• Title/Summary/Keyword: Range Alignment

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Wisteria Vein Mosaic Virus Detected for the First Time in Iran from an Unknown Host by Analysis of Aphid Vectors

  • Valouzi, Hajar;Hashemi, Seyedeh-Shahrzad;Wylie, Stephen J.;Ahadiyat, Ali;Golnaraghi, Alireza
    • The Plant Pathology Journal
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    • v.36 no.1
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    • pp.87-97
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    • 2020
  • The development of reverse transcription-polymerase chain reaction using degenerate primers against conserved regions of most potyviral genomes enabled sampling of the potyvirome. However, these assays usually involve sampling potential host plants, but identifying infected plants when they are asymptomatic is challenging, and many plants, especially wild ones, contain inhibitors to DNA amplification. We used an alternative approach which utilized aphid vectors and indicator plants to identify potyviruses capable of infecting common bean (Phaseolus vulgaris). Aphids were collected from a range of asymptomatic leguminous weeds and trees in Iran, and transferred to bean seedlings under controlled conditions. Bean plants were tested serologically for potyvirus infections four-weeks postinoculation. The serological assay and symptomatology together indicated the presence of one potyvirus, and symptomology alone implied the presence of an unidentified virus. The partial genome of the potyvirus, encompassing the complete coat protein gene, was amplified using generic potyvirus primers. Sequence analysis of the amplicon confirmed the presence of an isolate of Wisteria vein mosaic virus (WVMV), a virus species not previously identified from Western Asia. Phylogenetic analyses of available WVMV sequences categorized them into five groups: East Asian-1 to 3, North American and World. The Iranian isolate clustered with those in the World group. Multiple sequence alignment indicated the presence of some genogroup-specific amino acid substitutions among the isolates studied. Chinese isolates were sister groups of other isolates and showed higher nucleotide distances as compared with the others, suggesting a possible Eastern-Asian origin of WVMV, the main region where Wisteria might have originated.

The Result of Open Reduction and Fixation in Sternal Fracture with Displacement (흉골 전위골절에 대한 수술적 정복고정술의 결과)

  • Kim, Young-Jin;Cho, Hyun-Min
    • Journal of Trauma and Injury
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    • v.23 no.2
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    • pp.175-179
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    • 2010
  • Purpose: Sternal fractures after blunt thoracic trauma can cause significant pain and disability. They are relatively uncommon as a result of direct trauma to the sternum and open reduction is reserved for those with debilitating pain and fracture displacement. We reviewed consecutive 11 cases of open reduction and fixation of sternum and tried to find standard approach to the traumatic sternal fractures with severe displacement. Methods: From December 2008 to August 2010, the medical records of 11 patients who underwent surgical reduction and fixation of sternum for sternal fractures with severe displacement were reviewed. We investigated patients' characteristics, chest trauma, associated other injuries, type of open reduction and fixation, combined operations, preoerative ventilator support and postoperative complications. Results: The mean patient age was 59.3years (range, 41~79). The group comprised 6 male and 5 female subjects. Among 11 patients who underwent open reduction and fixation for sternal fracture with severe displacement, 6 cases had isolated sternal fractures and the other 5 patients had associated other injuries. Sternal fractures were caused by car accidents (9/11, 81.8%), falling down (1/11, 9.1%) and direct blunt trauma to the sternum (1/11, 9.1%), respectively. 3 of the 7 patients (42.9%) who underwent sternal plating with longitudinal plates showed loosening of fixation. Otherwise, none of the 4 patients who underwent surgical fixation using T-shaped plate had stable alignment of the fracture. Conclusion: Sternal fractures with severe displacement need to be repaired to prevent chronic pain, instability of the anterior chest wall, deformity of the sternum, and even kyphosis. In the present study, a T-shaped plate with a compression-tension mechanism constitutes the treatment of choice for displaced sternal fractures.

Hybrid-integrated Tunable Laser Using Polymer-ring Resonator-based Add/Drop Filter Reflector and Reflective Semiconductor Optical Amplifier (폴리머 링 공진기 기반의 가감필터 반사기와 반사형 반도체 광 증폭기가 하이브리드 집적된 파장 가변 레이저)

  • Lee, Ho;Kim, Gun-Woo;Chung, Young-Chul;Kim, Su-Hyun
    • Korean Journal of Optics and Photonics
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    • v.20 no.4
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    • pp.217-222
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    • 2009
  • In this paper, a low-cost hybrid-integrated tunable laser is realized using a polymer-ring resonator-based add/drop filter reflector and a reflective semiconductor optical amplifier. The add/drop filter reflector, composed of a double-ring resonator with different radii, can have characteristics of selective wavelength reflection and wide wavelength tuning with an aid of vernier effect derived from the radii difference. By hybrid-integrating the reflective semiconductor optical amplifier with the add/drop filter reflector, a tunable laser can be realized through an active alignment method. The hybrid laser exhibited a single mode lasing with side mode suppression ratio of 26 dB and full width half maximum of 0.03 nm. In addition, applying a low current as small as 25 mA onto electrodes over add/drop filter reflector, a wavelength tuning range of 17 nm could be obtained.

Construction of Ultrasonic Power Measurement System and Its Performance Evaluation (초음파 파워 측정 시스템 구성 및 성능평가)

  • Jho Moon Jae;Kim Yong Tae;Yun Yong Hyeon;Jung Suug Soo
    • The Journal of the Acoustical Society of Korea
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    • v.24 no.8
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    • pp.431-440
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    • 2005
  • The precise measurement of ultrasonic power is important to the qualify assurance and the safety of medical ultrasonic equipments In the Present work, a brier theory was introduced to determine the ultrasonic Power from the time valving balance-indication due to the radiation force acting on an absorbing target and/or other causes such as buoyancy during the repetition of on/off behavior of ultrasonic irradiation. The developed automated system measuring the ultrasonic power was described in detail with the precise mechanical alignment tool , the electric signal generation network, the control and measurement network and the appropriate procedure. The ultrasonic power measured by the developed system was compared to the reference data calibrated by the other national metrology institute at 1 MHz, 5 MHz, 10 MHz, and 15 MHz over the range 10 mW to 10 W. Their relative differences are within $5\%$.

Kinematic Analysis of Lower Extremity and Evaluation of Skill of Skier Using Parameters of Inertial Sensors During Ski Simulator Exercise (스키 시뮬레이터 운동 시 하지 운동특성 분석 및 관성센서 파라미터를 이용한 스키 숙련도 평가)

  • Kim, Jungyoon;Ahn, Soonjae;Park, Sunwoo;Shin, Isu;Kim, Gyoosuk;Kim, Youngho
    • Journal of Biomedical Engineering Research
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    • v.35 no.3
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    • pp.35-41
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    • 2014
  • In this study, joint angles of the lower extremity and inertial sensor data such as accelerations and angular velocities were measured during a ski simulator exercise in order to evaluate the skill of skiers. Twenty experts and twenty unskilled skiers were recruited for the study. All expert skiers held the certificates issued by the Korea Ski Instructors Association. A three-dimensional motion capture system and two inertial sensors were used to acquire joint movements, heel acceleration and heel angular velocity during ski simulator exercises. Pattern variation values were calculated to assess the variations in ski simulator motion of expert and unskilled skiers. Integral ratio of roll angular velocity was calculated to determine the parallel alignment of the two feet. Results showed that ski experts showed greater range of motion of joint angle, peak-to-peak amplitude(PPA) of heel acceleration and PPA of heel angular velocity than unskilled skiers. Ski experts showed smaller pattern variations than unskilled skiers. In addition, the integral ratio of roll angular velocity in ski experts was closer to 1. Inertial sensor data measurements during the ski simulator exercises could be useful to evaluate the skill of the skier.

Coma Aberration Correction of Optical System by using a Robot Arm Type Coordinated Measuring Machine (로봇팔 타입 삼차원좌표측정기를 이용한 광학계의 비축수차 보정)

  • Chun, Ho Bin;Kim, Goeun;Song, In-Woong;Kang, Hyug-Mo;Rhee, Hyug-Gyo;Ghim, Young-Sik;Yang, Ho-Soon;Kwon, Jong Hoon
    • Journal of the Semiconductor & Display Technology
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    • v.15 no.3
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    • pp.62-66
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    • 2016
  • Optical system needs to be aligned before its undergoing process, is usually shows coma aberrations, which occurred due to imperfection in the lens or other components results in off-axis point sources, appearing to have a tail like a comet. There are some methods to correct coma aberration. In this paper, to correct coma aberration in optical system, using a robot arm type coordinate measuring machine(CMM). CMMs are widely used to measure the form of accuracy of parts and positioning accuracy of systems. Among them, robot arm type CMM has more advantages than the others, such as its mobility and measuring range. However, robot arm type CMM has lower accuracy than cantilever type CMM. To prove robot arm type CMM's accuracy, several factors were suggested in this paper and the final measuring results were compared to a commercial cantilever type CMM. Based on this accuracy, a typical optical system was successfully aligned by using our robot arm type CMM.

Effect of strengthening and elongation exercises of upper extremity muscle to forward head posture correction

  • Lee, Jun Cheol
    • International journal of advanced smart convergence
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    • v.7 no.1
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    • pp.33-41
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    • 2018
  • This study was designed to provide basic data for developing exercise program that helps correcting posture by knowing the effect of strengthening and elongation exercises of upper extremity muscle to forward head posture correction. In this study determined subjects whether they had forward head posture or not. On the basis of the New York state posture rating, if a subject's posture is match up with the normal standard posture, gives 5 points and if the posture is slightly get out of the normal standard posture, gives 3 points and if the posture is apparently get out of the standard, gives 1 points. When determining the forward head posture, if talus, humerus and outer ear center are on the same line, it is determined as normal and if outer ear center is off the line less than 1.0cm, it is a slight deformation and if outer ear center is off the line more than 1.0cm, it is a high deformation. In the study selected people who have more than 1 cm gap between two vertical lines start from outer ear center and acromion separately as subjects. Length between the ideal alignment line measured by using goniometer and temporal region showed statistically significant decrease as $2.36{\pm}1.07cm$ before the intervention and $1.06{\pm}0.88cm$ after the intervention. After 4 weeks of neck and chest extensor muscle exercise, the group who exercised both showed increase in range of neck joint motion and neck flexion of the forward head posture. Meanwhile the group who only exercised neck extensor muscle only and the group who only exercised chest extensor muscle didn't showed statistically significant result. That only the group who exercised both muscles showed significant result is the different with studies before. Because this study didn't target patient who had a lesion, couldn't compare effect of the conservative manner and exercise. However, this study provides the fact that the group who exercised both neck and chest muscle had more effect than the control group.

A Study on Temporal Measurement of Size and Concentration for Soot Aggregates among Exhaust Emissions in Diesel Engines (디젤기관 배기 배출물에 있어서 매연 응집체 크기 및 농도의 시간적 계측에 관한 연구)

  • Bae, Myung-Whan;Kamimoto, Takeyuki;Bae, Chang-Hwan
    • Transactions of the Korean Society of Automotive Engineers
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    • v.15 no.1
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    • pp.116-124
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    • 2007
  • An optical method to measure the size and number density of soot aggregates in diesel exhaust has been proposed in this study. Two laser beams in co-axial alignment transmit a soot loaded exhaust gas flow, and the transmittance at each wavelength is detected by a photo diode simultaneously. The volume equivalent diameter and number density of soot aggregates in the optical path can be theoretically given by the transmittance values measured at two wavelengths. A test conducted by a single cylinder, 4 cycle, small and DI diesel engine shows that the temporal variations of the size and number density of soot aggregates in the diesel exhaust can be measured by the proposed method at a transient mode operation. It is found that the volume equivalent diameter varied temporally from 70 to 110 nm during the period that high soot concentration is observed. One can also conclude that the optical length longer than 1 m in the dynamic range regarding this method is preferable for measuring soot concentration at the level of $1\;mg/m^3$.

Clinical presentation and specific stabilizing exercise management in Lumbar segmental instability (요추분절의 불안정성에 대한 임상적 소개와 안정성 운동관리)

  • Jung Yeon-Woo;Bae Sung-Soo
    • The Journal of Korean Physical Therapy
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    • v.15 no.1
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    • pp.155-170
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    • 2003
  • Lumbar segmental instability is considered to represent a significant sub-group within the chronic low back pain population. This condition has a unique clinical presentation that displays its symptoms and movement dysfunction within the neutral zone of the motion segment. The loosening of the motion segment secondary to injury and associated dysfunction of the local muscle system renders it biomechanically vulnerable in the neutral zone. There in evidence of muscle dysfunction related to the control of the movement system. There is a clear link between reduced proprioceptive input, altered slow motor unit recruitment and the development of chronic pain states. Dysfunction in the global and local muscle systems in presented to support the development of a system of classification of muscle function and development of dysfunction related to musculoskeletal pain. The global muscles control range of movement and alignment, and evidence of dysfunction is presented in terms of imbalance in recruitment and length between the global stability muscles and the global mobility muscles. The local stability muscles demonstrate evidence of failure of aeequate segmental control in terms of allowing excessive uncontrolled translation or specific loss of cross-sectional area at the site of pathology Motor recruitment deficits present as altered timing and patterns of recruitment. The evidence of local and global dysfunction allows the development of an integrated model of movement dysfunction. The clinical diagnosis of this chronic low back pain condition is based on the report of pain and the observation of movement dysfunction within the neutral zone and the associated finding of excessive intervertebral motion at the symptomatic level. Four different clinical patterns are described based on the directional nature of the injury and the manifestation of the patient's symptoms and motor dysfunction. A specific stabilizing exercise intervention based on a motor learning model in proposed and evidence for the efficacy of the approach provided.

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Analysis of Sternal Fixation Results According to Plate Type in Sternal Fracture

  • Byun, Chun Sung;Park, Il Hwan;Hwang, Wan Jin;Lee, Yeiwon;Cho, Hyun Min
    • Journal of Chest Surgery
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    • v.49 no.5
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    • pp.361-365
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    • 2016
  • Background: Sternal fractures are relatively rare, and caused mainly by blunt anterior chest wall trauma. In most cases, sternal fractures are treated conservatively. However, if the patient exhibits problematic symptoms such as intractable chest wall pain or bony crepitus due to sternal instability, surgical correction is indicated. But no consensus exists regarding the most appropriate surgical method. We analyzed the results of surgical fixation in cases of sternal fracture in order to identify which surgical method led to the best outcomes. Methods: We retrospectively reviewed the medical records of patients with sternal fractures from December 2008 to December 2011, and found 19 patients who underwent open reduction and internal fixation of the sternum with a longitudinal plate (L-group) or a T-shaped plate (T-group). We investigated patients' characteristics, clinical details regarding each case of chest trauma, the presence of other associated injuries, the type of open reduction and fixation, whether a combined operation was performed, and postoperative complications. Results: Of the 19 patients, 10 patients (52.6%) were male, and their average age was 56.8 years (range, 32 to 82 years). Seven patients (36.8%) had isolated sternal fractures, while 12 (63.2%) had other associated injuries. Seven patients (36.8%) were in the L-group and 12 patients (63.2%) were in the T-group. Three patients in the L-group (42.9%) showed a loosening of the fixation. In all patients in the T-group, the fracture exhibited stable alignment. Conclusion: Open reduction and internal fixation with a T-shaped plate in sternal fractures is a safer and more efficient treatment method than treatment with a longitudinal plate, especially in patients with a severely displaced sternum or anterior flail chest, than a longitudinal plate.