• Title/Summary/Keyword: Sequence number Management

Search Result 130, Processing Time 0.028 seconds

Genetic Diversity and Population Structure of Korean Soybean Landrace [Glycine max(L.) Merr.]

  • Cho, Gyu-Taek;Lee, Jeong-Ran;Moon, Jung-Kyung;Yoon, Mun-Sup;Baek, Hyung-Jin;Kang, Jung-Hoon;Kim, Tae-San;Paek, Nam-Chon
    • Journal of Crop Science and Biotechnology
    • /
    • v.11 no.2
    • /
    • pp.83-90
    • /
    • 2008
  • Two hundred and sixty Korean soybean landrace accessions were analyzed for polymorphism at 92 simple sequence repeat(SSR) loci. The 995 identified alleles served as raw data for estimating genetic diversity and population structure. The number of alleles at a locus ranged from three to 27 with a mean of 10.4 alleles per locus. $F_{ST}$ values estimated by analysis of molecular variance(AMOVA) using SSR data set were 0.018, 0.027, and 0.016 for usage, collection site and maturity groups, respectively, indicating little genetic differentiation. The model-based clustering analysis placed the accessions into three clusters(K=3) with 0.0503 of $F_{ST}$, indicating moderate genetic differentiation. Duncan's Multiple Range Test at K = 3 on the basis of 18 quantitative traits revealed that one cluster was mainly differentiated from the other two clusters by seed related traits and the other two clusters were differentiated from each other by biochemical traits. Genetic structure of Korean soybean landraces was differentiated by model-based clustering and supported by their phenotypic traits in part. This preliminary study could be the first step towards more efficient germplasm management and utilization of soybean landraces and helpful in association studies between genotypic and phenotypic traits in Korean soybean landraces.

  • PDF

Genetic Diversity and Population Structure of a Korean Rice Germplasm Based on DNA Profiles

  • Lee, Kyung Jun;Lee, Jung-Ro;Shin, Myoung-Jae;Cho, Gyu-Taek;Ma, Kyung-Ho;Lee, Gi-An;Chung, Jong-Wook
    • KOREAN JOURNAL OF CROP SCIENCE
    • /
    • v.63 no.1
    • /
    • pp.1-7
    • /
    • 2018
  • Information on the patterns of genetic diversity and population structure is essential for the rational use and efficient management of germplasms; accurate information aids in monitoring germplasms, and can also be used to predict potential genetic gains. In this study, we assessed genetic diversity, focusing on Korean rice accessions for theand their sustainable conserved diversity. Using DNA profiling with 12 simple sequence repeat (SSR) markers, we detected a total of 333 alleles among 2,016 accessions. The number of alleles ranged from 21 to 53, with an average of 27.8. Average polymorphism information content was 0.797, with the lowest being 0.667 and the highest 0.940. CA cluster analysis and the model-based population structure revealed two main groups that could be subdivided into five subgroups. Analysis of the molecular variance study based on the SSR profile data showed 5% variance among the profiles, whereas we recorded 93% variance among individuals and 2% variance within individuals. Specifically, the utilized diversity for of the breeding program is restricted in that cultivars were located in limited clades. These results revealed that preserving the diversity of Korean landraces could be useful sources for breeding new rice cultivars, and cwould be the basis for the sustainable conservation and utilization of a Korean rice germplasm.

Fault-Causing Process and Equipment Analysis of PCB Manufacturing Lines Using Data Mining Techniques (데이터마이닝 기법을 이용한 PCB 제조라인의 불량 혐의 공정 및 설비 분석)

  • Sim, Hyun Sik;Kim, Chang Ouk
    • KIPS Transactions on Software and Data Engineering
    • /
    • v.4 no.2
    • /
    • pp.65-70
    • /
    • 2015
  • In the PCB(Printed Circuit Board) manufacturing industry, the yield is an important management factor because it affects the product cost and quality significantly. In real situation, it is very hard to ensure a high yield in a manufacturing shop because products called chips are made through hundreds of nano-scale manufacturing processes. Therefore, in order to improve the yield, it is necessary to analyze main fault process and equipment that cause low PCB yield. This paper proposes a systematic approach to discover fault-causing processes and equipment by using a logistic regression and a stepwise variable selection procedure. We tested our approach with lot trace records of real work-site. A lot trace record consists of the equipment sequence that the lot passed through and the number of faults for each fault type in the lot. We demonstrated that the test results reflected the real situation of a PCB manufacturing line.

Acupuncture for Subacute and Chronic Post-thoracotomy Pain in Patients with Traumatic Multiple Rib Fractures: A Study Protocol for a Randomised-controlled, Two-arm, Parallel Design, Pilot Trial

  • Kim, Kun Hyung;Cho, Hyun Min;Lee, Chan Kyu;Seok, JunePill;Kim, Seon Hee;Kim, Jung-Eun;Shin, Yu Kyung;Kim, Min Kyung
    • Journal of Acupuncture Research
    • /
    • v.35 no.2
    • /
    • pp.95-100
    • /
    • 2018
  • Background: The aim of this study is to assess the feasibility of acupuncture treatment for the management of subacute and chronic post-thoracotomy pain in patients with traumatic multiple rib fractures. Methods: A total of 30 participants who have undergone thoracotomy after traumatic multiple rib fractures will be recruited. Participants will be invited and equally randomised into acupuncture plus usual care and usual care alone groups. A computer-generated random number sequence will be used and concealed using opaque, sealed, sequentially numbered envelopes. Twelve sessions of manual and electrical acupuncture performed by Korean medicine doctors will be provided over a span of 3 months to participants allocated to the acupuncture group. Participants in the usual care group will continue pain medication, exercise and physical therapy as required. Study feasibility will be measured based on the proportion of patients who complete the measurement of pain at 12 or 24 weeks after baseline. The clinical outcomes will include; the average pain intensity over the recent week at rest, movement and cough, quality of life, patient's global assessment of recovery, respiratory function measured by the pulmonary function test and use of pain medication at 4, 8, 12 and 24 weeks after enrolment. Adverse events will be recorded for all participants. Written informed consent will be obtained from all participants. The local ethics committee has approved the study. This pilot trial will inform further studies investigating the potential role of acupuncture for subacute and chronic post-thoracotomy pain in patients with traumatic multiple rib fractures.

Study on the mechanism for the dynamic traversing of multiple firewalls using the concept of one-time master key (일회용 마스터 키 개념을 이용한 다중 방화벽 동적 통과 메커니즘 연구)

  • Park, Hyoung-Woo;Kim, Sang-Wan;Kim, Jong-Suk Ruth.;Jang, Haeng-Jin
    • The Journal of Korean Association of Computer Education
    • /
    • v.13 no.5
    • /
    • pp.103-110
    • /
    • 2010
  • If an exterior computer wants to join the Grid/cloud computing platform for a while, all of the related firewalls' filtering rule should be immediately updated. As the platform of Internet application is gradually evolving into the Grid/Cloud environment, the R&D requirement for the dynamic traversing of the multiple firewalls by a single try is also increasing. In this paper, we introduce the new mechanism for the dynamic traversing of the multiple firewalls using the concept of the one-time master key that can dynamically unlock the tiers of firewalls simultaneously instead of the existed filtering rule based method like a lock management at each firewall. The proposed master keys are like one-time password, consisted of IP addresses, port numbers, and TCP's initial sequence numbers, and generated by end users not administrators. They're exchanged mutually in advance and used to make a hole at local-side firewalls for the other's packet incoming. Therefore, the proposed mechanism can function regardless of the number or type of firewalls.

  • PDF

Current trends in forest science research using microsatellite markers in Korean national journals

  • Lee, Byeong-Ju;Eo, Soo Hyung
    • Korean Journal of Agricultural Science
    • /
    • v.43 no.2
    • /
    • pp.221-231
    • /
    • 2016
  • Microsatellites, which are sequences of repetitive short nucleotides, are abundant in the genome and have relatively many alleles at a locus. Hence, microsatellite markers are used in various research areas such as medicine, agriculture, and biology. Thanks to recent advanced techniques and databases associated with microsatellite marker development, foreign research relying on microsatellite markers is increasing in various study areas. In this study, by analyzing microsatellites-related articles published during 2000-2014 from eight Korean national journals representing zoology, botany, genetics, ecology and environmental science, breeding science, and forest science ('Animal Cells and Systems', 'Journal of Plant Biology', 'Genes and Genomics', 'Korean Society of Environment and Ecology', 'Korean Journal of Breeding Science', 'Journal of Agricultural Science, Chungnam National University', 'Journal of Korean Forest Society' and 'Forest Science and Technology'), we found that the number of articles and diversity of study subjects and objects have increased considerably. However, there are fewer applications of microsatellites in the national forest science area. During 2000-2014 in 'Journal of Korean Forest Society', the percentage of articles dealing with microsatellite markers was found to be the lowest with 4.2% among articles focusing on PCR-based markers including RAPD, AFLP, and ISSR. However, in 'Canadian Journal of Forest Research' and 'Forest Ecology and Management', microsatellite marker articles were represented at their highest with 69.2% and 76.2%, respectively. Given the advantages of microsatellite markers, the publication of research papers using microsatellites should be increased in Korean forest science journals to the level of studies published in prominent international journals.

MAC Address Spoofing Attack Detection and Prevention Mechanism with Access Point based IEEE 802.11 Wireless Network (Access Point 기반 무선 네트워크 환경에서의 MAC Address Spoofing 공격 탐지 및 차단 기법)

  • Jo, Je-Gyeong;Lee, Hyung-Woo
    • Journal of Internet Computing and Services
    • /
    • v.9 no.4
    • /
    • pp.85-96
    • /
    • 2008
  • An authentication procedure on wired and wireless network will be done based on the registration and management process storing both the user's IP address and client device's MAC address information. However, existent MAC address registration/administration mechanisms were weak in MAC Spoofing attack as the attacker can change his/her own MAC address to client's MAC address. Therefore, an advanced mechanism should be proposed to protect the MAC address spoofing attack. But, existing techniques sequentially compare a sequence number on packet with previous one to distinguish the alteration and modification of MAC address. However, they are not sufficient to actively detect and protect the wireless MAC spoofing attack. In this paper, both AirSensor and AP are used in wireless network for collecting the MAC address on wireless packets. And then proposed module is used for detecting and protecting MAC spoofing attack in real time based on MAC Address Lookup table. The proposed mechanism provides enhanced detection/protection performance and it also provides a real time correspondence mechanism on wireless MAC spoofing attack with minimum delay.

  • PDF

Development of SSR markers for genetic mapping of Korean ginseng and authentication of Korean ginseng cultivars

  • Kim, Nam-Hoon;Choi, Hong-Il;Jung, Ju-Yeon;Choi, Beom-Soon;Ahn, In-Ok;Lee, Joon-Soo;Yang, Tae-Jin
    • Proceedings of the Plant Resources Society of Korea Conference
    • /
    • 2010.10a
    • /
    • pp.11-11
    • /
    • 2010
  • The Korean ginseng, Panax ginseng C. A. Meyer is a popular medicinal herb in Araliaceae. Genetic map in crops provides valuable information for breeding, genetic and genomic researches. However, little information is available for construction of genetic map in ginseng. Up to now, we have produced large amounts of expressed sequence tags (ESTs) from four ginseng cultivars (37Mb, 49Mb, 39Mb, 47Mb from Gopoong, Gumpoong, Chunpoong and Yunpoong respectively using pyrosequencing technique and 5Mb from normalized full-length cDNA library of Chunpoong) to obtain comprehensive information of gene expression, and constructed EST database including ESTs from public database. Till now, we designed 261 SSR primer sets using EST sequences and identified 106 intergenic polymorphic markers. And 44 of the 106 showed polymorphisms among panax ginseng cultivars. Among 44 markers, 27 SSR polymorphic markers were inspected to 51 $F_2$ population from Yunpoong x Chunpoong, which showed good at the fitness of Mendellian segregation ratio 1:2:1. To enrich the number of markers, and thus construct high resolution genetic map which can be used as frame map for further genome sequencing. we are planning to develop large scale EST-derived SNP markers which are available in the F2 population. This study provides genetic information as well as foundation for ginseng researches such as genetics, genomics, breeding, and the final goal for whole genome sequencing. This study was supported by Technology Development Program for Agriculture and Forestry, Ministry for Food, Agriculture, Forestry and Fisheries, Republic of Korea (Grant No. 609001-051SB210).

  • PDF

A Case Study on Learning Behavior in Online English Reading Class of an On-off Course (온·오프 강의에서 온라인 영어읽기 수업의 학습행태 사례 연구)

  • Mi Yang Choi
    • Smart Media Journal
    • /
    • v.12 no.9
    • /
    • pp.142-151
    • /
    • 2023
  • This study is a case study on investigating students' learning behavior in the online English reading class of an on-off course. For this purpose, a survey was conducted on a total of 77 students from an English listening and reading course and phone interview with 5 students was implemented. The findings revealed that regularity of learning interval and learning sequence need to be improved through student management in order to increase the effect of online learning. In case of lecture watching, the students are good at utilizing the strengths of taped lecture, such as using pause and repeating watching. However, more research need to be done on how to develop online lecture to enhance students' understanding of the lecture. Regarding the offline review quiz that is supposed to stimulate students into their more positive watching of the lecture, it is suggested that a few of its related elements such as the online learning period and the number of quiz questions be corrected for its better effect.

Effect of Work Intensity on Fit Factor and Affecive Quality of Dustproof Mask (작업 강도가 방진 마스크의 밀착도와 감성품질에 미치는 영향)

  • Lee, Jinsil;Cho, Sunhee;Yun, Jungmin;Kim, Min-Sun;Park, Jaekyu;Choe, Jaeho
    • Journal of Korean Society for Quality Management
    • /
    • v.46 no.2
    • /
    • pp.301-310
    • /
    • 2018
  • Purpose: The purpose of this study is to investigate the effect of work intensity on fit factor and affective quality of the dustproof Background: Among the victims who suffer pneumoconiosis due to the inhalation of toxic substances or the lack of oxygen during the work, the proportion of the victims is larger than the other causes. Wearing a respirator may prevent pneumoconiosis, but it can be hazardous to workers because of the leakage through filters, cartridges, exhaust valves, broken parts, and face-to-face contact. Despite leakage through the contact area between the mask and the face has various causes such as the wearer's activity, sweat accumulation, facial shape, etc., There is a lack of relevant research and regulation compared to developed countries that have already institutionalized the law 30 years ago and give the right to sell through a test Method: The work intensity was adjusted by walking or running at 6km/h and 11km/h on the treadmill, and tasks were defined with reference to the test procedure and the exercise sequence applied in the face leakage test of the dustproof mask. And fit factor was measured objectively using 'Respirator Fit Tester 8038' which measures fit factor calculated by dividing the number of dust present outside the mask by inside the mask. In addition, affective quality was classified by the ease of use, ease of breathing, and ease of wearing, and was measured using the 5-point likert scale questionnaire. Results: There was a significant difference in fit factor, ease of breathing, and wearing convenience according to work intensity and no significant difference in ease of use(${\alpha}=0.01$). And when the work intensity was high, fit factor, ease of breathing, and wearing convenience were all lower than when the work intensity was low. Conclusion: In Korea, it is necessary to consider consideration of the work intensity when testing the leakage rate of the face part for safety certification of the respiratory protective equipment, When developing a mask, it should be possible to maintain high adhesion even under intense, active situation and high temperature conditions by selecting materials, improving the wearing style, and expanding the adjustable range.