeast Extract with a High Glutathione Content (글루타치온 고함유 정미성 효모추출물 개발)

  • Bae, In-Young;Koo, Seung-Hyun;Yoo, Hyun-Jae;Kim, Jong-Min;Bae, Hyun-Ah;Jeon, Eun-Jung;Oh, Eon;Lee, Dae-Hee;Hur, Byung-Serk;Lee, Hyeon-Gyu
    • Korean Journal of Food Science and Technology
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    • v.42 no.5
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    • pp.549-553
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    • 2010
  • Yeast strains with good sensory properties were selected, and those yeasts were subjected to mutation to develop high glutathione producing yeasts. In addition, the antiradical activity and flavoring effect of the yeast extract were evaluated. A total of 68 strains were screened, and three strains of Saccharomyces utilis, four strains of Candida utilis, and one strain of Zygosaccharomyces rouxii were selected based on the flavoring effect. Among them, a random mutation was elicited against SEM-Y8, resulting in a high flavoring effect and growth rate. The glutathione production by SEM-Y8 increased 2.0-fold following the mutation, and the DPPH radical quenching effect of the SY8-M2-1-derived extract increased 3.2-fold compared to that of the wild type. The sensory properties of the SY8-M2-1-derived extract were better than those of garlic or onion extract in umami and mouthfulness. Thus, the SY8-M2-1 extract could be used as a functional flavoring material with improved antiradical activity.

A Study on the Textile Sensor Applied to Smart Wear for Monitoring Meditation Breathing (명상호흡 모니터링용 스마트의류를 위한 호흡수 측정 직물센서 연구)

  • Hwang, Su Jung;Jung, Yoon Won;Lee, Joo Hyeon
    • Science of Emotion and Sensibility
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    • v.21 no.1
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    • pp.83-90
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    • 2018
  • The purpose of this study is for fundamental research of meditation smart wear for physical and mental healing, and researching method for monitoring phase of meditation through textile by measuring the number of abdominal respiration when meditating. For this purpose, the research implemented Single Wall Carbon Nano-Tube (SWCNT) based strain gauges type textile sensor, considered reliability and validity of respiratory sensing, and analyzed efficiency of respiratory sensing based on body parts comparatively. The first preliminary experiment was to evaluate the performance of textile sensor through abdominal model dummy which open and shut of 5 cm repeatedly for 2 minutes at the rate of 0.1Hz in order to simulate abdominal respiration. It concluded signal efficiency between reference sensor(BIOPAC) and textile respiratory sensor appears statistically significant (p<0.001). The second experiment were conducted with 4 subjects doing abdominal respiration under same conditions, and after comparing the signal values between two sensors from 4 attached locations(around center and sides of omphali and phren), center of omphali and sides of phren were selected as suitable location for measuring meditational breathing as they showed large and stable signals. In result, this research aimed for implementing of the textile sensor for sensing meditational breathing of long respiration cycle, review of reliability and validity for sensing number of meditational respiration with the sensor and consideration of sensing efficiency by sensing location on body parts.

Production and Characterization of Monoclonal Antibodies Specific to PAT Protein Expressed in Genetically Modified Herbicide-Resistance Maize (제초제 내성 유전자 변형 옥수수 중 PAT단백질에 특이한 단크론성 항체의 생산과 특성 확인)

  • Kim, Sol-A;Lee, Jeong-Eun;Shim, Won-Bo;Kang, Sung-Jo;Chung, Duck-Hwa
    • Journal of Food Hygiene and Safety
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    • v.33 no.3
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    • pp.193-199
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    • 2018
  • In this study, PAT protein of genetically modified maize was prepared from the recombinant E. coli strain BL21 (DE3), and mice were immunized with the recombinant PAT protein. After cell fusion and cloning, two hybridoma cells (PATmAb-7 and PATmAb-12) were chosen since the monoclonal antibodies (Mabs) produced by them were confirmed to be specific to PAT protein in the indirect enzyme-linked immunsorbent assay (ELISA) and western blot tests. There were no cross-reactions of either Mabs to other GM proteins or to the extracts of non-GM maize. The ELISA based on the PATmAb-7 can sensitively detect 0.3 ng/g PAT protein in corn. These results indicate that the developed Mabs can be used as bio-receptors in the development of immunosensors and biosensors for the rapid and simple detection of GM corn adulterated in foods.