• Title/Summary/Keyword: Singular value

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Dimensionality Reduction of RNA-Seq Data

  • Al-Turaiki, Isra
    • International Journal of Computer Science & Network Security
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    • v.21 no.3
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    • pp.31-36
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    • 2021
  • RNA sequencing (RNA-Seq) is a technology that facilitates transcriptome analysis using next-generation sequencing (NSG) tools. Information on the quantity and sequences of RNA is vital to relate our genomes to functional protein expression. RNA-Seq data are characterized as being high-dimensional in that the number of variables (i.e., transcripts) far exceeds the number of observations (e.g., experiments). Given the wide range of dimensionality reduction techniques, it is not clear which is best for RNA-Seq data analysis. In this paper, we study the effect of three dimensionality reduction techniques to improve the classification of the RNA-Seq dataset. In particular, we use PCA, SVD, and SOM to obtain a reduced feature space. We built nine classification models for a cancer dataset and compared their performance. Our experimental results indicate that better classification performance is obtained with PCA and SOM. Overall, the combinations PCA+KNN, SOM+RF, and SOM+KNN produce preferred results.

A Study on the Performance Analysis of the Dual-arm Robot for the Assembly Task (조립 공정에서 양팔 로봇의 구조에 따른 작업성 평가 방법 연구)

  • Kim, Gi-Hoon;Park, Dong Il;Park, Jong-Woo;Kim, Hwi-Su;Cho, Youngsoo;Jung, Won-suk
    • The Journal of Korea Robotics Society
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    • v.17 no.2
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    • pp.164-171
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    • 2022
  • Recently, interest of a dual arm robot which can replace humans is increasing in order to improve the working environment and solve the labor shortage. Various studies related with design and analysis of dual-arm robots have been conducted because dual arm robots can have various kinematic configurations according to the objective task. It is necessary to evaluate the work performance according to various kinematic structures of the dual arm robot to maximize its effectiveness. In the paper, the performance analysis is studied according to the shoulder configuration and the wrist configuration of the dual-arm robot by using main performance indices such as manipulability, condition number, and minimum singular value by assigning proper weight values to each objective motion. Performance analysis for the robotic assembly process is effectively carried out for each representative dual arm robot configuration.

Bayesian inference of the cumulative logistic principal component regression models

  • Kyung, Minjung
    • Communications for Statistical Applications and Methods
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    • v.29 no.2
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    • pp.203-223
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    • 2022
  • We propose a Bayesian approach to cumulative logistic regression model for the ordinal response based on the orthogonal principal components via singular value decomposition considering the multicollinearity among predictors. The advantage of the suggested method is considering dimension reduction and parameter estimation simultaneously. To evaluate the performance of the proposed model we conduct a simulation study with considering a high-dimensional and highly correlated explanatory matrix. Also, we fit the suggested method to a real data concerning sprout- and scab-damaged kernels of wheat and compare it to EM based proportional-odds logistic regression model. Compared to EM based methods, we argue that the proposed model works better for the highly correlated high-dimensional data with providing parameter estimates and provides good predictions.

Enhancement of Low Contrast Images using Adaptive Histogram Equalization by the SVD (SVD 에 의한 적응적 히스토그램 평활화를 이용한 저 대비 영상의 화질 향상 기법)

  • Kim, Jongho
    • Proceedings of the Korea Information Processing Society Conference
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    • 2021.11a
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    • pp.963-965
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    • 2021
  • 본 논문에서는 위성 영상과 같은 원격 센싱 영상 등의 저 대비 영상의 화질을 개선하기 위하여 SVD (singular value decomposition)를 이용한 적응적 히스토그램 평활화 기법을 제안한다. 저 대비 영상의 특이값과 히스토그램 평활화 영상의 특이값을 결합하되, 사용자 파라미터를 통해 영상의 화질을 조절할 수 있도록 적응적 화질 개선 기법을 제안한다. 위성 영상을 비롯한 다양한 영상을 대상으로 실험한 결과 제안하는 방법이 기존의 히스토그램 평활화 기법 및 이를 개선한 방법에 비해 GSD (global standard deviation)으로 측정한 객관적 수치 측면에서 우수한 성능을 나타내고, 주관적 화질 측면에서 자연스럽고 영상의 어두운 영역 및 밝은 영역에서의 디테일 보존 성능이 우수함을 확인할 수 있다.

An exercise recommendation system using bayesian network and singular value decomposition algorithm (베이지안 네트워크와 특이값 분해 알고리즘을 이용한 운동 추천 시스템)

  • Shin, A-Young;Lim, Yujin
    • Proceedings of the Korea Information Processing Society Conference
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    • 2021.11a
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    • pp.470-473
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    • 2021
  • 본 논문에서는 코로나-19로 인해 홈 트레이닝 시장이 성장하고 있는 상황 속에서 효율적인 운동을 위해 사용자의 식습관, 신체조건, 선호도 등을 바탕으로 적합한 운동을 추천해주는 시스템을 제안한다. 먼저 K-최근접 이웃 알고리즘을 활용해 비만의 정도에 따라 사용자를 분류하고, 운동 데이터를 소모 칼로리에 따라 클러스터링 한다. 다음으로 비만의 정도와 운동 레벨에 따라 정해진 추천 점수를 통해 사전 선호도 확률을 계산하고, 베이지안 네트워크를 통해 사후 확률을 구한다. 이를 바탕으로 특이값 분해 알고리즘(SVD)를 활용하여 사용자 맞춤형 운동을 추천한다. 제안 시스템의 성능을 검증하기 위해 비교 실험을 진행하여 회귀 문제 평가 척도인 RMSE 값 측면에서 성능을 분석하였다.

$H_{\infty}$ Control of Seeker Scan-Loop using LSDP (LSDP를 이용한 탐색기 주사루프의 $H_{\infty}$ 제어)

  • Lee, Ho-Pyeong;Song, Chang-Seop
    • Journal of the Korean Society for Precision Engineering
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    • v.12 no.1
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    • pp.78-86
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    • 1995
  • $H_{\infty}$ Controller of seeker scan-loop is designed using LSDP proposed by McFarlane. The performance and robustness of $H_{\infty}$ controller are analyzed using robustness theorems by Lehtomaki and compared with those of the LQG/LTR controller. Especially, structured singular value .mu. -test of Doyle is used to evaluate robust performance of seeker scan-loop. It is demonstated that seeker scan-loop by $H_{\infty}$ controller is very robust to model uncertainties described by additive and multiplicative perturbations.

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Strategy of Multistage Gamma Knife Radiosurgery for Large Lesions (큰 병변에 대한 다단계 감마나이프 방사선수술의 전략)

  • Hur, Beong Ik
    • Journal of the Korean Society of Radiology
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    • v.13 no.5
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    • pp.801-809
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    • 2019
  • Existing Gamma Knife Radiosurgery(GKRS) for large lesions is often conducted in stages with volume or dose partitions. Often in case of volume division the target used to be divided into sub-volumes which are irradiated under the determined prescription dose in multi-sessions separated by a day or two, 3~6 months. For the entire course of treatment, treatment informations of the previous stages needs to be reflected to subsequent sessions on the newly mounted stereotactic frame through coordinate transformation between sessions. However, it is practically difficult to implement the previous dose distributions with existing Gamma Knife system except in the same stereotactic space. The treatment area is expanding because it is possible to perform the multistage treatment using the latest Gamma Knife Platform(GKP). The purpose of this study is to introduce the image-coregistration based on the stereotactic spaces and the strategy of multistage GKRS such as the determination of prescription dose at each stage using new GKP. Usually in image-coregistration either surgically-embedded fiducials or internal anatomical landmarks are used to determine the transformation relationship. Author compared the accuracy of coordinate transformation between multi-sessions using four or six anatomical landmarks as an example using internal anatomical landmarks. Transformation matrix between two stereotactic spaces was determined using PseudoInverse or Singular Value Decomposition to minimize the discrepancy between measured and calculated coordinates. To evaluate the transformation accuracy, the difference between measured and transformed coordinates, i.e., ${\Delta}r$, was calculated using 10 landmarks. Four or six points among 10 landmarks were used to determine the coordinate transformation, and the rest were used to evaluate the approaching method. Each of the values of ${\Delta}r$ in two approaching methods ranged from 0.6 mm to 2.4 mm, from 0.17 mm to 0.57 mm. In addition, a method of determining the prescription dose to give the same effect as the treatment of the total lesion once in case of lesion splitting was suggested. The strategy of multistage treatment in the same stereotactic space is to design the treatment for the whole lesion first, and the whole treatment design shots are divided into shots of each stage treatment to construct shots of each stage and determine the appropriate prescription dose at each stage. In conclusion, author confirmed the accuracy of prescribing dose determination as a multistage treatment strategy and found that using as many internal landmarks as possible than using small landmarks to determine coordinate transformation between multi-sessions yielded better results. In the future, the proposed multistage treatment strategy will be a great contributor to the frameless fractionated treatment of several Gamma Knife Centers.

T-Commerce Sale Prediction Using Deep Learning and Statistical Model (딥러닝과 통계 모델을 이용한 T-커머스 매출 예측)

  • Kim, Injung;Na, Kihyun;Yang, Sohee;Jang, Jaemin;Kim, Yunjong;Shin, Wonyoung;Kim, Deokjung
    • Journal of KIISE
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    • v.44 no.8
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    • pp.803-812
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    • 2017
  • T-commerce is technology-fusion service on which the user can purchase using data broadcasting technology based on bi-directional digital TVs. To achieve the best revenue under a limited environment in regard to the channel number and the variety of sales goods, organizing broadcast programs to maximize the expected sales considering the selling power of each product at each time slot. For this, this paper proposes a method to predict the sales of goods when it is assigned to each time slot. The proposed method predicts the sales of product at a time slot given the week-in-year and weather of the target day. Additionally, it combines a statistical predict model applying SVD (Singular Value Decomposition) to mitigate the sparsity problem caused by the bias in sales record. In experiments on the sales data of W-shopping, a T-commerce company, the proposed method showed NMAE (Normalized Mean Absolute Error) of 0.12 between the prediction and the actual sales, which confirms the effectiveness of the proposed method. The proposed method is practically applied to the T-commerce system of W-shopping and used for broadcasting organization.

Design of User Clustering and Robust Beam in 5G MIMO-NOMA System Multicell (5G MIMO-NOMA 시스템 멀티 셀에서의 사용자 클러스터링 및 강력한 빔 설계)

  • Kim, Jeong-Su;Lee, Moon-Ho
    • The Journal of the Institute of Internet, Broadcasting and Communication
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    • v.18 no.1
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    • pp.59-69
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    • 2018
  • In this paper, we present a robust beamforming design to tackle the weighted sum-rate maximization (WSRM) problem in a multicell multiple-input multiple-output (MIMO) - non-orthogonal multipleaccess (NOMA) downlink system for 5G wireless communications. This work consider the imperfectchannel state information (CSI) at the base station (BS) by adding uncertainties to channel estimation matrices as the worst-case model i.e., singular value uncertainty model (SVUM). With this observation, the WSRM problem is formulated subject to the transmit power constraints at the BS. The objective problem is known as on-deterministic polynomial (NP) problem which is difficult to solve. We propose an robust beam forming design which establishes on majorization minimization (MM) technique to find the optimal transmit beam forming matrix, as well as efficiently solve the objective problem. In addition, we also propose a joint user clustering and power allocation (JUCPA) algorithm in which the best user pair is selected as a cluster to attain a higher sum-rate. Extensive numerical results are provided to show that the proposed robust beamforming design together with the proposed JUCPA algorithm significantly increases the performance in term of sum-rate as compared with the existing NOMA schemes and the conventional orthogonal multiple access (OMA) scheme.

Atrial Fibrillation Waveform Extraction Algorithm for Holter Systems (홀터 심전계를 위한 심방세동 신호 추출 알고리즘)

  • Lee, Jeon;Song, Mi-Hye;Lee, Kyoung-Joung
    • Journal of the Institute of Electronics Engineers of Korea SC
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    • v.49 no.3
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    • pp.38-46
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    • 2012
  • Atrial fibrillation is needed to be detected at paroxysmal stage and to be treated. But, paroxysmal atrial fibrillation ECG is hardly obtained with 12-lead electrocardiographs but Holter systems. Presently, the averaged beat subtraction(ABS) method is solely used to estimate atrial fibrillatory waves even with somewhat large residual error. As an alternative, in this study, we suggested an ESAF(event-synchronous adaptive filter) based algorithm, in which the AF ECG was treated as a primary input and event-synchronous impulse train(ESIT) as a reference. And, ESIT was generated so to be synchronized with the ventricular activity by detecting QRS complex. We tested proposed algorithm with simulated AF ECGs and real AF ECGs. As results, even with low computational cost, this ESAF based algorithm showed better performance than the ABS method and comparable performance to algorithm based on PCA(principal component analysis) or SVD(singular value decomposition). We also proposed an expanded version of ESAF for some AF ECGs with multi-morphologic ventricular activities and this also showed reasonable performance. Ultimately, with Holter systems including our proposed algorithm, atrial activity signal can be precisely estimated in real-time so that it will be possible to calculate atrial fibrillatory rate and to evaluate the effect of anti-arrhythmic drugs.