• Title/Summary/Keyword: Research Diversity

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Genetic Diversity and Differentiation in Remnant Populations of Bupleurum latissimum Nakai, an Endangered Endemic Plant Species to Ulleung Island, Korea

  • Ku, Youn-Bong;Oh, Hyun-Kyung;Kong, Hak-Yang;Suh, Min-Hwan;Lee, Min-Hyo;Sviatlana, Trybush;Cho, Kang-Hyun
    • Animal cells and systems
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    • v.8 no.4
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    • pp.289-294
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    • 2004
  • Bupleurum latissimum is a narrowly endemic and endangered plant, restricted to only two small populations on steep cliffs of a small island, Ulleung Island, in Korea. The genetic diversity and population differentiation in the two remnant populations of the species were investigated using RAPD (random amplified polymorphic DNA) analysis. The Neis gene diversities were 0.146 in the smaller population of 45 individuals, and 0.151 in the larger population of 61 individuals. The genetic variation was not significantly different between these two populations. Genetic diversity within populations was not low considering the very small size of populations. Analysis of molecular variance (AMOVA) revealed higher variation within populations (65.9%) than genetic differentiation between them (34.1%). B. latissimum revealed higher population differentiation than other outbreeding species. The differentiation of the populations corresponded to low gene flow (Nem = 0.482). The cluster and principal coordination analyses provide strong support for high population differentiation, showing that all individuals of the two populations have built up population-specific clusters. Although gene flow between the two populations of B. latissimum was limited, they have preserved relatively high levels of genetic variation.

Improvement Transmission Reliability between Flight Type Air Node Using Concatenated Single Antenna Diversity (비행형 에어노드의 데이터 전송 신뢰성 향상을 위한 연접 단일 안테나 다이버시티 시스템)

  • Kang, Chul-Gyu;Kim, Dae-Hwan
    • Journal of Advanced Navigation Technology
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    • v.15 no.6
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    • pp.1053-1058
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    • 2011
  • In this paper, we propose a concatenated single antenna diversity system to assure the data transmission reliability between flight type air nodes which move according to their atypical orbit, then analyze its performance. The proposed system achieve a diversity gain using single antenna and a coding gain from convolutional code simultaneously. Simulation result about the bit error rate(BER) of the proposed system shows that its BER performance is about 9.5dB greater than convolutional code at $10^{-4}$ and about 14dB greater than space time block code at $10^{-3}$ which has a full diversity gain. In addition, compared with space time trellis code with diversity gain and coding gain, the proposed system shows the better 4dB at a BER of $10^{-5}$. Therefore, it is necessary that concatenated single antenna diversity should be adopted to the reliable data transmission of flight type air nodes.

Effects of vegetation structure and human impact on understory honey plant richness: implications for pollinator visitation

  • Cho, Yoori;Lee, Dowon;Bae, SoYeon
    • Journal of Ecology and Environment
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    • v.41 no.1
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    • pp.1-8
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    • 2017
  • Background: Though the biomass of floral vegetation in understory plant communities in a forested ecosystem only accounts for less than 1% of the total biomass of a forest, they contain most of the floral resources of a forest. The diversity of understory honey plants determines visitation rate of pollinators such as honey bee (Apis mellifera) as they provide rich food resources. Since the flower visitation and foraging activity of pollinators lead to the provision of pollination service, it also means the enhancement of plant-pollinator relationship. Therefore, an appropriate management scheme for understory vegetation is essential in order to conserve pollinator population that is decreasing due to habitat destruction and disease infection. This research examined the diversity of understory honey plant and studied how it is related to environmental variables such as (1) canopy density, (2) horizontal heterogeneity of canopy surface height, (3) slope gradient, and (4) distance from roads. Vegetation survey data of 39 plots of mixed forests in Chuncheon, Korea, were used, and possible management practices for understory vegetation were suggested. Results: This study found that 113 species among 141 species of honey plant of the forests were classified as understory vegetation. Also, the understory honey plant diversity is significantly positively correlated with distance from the nearest road and horizontal heterogeneity of canopy surface height and negatively correlated with canopy density. Conclusions: The diversity of understory honey plant vegetation is correlated to vegetation structure and human impact. In order to enhance the diversity of understory honey plant, management of density and height of canopy is necessary. This study suggests that improved diversity of canopy cover through thinning of overstory vegetation can increase the diversity of understory honey plant species.

Investigation of Bacterial Diversity in Membrane Bioreactor and Conventional Activated Sludge Processes from Petroleum Refineries Using Phylogenetic and Statistical Approaches

  • Silva, Cynthia;Jesus, Ederson C.;Torres, Ana P. R.;Sousa, Maira P.;Santiago, Vania M. J.;Oliveira, Valeria M.
    • Journal of Microbiology and Biotechnology
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    • v.20 no.3
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    • pp.447-459
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    • 2010
  • Bacterial diversity of two distinct wastewater treatment systems, conventional activated sludge (CAS) and membrane bioreactor (MBR), of petroleum refineries were investigated through 16S rRNA gene libraries. Sequencing and phylogenetic analysis showed that the bacterial community composition of sludge samples was distinct between the two wastewater treatment systems. MBR clones belonged predominantly to Class Betaproteobacteria, represented mainly by genera Thiobacillus and Thauera, whereas CAS clones were mostly related to Class Alphaproteobacteria, represented by uncultured bacteria related to Order Parvularculales. Richness estimators ACE and Chao revealed that the diversity observed in both libraries at the species level is an underestimate of the total bacterial diversity present in the environment and further sampling would yield an increased observed diversity. Shannon and Simpson diversity indices were different between the libraries and revealed greater bacterial diversity for the MBR library, considering an evolutionary distance of 0.03. LIBSHUFF analyses revealed that MBR and CAS communities were significantly different at the 95% confidence level ($P{\leq}0.05$) for distances $0{\leq}D{\leq}0.20$. This work described, qualitatively and quantitatively, the structure of bacterial communities in industrial-scale MBR and CAS processes of the wastewater treatment system from petroleum refineries and demonstrated clearly differentiated communities responsible for the stable performance of wastewater treatment plants.

Genetic diversity and population structure of Chinese ginseng accessions using SSR markers

  • An, Hyejin;Park, Jong-Hyun;Hong, Chi Eun;Raveendar, Sebastin;Lee, Yi;Jo, Ick-Hyun;Chung, Jong-Wook
    • Journal of Plant Biotechnology
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    • v.44 no.3
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    • pp.312-319
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    • 2017
  • The need to preserve and use plant genetic resources is widely recognized, and the prospect of dwindling plant genetic diversity, coupled with increased demands on these resources, has made them a topic of global discussion. In the present study, the genetic diversity and population structure of 73 ginseng accessions collected from six regions in China were analyzed using eight simple sequence repeat (SSR) markers. Major allele frequencies ranged between 0.38 ~ 0.78, with a mean allele frequency value of 0.571. The number of alleles discovered ranged from 3 to 10 per accession, with a mean number of 7; 56 alleles were discovered in total. Gene diversity (GD) and polymorphic information content (PIC) values were similar to each other, and they ranged from 0.36 ~ 0.77 (mean 0.588) and 0.33 ~ 0.74 (mean 0.548), respectively. Accessions were divided into three clusters based on their phylogenetic relationships and genetic similarities, and although the populations were similar, they were not classified according to the region. Regional genetic diversity was also similar, with slight differences observed based on the number of accessions per region. It is expected that the findings of the present study can provide basic data for future studies on ginseng genetic diversity and for breeding ginseng cultivars.

Mitochondrial COI sequence-based population genetic analysis of the grasshopper, Patanga japonica Bolívar, 1898 (Acrididae: Orthoptera), which is a climate-sensitive indicator species in South Korea

  • Jee-Young Pyo;Jeong Sun Park;Seung Hyun Lee;Sung-Soo Kim;Heon Cheon Jeong;Iksoo Kim
    • International Journal of Industrial Entomology and Biomaterials
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    • v.47 no.2
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    • pp.99-114
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    • 2023
  • Patanga japonica Bolívar, 1898 (Orthoptera: Acrididae) is listed as a climate-sensitive indicator species in South Korea and is called southern group of insects in that the main distributional range is southern region of South Korea and Asian continent. In South Korea, thus, the species was distributed mainly in southern region of South Korea including southward a remote Jeju Island, but recently the species has often been detected in mid to northern region of South Korea, implying northward range expansion in response to climate change. Understanding the characteristics of the changes in genetic diversity during range expansion in response to climate change could be a foundation for the understanding of future biodiversity. Thus, in this study, we attempted to understand the changing pattern of the genetic diversity of the P. japonica in newly expanded regions. For the purpose of study, we collected 125 individuals from seven localities throughout South Korea including two newly distributed regions (Pyeongtaek and Yeongwol at ~37° N). These were sequenced for a segment of mitochondrial cytochrome oxidase subunit I (COI) and analyzed for genetic diversity, haplotype frequency, and population genetic structure among populations. Interestingly, northward range expansion accompanied only haplotypes, which are most abundant in the core populations, providing a significant reduction in haplotype diversity, compared to other populations. Moreover, genetic diversity was still lower in the expanded regions, but no genetic isolation was detected. These results suggest that further longer time would take to reach to the comparable genetic diversity of preexisting populations in the expanded regions. Probably, availability of qualified habitats at the newly expanded region could be pivotal for successful northward range expansion in response to climate change.

Assessment of Stand Diversity Change by Different Silvicultural Treatments for Natural Deciduous Forests in Mt. Gariwang (가리왕산 일대 천연 활엽수림의 산림작업별 시업전후의 임분다양성 변화 평가)

  • Sung, Joo Han;Lee, Young Geun;Park, Ko Eun;Shin, Man Yong
    • Journal of Korean Society of Forest Science
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    • v.103 no.4
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    • pp.613-621
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    • 2014
  • This study was conducted to estimate the changes of stand diversity before and after applying three different silvicultural treatments such as selection cutting system, two-storied system, and shelterwood system. Data were collected in the natural deciduous forests in Pyungchang of Gangwon Province, Korea. Nine permanent sampling plots of 0.09 ha were established in the forests and the each of silvicultural treatments was applied to three sampling plots, respectively. Some tree variables were measured in each stand before and after the silvicultural treatments were applied. With these data, stand attributes were estimated in each stand before and after the silvicultural treatments. In this study, two different indices related to each of stand diversity indices such as contagion, DBH-difference, height-difference, and mingling were estimated and compared to analyze the differences of stand diversity among the stands before and after silvicultural treatments. As a result, total eight stand diversity indices were used to analyze the differences among structures of stands managed by three different silvicultural treatments. Duncan's multiple range test and t-test were then employed to statistically analyze the difference of stand diversity among the stands. The results revealed that stand structures seem to be improved after applying the silvicultural treatments. There are significant differences in the stand diversity indices between before and after silvicultural treatments for each stand. According to the evaluation of stand diversity indices, it was confirmed that spatial structure of the stands was improved by applying the silvicultural treatments.

GA-SVM Ensemble 모델에서의 accuracy와 diversity를 고려한 feature subset population 선택

  • Seong, Gi-Seok;Jo, Seong-Jun
    • Proceedings of the Korean Operations and Management Science Society Conference
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    • 2005.05a
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    • pp.614-620
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    • 2005
  • Ensemble에서 feature selection은 각 classifier의 학습할 데이터의 변수를 다르게 하여 diversity를 높이며, 이것은 일반적인 성능향상을 가져온다. Feature selection을 할 때 쓰는 방법 중의 하나가 Genetic Algorithm (GA)이며, GA-SVM은 GA를 기본으로 한 wrapper based feature selection mechanism으로 response model과 keystroke dynamics identity verification model을 만들 때 좋은 성능을 보였다. 하지만 population 안의 후보들간의 diversity를 보장해주지 못한다는 단점 때문에 classifier들의 accuracy와 diversity의 균형을 맞추기 위한 heuristic parameter setting이 존재하며 이를 조정해야만 하였다. 우리는 GA-SVM 알고리즘을 바탕으로, population안 후보들의 fitness를 측정할 때 accuracy와 diversity 둘 다 고려하는 fitness function을 도입하여 추가적인 classifier 선택 작업을 제거하면서 성능을 유지시키는 방안을 연구하였으며 결과적으로 알고리즘의 복잡성을 줄이면서도 모델의 성능을 유지시켰다.

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Linear Diversity Analysis for M-ary Square Quadrature Amplitude Modulation over Nakagami Fading Channels

  • Yoon, Dong-Weon;Chang, Dae-Ig;Kim, Nae-Soo;Woo, Hoon-Shik
    • ETRI Journal
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    • v.25 no.4
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    • pp.231-237
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    • 2003
  • We derive and analyze the exact closed-form expression for the average bit error probability (BEP) of M-ary square quadrature amplitude modulation (QAM) for diversity reception in frequency-nonselective Nakagami fading. A maximal ratio combining (MRC) diversity technique with independent or correlated fading cases are considered. Numerical results demonstrate error performance improvement with the use of MRC diversity reception. The presented new expressions offer a convenient way to evaluate the performance of M-ary square QAM with an MRC diversity combiner for various cases of practical interest.

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The Performance Improvement of a Multicarrier DS-CDMA System Using both Time-Diversity and Frequency Offset

  • Kim, Ki-Doo;Oh, Jung-Hun;Milstein, Laurence B.
    • ETRI Journal
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    • v.21 no.4
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    • pp.29-40
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    • 1999
  • In this paper, we show the robustness of a proposed system using both a frequency diversity and a time diversity effect when the channel assumptions are relaxed such that all sub-bands are not independent fading. We take time-repetition coding with interleaving such that the repetition code symbols are spaced sufficiently far apart to guarantee time diversity. We also incorporate offset multicarriers into a proposed multicarrier DS-CDMA system in a different way compared to that of [10] to reduce the total multiple access interference. When we take a convolutional encoder instead of a time-repetition encoder, and again use both time diversity and frequency offset, then we can obtain the significant performance gain.

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