• Title/Summary/Keyword: Phytophthora capsici (PC)

Search Result 12, Processing Time 0.031 seconds

Development of Repetitive DNA Probes for Genetic Analysis of Phytophthora capsici (Phytophthora capsici의 유전적 특성 분석을 위한 Repetitive DNA Probe의 개발)

  • Song, Jeong-Young;Kim, Hong-Gi
    • The Korean Journal of Mycology
    • /
    • v.30 no.1
    • /
    • pp.66-72
    • /
    • 2002
  • To develop DNA markers for analysis of genetic characteristics of Phytophthora capsici population, randomly selected clones from HindIII-digested genomic DNA library of P. capsici 95CY3119 were surveyed by hybridizing to Southern blots of HindIII-digested total genomic DNA of P. capsici. Probe DNAs inserted into selected individual clones strongly hybridized with HindIII digests of P. capsici. Among probes examined, PC9 revealed the repetitive and highly polymorphic bands to HindIII digests of inter-and intra-field P. capsici isolates. Genetic diversity of individual isolates was also clearly revealed in cluster analysis based on its band patterns. The other probe, PC22, was hybridized only to DNA from P. capsici and this was highly repetitive. However, there was no response to other Phytophthora species and Pythium sp. These DNA probes could be used as very useful markers in analysing genetic diversity and identification for P. capsici population throughout the world.

Characterization of Phytophthora capsici effector genes and their functional repertoire

  • Arif, Saima;Lim, Gi Taek;Kim, Sun Ha;Oh, Sang-Keun
    • Korean Journal of Agricultural Science
    • /
    • v.48 no.3
    • /
    • pp.643-654
    • /
    • 2021
  • Phytophthora capsici is one of the most destructive hemibiotrophic pathogens; it can cause blight in chili peppers, and secrete various effector proteins to infect the plants. These effectors contain an N-terminal conserved RXLR motif. Here, we generated full-length RXLR effector coding genes using primer pairs, and cloned them into the pGR106 vector for in planta expression. Two of these genes, PcREK6 and PcREK41 (P. capsici RXLR effector from the Korea isolate), were further characterized. PcREK6 and PcREK41 genes showed that they encode effector proteins with a general modular structure, including the N-terminal conserved RXLR-DEER motif and signal peptide sequences. PcREK6 and PcREK41 expressions were strongly induced when the chili pepper plants (Capsicum annuum) were challenged with P. capsici. These results provide molecular evidence to elucidate the virulence or avirulence factors in chili pepper. Our results also showed that two effectors induce hypersensitive response (HR) cell death when expressed in chili leaves. Cell death suppression assays in Nicotiana benthamiana revealed that most effectors could not suppress programmed cell death (PCD) triggered by Bcl-associated X (BAX) or Phytophthora infestans elicitin (INF1). However, PcREK6 fully suppressed PCD triggered by BAX, while PcREK41 partially suppressed PCD triggered by INF1 elicitin. These results suggest that PcREK effectors from P. capsici interact with putative resistance (R) proteins in planta, and different effectors may target different pathways in a plant cell to suppress pattern-triggered immunity (PTI) or effector-triggered immunity (ETI).

Parameter focusing on the fungicidal activity of methanesulfonamide and phenylhydrazone derivatives (Methanesulfonamide와 phenylhyazone 유도체의 살균활성에 대한 parameter focusing)

  • Sung, Nack-Do;Kim, Sun-Young;Choi, Joong-Kwon;Ok, Whan-Suk
    • The Korean Journal of Pesticide Science
    • /
    • v.3 no.2
    • /
    • pp.86-89
    • /
    • 1999
  • A series of methanesulfonamide (I a- I g) and phenylhydrazone (IIa-IIh) derivatives were synthesized and their fungicidal activity in vitro against gray mold (BC: Botrytis cinerea), phytophthora blight (PC: Phytophthora capsici) and sheath blight (RS: Rhizoctonia solani) were measured by agar dilution method. The (II) deriviatives showed higher activity than ( I ) derivitives. And the relative orders of the fungicidal activity are BC=PC>RS, Among these compounds, 3-chlorophenyl substituent, IIg showed the most highest activity ($pI_{50}=3.96$) against PC. From the parameter focusing technique, major factors on the activity were ovality, polar and logP constant and so on.

  • PDF

Resistance to Phytophthora Blight of Commercial Pepper Cultivars in Korea (국내 시판 고추 품종의 역병 저항성)

  • Kim, Byung-Soo;Kwon, Tae-Ryong;Hwang, Ji-Eun;Lee, Jae-Moo;Park, Dong-Guen;Ahn, Joon-Hyung;Kim, Hye-Yeon
    • Research in Plant Disease
    • /
    • v.16 no.2
    • /
    • pp.141-147
    • /
    • 2010
  • Resistance to Phytophthora blight (Phytophthora capsici Leonian) of commercial cultivars of Capsicum pepper in Korea were evaluated from 2008 to 2010. In 2008 and 2009, the cultivars were tested for resistance to the Pc003 isolate collected in Youngyang, Gyeongbuk province. In 2010, the selected cultivars in the previous years were tested by inoculating with 3 isolates obtained from the pepper plants in Miryang in Gyeongnam province, Youngyang in Gyeongbuk province, and Goesan in Chungbuk province. A continuous variation in resistance from highly resistant to susceptible was observed among the commercial pepper cultivars. It was also noted that some cultivars, although their names were initiating with 'Yeokgang' or 'PR' meaning Phytophthora resistance, were very low in resistance or susceptible. When the resistant cultivars selected in 2008 and 2009 experiment were inoculated with the 3 isolates, all the commercial cultivars except a rootstock, 'Tantan', succumbed to the exceptionally virulent Pc005 (Miryang) isolate. Pc002 (Goesan) was a little more virulent than Pc003 (Youngyang). A few cultivars resistant to Pc003 (Youngyang) were severely infected by Pc002 (Goesan). Significant interaction in analysis of variance suggested the differential interactions between cultivars and pathogen isolates. Strategies to breed cultivars having high level of resistance to the highly variable pathogenic fungus, Phytophthora capsici, were discussed.

Comparative Molecular Field Analyses on the Fungicidal Activities of N-phenylthionocarbamate Derivatives based on Different Alignment Approaches (상이한 정렬에 따른 N-phenylthionocarbamate 유도체들의 살균활성에 관한 비교 분자장 분석)

  • Sung, Nack-Do;Soung, Min-Gyu;You, Jae-Won;Jang, Seok-Chan
    • The Korean Journal of Pesticide Science
    • /
    • v.10 no.3
    • /
    • pp.157-164
    • /
    • 2006
  • Three dimensional quantitative structure-activity relationships (3D-QSARs) for the fungicidal activities against Rhizoctonia solani (RS) and Phytophthora capsici (PC) by N-phenyl substituents(X) of N-phenylthionocarbamate derivatives were studied quantitatively using comparative molecular field analysis (CoMFA) methodology based on different alignment approaches. Statistical quality of CoMFA models with field fit alignment were slightly higher than that of atom based fit alignment. The optimized CoMFA models (RS: RF2 & PC: PF2) were derived from field fit alignment and combination of CoMFA fields. And the statistical results of the two models showed the best predictability of the fungicidal activities based on the cross-validated value $q^2$ ($r^2_{cv.}$ =RS: 0.557 & PC: 0.676) and non-cross-validated value ($r^2_{ncv.}$ =RS: 0.954 & PC: 0.968), respectively. The selective fungicidal activities between two fungi were dependence upon the electrostatic field of substrate molecule. Therefore, the fungicidal activities from CoMFA contour maps showed that the fungicidal activity will be able to increased according to the modification of X-substituents on the substrate molecules.

Some factors affecting mycelial growth and sporangium formation of Phytophthora capsici Leon. on culture media (고추 역병균(Phytophthora capsici Leon)의 유주자 형성 및 균사생장에 미치는 몇 가지 요인)

  • Hyun Yu Yun;Park Sang Keun;Choi Kwan Sun
    • Korean journal of applied entomology
    • /
    • v.20 no.2 s.47
    • /
    • pp.107-111
    • /
    • 1981
  • Effect of light and pH on mycelial growth and sporangium formation of Phytophthora capsici Leon, causal fungus of fruit rot of red pepper was carried out on culture media. The maximum mycelial growth occurred at $25^{\circ}C$ and pH 6.0 on potato sucrose agar. The fungus did not produce sporangia readily in dark condition. However, abundant sporulation occurred by illuminating continuous cool white fluorescent light with 2000 lux for 48 hrs. at $20{\pm}2^{\circ}C$. Oat meal agar was one of the best media for sporangia formation.

  • PDF

Comparative Molecular Similar Indice Analysis on Fungicidal Activity of N-phenyl-O-phenylthionocarbamate Derivatives against Rice Sheath Blight and Phytophthora Blight (벼잎집무늬마름병균 및 고추역병균에 대한 N-Phenyl-O-phenyl-thionocarbamate 유도체들의 살균활성에 관한 비교분자 유사성 분석)

  • Soung, Min-Gyu;Yoo, Jae-Won;Jang, Seok-Chan;Sung, Nack-Do
    • Applied Biological Chemistry
    • /
    • v.50 no.3
    • /
    • pp.187-191
    • /
    • 2007
  • Comparative molecular similarity indice analysis (CoMSIA) models on the fungicidal activities of N-phenyl substituents (X) in N-phenyl-O-phenylthionocarbamate derivatives against rice sheath blight (Rhizoctonia solani: RS) and phytophthora blight (Phytophthora capsici: PC) were derived. Also, the characterizations of H-bonds between substrates and ${\beta}-tubulin$ were discussed quantitatively. It was revealed that, from the contour maps of CoMSIA models, the H-bond acceptor field contributed the most highly to fungicidal activity for two fungi in common. It is predicted that the selectivity in the fungicidal activity between two fungi is caused by results from the roles of H-bond donor disfavor functional groups in RS and H-bond acceptor disfavor functional groups in PC when these two groups induced at meta- and para-position on the N-phenyl ring. And also, if the substituents (X) are steric disfavor group, negative charge favor groups are introduced at the metaposition in RS and H-bond acceptor group is introduced at the para-position in PC, the antifungal activity against two fungi will be likely able to be increased.

Restorer Genotype for Male Sterile Cytoplasm of Genetic Resources Moderately Resistant to Phytophthora capsici in Capsicum Pepper

  • Kim, Byung-Soo;Ahn, Joon-Hyung;Lee, Jae-Moo;Park, Dong-Guen;Kim, Hye-Yeon
    • Horticultural Science & Technology
    • /
    • v.30 no.1
    • /
    • pp.73-78
    • /
    • 2012
  • KC00256, KC00406, KC00462, KC00463, KC00820, and KC00821, the genetic resources that have previously been reported as moderately resistant to Phytophthora capsici, as well as the line KC01322, a new source of moderate resistance introduced from Laos, were tested against two strains (Pc003 and Pc005) of P. capsici. We also determined the nuclear restorer genotypes of these lines, in regards to their interaction with cytoplasmic male sterility, through crossing the resources with cytoplasmic male sterile Punggok-A (Srfrf) and determining the fertility of the $F_1$ hybrids. The studied lines exhibited a low level of resistance to both the strains of P. capsici compared to highly resistant CM334, but their response was fairly consistent for both P. capsici strains. KC00406, KC00462, KC00463, and KC01322 produced stable, male fertile $F_1$ plants indicating that they are restorers with genotype N(S)RfRf. KC00821 produced male sterile $F_1$ plants and was identified as a maintainer with genotype Nrfrf. The $F_1$ plants of the KC00820 cross, however, set a few male fertile flowers in the greenhouse at seedling stage, then became male sterile after being transplanted to the plastic greenhouse soil in May and remained so to the end of the growing season. Therefore, KC00820 is an unstable maintainer with genotype Nrfrf. The moderate resistance exhibited by these genetic resources may be integrated into breeding programs aimed at promoting higher levels resistance via recurrent selection or hybridization.

Quantitative Changes of PR Proteins and Antioxidative Enzymes in Response to Glomus intraradices and Phytophthora capsici in Pepper (Capsicum annuum L.) Plants

  • Zheng, Hu-Zhe;Kim, Yong-Woong;Lee, Hyun-Jin;Park, Ro-Dong;Jung, Woo-Jin;Kim, Young-Cheol;Lee, Sang-Hyun;Kim, Tae-Hwan;Kim, Kil-Yong
    • Journal of Microbiology and Biotechnology
    • /
    • v.14 no.3
    • /
    • pp.553-562
    • /
    • 2004
  • To investigate protective activity in pepper plants, which were pre-inoculated with arbuscular mycorrhizal (AM) fungi Glomus intra radices (Gi), against pathogenic strain Phytophthora capsici (Pc), pathogenesis-related (PR) proteins and antioxidant enzymes were examined. The growth of root and shoot was the highest in peppers inoculated with G. intraradices, compared with non-inoculated control plants and those challenged by the pathogen with and without mycorrhizae after nine days of infection. Mycorrhizal colonization rate was reduced by about 10% in pathogen-challenged plants, but disease pressure was reduced. The activities of PR proteins, $\beta$-1- 3-glucanase and chitinase, were increased in Pc-treated plants compared to Gi+Pc-treated plants in leaves, but those in roots were suppressed. Superoxide dismutase activity and $H_2O_2${/TEX> content in Gi+Pc and Pc-treated plants were gradually increased in leaves. However, those in roots continuously increased up to 5 days, and then decreased dramatically. Peroxidase activity in leaves and roots increased after P. capsici infection both in plants inoculated with or without G. intraradices. These results suggest that AM fungi, G. intra radices, potentially act as one of the protective agents against plant pathogens. Changes of PR proteins and antioxidative enzymes in mycorrhizae-inoculated pepper appear to be regulated differently in leaves and roots by pathogen infection.

Removal of Air Pollutants Using Photosensitizers/Photocatalysts (감광제/광촉매에 의한 공기오염물질 제거)

  • Park, Ju-Hyoung;Ahn, Ki-Chang;Lee, Jae-Koo
    • Korean Journal of Environmental Agriculture
    • /
    • v.19 no.4
    • /
    • pp.284-293
    • /
    • 2000
  • For the artificial removal of air pollutants such as pesticides, environmental toxicants, and pathogenic microorganisms in the greenhouse or the living environment, the accelerated photodegradation and the biocidal effects of some photosensitizers (PS)/photocatalysts (PC) were tested under the sunlight and/or artificial light. The selected photosensitizers/photocatalysts included the semiconductors (PC-1 and PC-2), the oxidizers (PC-3, PC-4, PC-5 and PC-6), the aromatic ketone (PS-7) and the aromatic amine (PS-8). In the case of dichlorvos, all the photocatalysts selected showed more accelerated photodegradation than the control without photocatalysts under both the sunlight and artificial light. Whereas, only the photocatalyst PC-1 accelerated the degradation of methyl tert-butyl ether about 17 times more than the control under both the sunlight and artificial light. Procymidone was much more degraded by the photosensitizer PS-8 and the two photocatalysts (PC-1, PC-6) than by PS-7. In the preliminary experiments to diminish the population of the microorganisms in the air, the photocatalyst PC-1 added to the suspensions of Pseudomonas putida, Phytophthora capsici, and Salmonella typhimurium obviously inhibited the microbial growth under the artificial light. The photocatalyst PC-1 showed a bactericidal activity against Salmonella typhimurium spread on the nutrient broth agar medium. These results suggest that the photosensitizers/photocatalysis under the light can remove some air pollutants and hence they can be used to reduce the exposure of the workers in the horticultural facilities and/or the public in the environment to the harmful pollutants.

  • PDF