• 제목/요약/키워드: RPS-T

검색결과 29건 처리시간 0.023초

Genetic Relationship Between Korean and Mongolian Populations Based on the Y Chromosome DNA Variation

  • Jin, Han-Jun;Kim, Wook
    • Animal cells and systems
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    • 제7권2호
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    • pp.139-144
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    • 2003
  • We analyzed seven Y chromosome binary markers (YAP, RPS4Y_711,\;M9,\;M175,\;LINE1,\;SRY_+465$ and 47z) in samples from a total of 254 males from Koreans and tow Mongolian ethnic groups (Buryat and Khalkh) to study the genetic relationship among these populations. We found eight distinct Y haplogroups constructed from the seven binary markers. Haplogroup DE-YAP was present at extremely low frequencies (∼2%) in the Korean and Mongolian populations. This result is consistent with earlier reports that showed the YAP+ chromosomes to be highly polymorphic only in populations from Japan and Tibet in east Asia. The observed high frequency of haplogroup $C-RPS4Y_711$ in the Mongolian populations (∼40%) is concordant with recent findings, showing that the $RPS4Y_711$-T chromosomes were distributed at high frequencies in Siberian and Mongolian populations compared with most other populations from east Asia. Thus, the relatively moderate frequency of haplogroup $C-RPS4Y_711$ in Korean (∼15%) can be seen as genetic evidence for probable interaction with Mongolian and/or Siberian populations. In contrast, the majority (∼75%) of modern Koreans studied here had high frequencies of Y chromosome lineages of haplogroup O-M175 and additional haplogroupts that define sublineage of O-M175, which are most likely related with modern populations in China. In conclusion, our data on the Y chromosome haplogroup distribution may provide evidence for interaction between Korean and Mongolian populations, but Korean tend to be much more related with those from southern-to-northern populations of China than to Mongolians in east Asia.

현장 미생물을 이용한 생물학적 복합토양정화공정에 관한 연구 (A Biological Complex Soil Treatment Process Using Selected Soil Bacterial Strains)

  • 차민환;이한욱;박재우
    • 한국지반환경공학회 논문집
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    • 제11권5호
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    • pp.5-13
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    • 2010
  • 본 연구는 생물학적 지상처리 토양정화공정을 기본으로 생물반응기, 롤형 접촉산화장치(rolled pipe type of contact oxidation system, RPS), 화학처리장치의 처리과정을 통해 유류, 중금속, 영양염류로 오염된 토양 및 지하수를 동시에 정화 복원할 수 있는 생물학적 복합토양정화공정을 개발 검증하고자 실시하였다. 실험을 통해 현장 토양 중에 있는 토양정화효율이 우수한 5종의 미생물을 분리 선발하였고, 토양으로부터 유류를 효과적으로 분리하기 위한 계면활성제로는 Anion과 Nonion계 복합제가 가장 우수한 것으로 확인되었는데, 오염된 토양에 계면활성제를 처리한 후 선발된 미생물을 혼합해 적용하는 것이 가장 효율적인 것으로 나타났다. 토양정화조를 이용해 석유계총탄화수소(Total Petroleum hydrocarbon, TPH)로 오염된 토양을 처리한 결과, 5,000mg/L 내외의 저농도 오염시 28일간 90.0%, 10,000mg/L 이상의 고농도 오염시 81일간 90.7%의 처리효율을 나타냈으며, 토양정화조에서 배출된 침출수를 생물반응기로 1차 처리하고 롤형 접촉산화장치로 2차 처리한 결과, BOD 90.6%, $COD_{Mn}$ 73.0%, SS 91.9%, T-N 73.8%, T-P 65.7%의 평균 처리효율을 얻을 수 있었다. 이후 응집제를 통한 화학처리장치를 적용하여 중금속을 99.0% 이상 제거하였다.

The complete chloroplast genome of Scrophularia kakudensis and a comparative analysis of S. kakudensis and S. cephalantha

  • Ogyeong SON;KyoungSu CHOI
    • 식물분류학회지
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    • 제53권3호
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    • pp.237-241
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    • 2023
  • The genus Scrophularia L. (Scrophulariaceae) comprises 200-270 species worldwide and is a taxonomically challenging lineage, displaying morphological diversity and hybridization. S. kakudensis is morphologically similar to the closely related taxa S. kakudensis var. microphylla, S. pilosa, and S. cephalantha. Therefore, the purpose of this study was to sequence the chloroplast (cp) genome of S. kakudensis using next-generation sequencing and compare it to those of related taxa. The complete cp genome sequence of Scrophularia kakudensis was found to be 152,355 bp long, consisting of a pair of inverted repeats of 25,485 bp that separate a large single-copy (LSC) of 83,479 bp from small single-copy regions of 17,909 bp. The cp genome contained 78 protein-coding genes, 30 tRNAs, and four rRNAs. A phylogenetic analysis based on 78 protein-coding genes from six Scrophularia species showed S. kakudensis and S. cephalantha formed with 100% bootstrap values. We compared the complete cp genomes of S. kakudensis and S. cephalantha and identified seven sequence divergence regions: matK/rps16, rps16/trnQ, trnS/trnG, rpoB/trnC, trnS/trnG, rpl32/trnL, and ndhD/psaC. These regions may be useful for determining the phylogenetic relationships among S. kakudensis-related species.

실시간 위험환경 관리를 위한 센서 모듈시스템 연구 (A Study on the Sensor Module System for Real-Time Risk Environment Management)

  • 조영창;권기진;정종혁;김민수
    • 전기전자학회논문지
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    • 제22권4호
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    • pp.953-958
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    • 2018
  • 본 연구에서는 산업현장, 지하시설물의 밀폐공간에서 유해가스 및 생체신호를 동시에 검출이 가능한 휴대형 검출시스템을 개발하였다. 개발된 시스템은 가스검출용 센서모듈, 패치형 1채널 소형 ECG 센서, 3축가속도 검출센서용 모듈 및 통계분석용 시스템이다. 시스템모듈의 성능을 검증하기 위해 디지털해상도, 생체신호증폭도, 출력전압 및 초소형모듈의 크기로 평가하였다. 개발된 시스템의 성능결과 디지털해상도는 300(rps), 신호증폭이득은 500dB이상 성능을 가졌고, 심전도 모듈은 $50mm{\times}10mm{\times}10mm$로 제작되어 패치형으로 활용도를 높일 수 있다. 본 연구의 휴대용 가스검출기 및 패치용 심전도, 가속도검출기는 산업현장작업자의 실시간 감시용 IoT 기반 관리시스템으로 활용한다면 가치가 높을 것으로 생각된다.

Plastid genome of Aster altaicus var. uchiyamae Kitam., an endanger species of Korean asterids

  • Park, Jihye;Shim, Jaekyung;Won, Hyosig;Lee, Jungho
    • Journal of Species Research
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    • 제6권1호
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    • pp.76-90
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    • 2017
  • Aster altaicus var. uchiyamae Kitam. is an endemic taxon of Korea and is protected by law as an endanger taxon. The genetic information of A. altaicus var. uchiyamae is unavailable in Genbank. Here we sequenced chloroplast genome of A. altaicus var. uchiyamae. The cp-genome of Aster altaicus var. uchiyamae was 152,446 bps in size: LSC was 84,240 bps, IR 25,005 bps, SSC 18,196 bps. The cp-genome contains 112 genes and 21 introns consisted of 79 protein coding genes(PCGs), 4 RNA genes, and 29 tRNA genes, with 20 group II introns and one group I intron. There were three pseudo-genes including ${\psi}$-ycf1, ${\psi}$-rps19, and ${\psi}$-trnT_GGU. Eighteen genes, five introns, and parts of two genes and an intron are found within the IR, which has two copies. The cp-DNA of Aster altaicus var. uchiyamae is distinguished from A. spathulifolius, only known cp-genome of the genus Aster, by 172 SNP in genic regions of 43 PCGs and 21 indels in 11 PCGs and SSU. The chloroplast genome sequence was deposited at GenBank (KX35265).

A report of the second chloroplast genome sequence in Veronica nakaiana (Plantaginaceae), an endemic species in Korea

  • LEE, Yae-Eun;LEE, Yoonkyung;KIM, Sangtae
    • 식물분류학회지
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    • 제51권1호
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    • pp.109-114
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    • 2021
  • Veronica nakaiana Ohwi (Plantaginaceae) is an endemic taxon on Ulleungdo Island, Korea. We report the second complete chloroplast genome sequence of V. nakaiana. Its genome size is 152,319 bp in length, comprising a large single-copy of 83,195 bp, a small single-copy of 17,702 bp, and a pair of inverted repeat regions of 25,711 bp. The complete genome contains 115 genes, including 51 protein-coding genes, four rRNA genes, and 31 tRNA genes. When comparing the two chloroplast genomes of V. nakaiana, 11 variable sites are recognized: seven SNPs and four indels. Two substitutions in the coding regions are recognized: rpoC2 (synonymous substitution) and rpl22 (nonsynonymous substitution). In nine noncoding regions, one is in the tRNA gene (trnK-UUU), one is in the intron of atpF, and seven are in the intergenic spacers (trnH-GUG~psbA, trnK-UUU, rps16~trnQ-UUG, trnC-GCA~petN, psbZ~trnG-GCC, ycf3~trnS-GGA, ycf4~cemA, and psbB~psbT). The data provide the level of genetic variation in V. nakaiana. This result will be a useful resource to formulate conservation strategies for V. nakaiana, which is a rare endemic species in Korea.

Enhanced supply of methionine regulates protein synthesis in bovine mammary epithelial cells under hyperthermia condition

  • Zhou, Jia;Yue, Shuangming;Xue, Benchu;Wang, Zhisheng;Wang, Lizhi;Peng, Quanhui;Xue, Bai
    • Journal of Animal Science and Technology
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    • 제63권5호
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    • pp.1126-1141
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    • 2021
  • Recent evidence has shown that methionine (Met) supplementation can improve milk protein synthesis under hyperthermia (which reduces milk production). To explore the mechanism by which milk protein synthesis is affected by Met supplementation under hyperthermia, mammary alveolar (MAC-T) cells were incubated at a hyperthermic temperature of 42℃ for 6 h in media with different concentrations of Met. While the control group (CON) contained a normal amino acid concentration profile (60 ㎍/mL of Met), the three treatment groups were supplemented with Met at concentrations of 10 ㎍/mL (MET70, 70 ㎍/mL of Met), 20 ㎍/mL (MET80, 80 ㎍/mL of Met), and 30 ㎍/mL (MET90,90 ㎍/mL of Met). Our results show that additional Met supplementation increases the mRNA and protein levels of BCL2 (B-cell lymphoma-2, an anti-apoptosis agent), and decreases the mRNA and protein levels of BAX (Bcl-2-associated X protein, a pro-apoptosis agent), especially at an additional supplementary concentration of 20 ㎍/mL (group Met80). Supplementation with higher concentrations of Met decreased the mRNA levels of Caspase-3 and Caspase-9, and increased protein levels of heat shock protein (HSP70). The total protein levels of the mechanistic target of rapamycin (mTOR) and the mTOR signalling pathway-related proteins, AKT, ribosomal protein S6 kinase B1 (RPS6KB1), and ribosomal protein S6 (RPS6), increased with increasing Met supplementation, and peaked at 80 ㎍/mL Met (group Met80). In addition, we also found that additional Met supplementation upregulated the gene expression of αS1-casein (CSN1S1), β-casein (CSN2), and the amino acid transporter genes SLC38A2, SLC38A3 which are known to be mTOR targets. Additional Met supplementation, however, had no effect on the gene expression of κ-casein (CSN3) and solute carrier family 34 member 2 (SLC34A2). Our results suggest that additional Met supplementation with 20 ㎍/mL may promote the synthesis of milk proteins in bovine mammary epithelial cells under hyperthermia by inhibiting apoptosis, activating the AKT-mTOR-RPS6KB1 signalling pathway, and regulating the entry of amino acids into these cells.

Studies on the Viability of Frozen Removed Seminal Plasma by Saline(RSP-S) and Tris-buffer(RSP-T) Semen of Small Spcies Dogs

  • Kim, S. K.
    • 한국동물번식학회:학술대회논문집
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    • 한국동물번식학회 2001년도 발생공학 국제심포지움 및 학술대회 발표자료집
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    • pp.57-57
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    • 2001
  • This study was carried out to investigate the general characteristics such as volume, sperm concentration, sperm motility, sperm abnormality on whole semen, RSP-S and RSP-T semen and fractional semen of small size dogs, and the effect of temperature and preservation time and cryoproservation on motility of whole and RSP-S and RSP- T semen. Multiple ejaculates were collected from small dogs by the digital manipulation of penis. 1. The volume per ejaculate semen, sperm of concentration and motility and abnormal sperm rate of 1st fractional semen were 0.65±0.09㎖, 4.52±0.35×10/sup 6/ cells/㎖, 15.64±3.85% and 5.50±0.62%. Also, 2nd fractional semen were 1.25±0.20㎖, 3.35±0.48×10/sup 6/cells/㎖, 96.25±4.65% and 4.24±0.46%. And 3rd fractional semen were 1.45±0.21㎖, 3.85±0.52×10/sup 6/cell/㎖, 92.82±4.24% and 4.66±0.58%, respectively. 2. The sperm of concentration and motility and abnormal sperm rates of whole, RSP-S and RSP-T semen were 5.45±0.82×10/sup 6/ cells/㎖, 95.55±4.65%, 4.58±0.45% and 4.82±0.36×10/sup 6/cells/㎖, 90.10±3.42%, 6.48±0.68% and 4.55±0.45× 10/sup 6/cells/㎖, 93.25±3.85%, 4.82±0.58%, respectively. 3. The motility of whole, RSP-S and RSP-T semen were higher at 4℃ than at 38℃. When preservation temperature was at 4℃, survival rates of RSP-S and RSP-T sperm were 97.54%-6.25% at 1-72 hrs, 97.40%-5.62% at 1-100 hrs, respectively. 4. The survival rates of slow and rapid frozen 2nd fraction, RSP-S and RSP-T semen were 67.3±4.45%, 88.8±4.46% and 46.4±3.84%, 74.4±4.20%, respectively. Survival rates was significantly higher in frozen RSP-S and RSP-T semen than that in control group(8.5±2.12%).

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앉은부채 (Symplocarpus Renifolius) 개체군의 동태 2.종자생산 (Population Dynamics of Symplocarpus renifolius (2. Seed production))

  • Kang, Hyun-Jung;Min, Byeong-Mee
    • The Korean Journal of Ecology
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    • 제17권4호
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    • pp.463-469
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    • 1994
  • For better understanding of population dynamics of Symplocarpus renifolius, some aspects of seed production were studied in natural populations for 3 years. The rate of reproducing plants (RP) was 8.06% among the whole studied. The RPs were 0.0% in leaf size class under 500cm2 per individual, and 3.6% in 500~1,000cm2, and 44.3% in over 3,000cm2. The resource allocated to sexual organ was 11.6% of total biomass at the end of growing season, and that to belowground was about 80% regradless of presence or absence of sexual organ. In the previous and the next years of seed production, the energy allocated to sexual organ didn't affect the changes of leaf size, year by year. After flowing season. Especially, a large number of sex organ were degraded in April, a period of pollination and fertilization. The number of seeds per individual was degraded in April, a period of pollination and fertilization. The number of seeds per individual was 13~22 and didn't relate to leaf size. But the weight per seed increased along leaf size per individual. Therefore, in S.renifolius population, large individual produced large seeds rather than many seeds.

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틸라피아의 에드와드병에 대한 백신과 Adjuvant의 효과 (The effects of adjuvants and vaccine against edwardsiellosis in tilapia, Oreochromis nioticus)

  • 이주석;박수일
    • 한국어병학회지
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    • 제5권1호
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    • pp.19-27
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    • 1992
  • 본 연구는 tilapia의 Edwardsiella tarda균체 항원(FKC)에 대한 항원성을 증가시키고, 백신의 투여 효과를 지속시키기 위해 백신을 3종류의 adjuvant 즉 FCA, FIA 및 PAS에 혼합하여 사용했을 때와 adjuvant만을 사용했을 때 그리고 E. tarda의 FKC를 투여 했을 때의 효과를 비교 조사하고자 하였다. Microtiter법에 의해 응집 항체가의 지속성을 측정하였고, 공격 시험에 대한 방어 효과는 E. tarda T1123균주의 농도별에 따른 상대 생존율(RPS)로서 판정하였다. 3종류의 adjuvant에 혼합시킨 백신 실험구는 FKC 단독 투여 실험구에 비하여 8주째 높은 응집 항체가를 지속시켰다. 가장 높은 응집 항체가는 2주째 FCA+FKC, PAS+FKC 및 FKC 실험구에서 나타났다. 상대 생존율이 60이상으로 나타난 실험구는 면역 처리 후 3주째 $2.5{\times}10^7\;CFU/ml$$2.5{\times}10^8\;CFU/ml$ 농도로서 공격 시험한 FCA+FKC, PAS+FKC 및 FKC 실험구와 8주째 $2.5{\times}10^7\;CFU/ml$ 농도로서 공격 시험한 FCA+FKC 및 PAS+FKC 실험구 이었다. Adjuvant만으로 면역 처리한 Tilapia의 E. tarda에 대한 저항성은 대조구보다 다소 높은 것으로 나타났다. Tilapia의 에드와드병에 대한 백신의 adjuvant로서 FCA와 PAS는 백신 효과를 장기간 지속시켜 방어력을 증강시킨 것으로 나타났다.

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