• 제목/요약/키워드: Parent gene

검색결과 164건 처리시간 0.027초

흰가루병 저항성 동양종 호박 품종 육성 (Breeding for Powdery Mildew Resistant Varieties in Cucurbita moschata)

  • 조명철;엄영현;김대현;허윤찬;김정수;박효근
    • 식물병연구
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    • 제11권2호
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    • pp.106-114
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    • 2005
  • To breed powdery mildew resistant varieties, 104 accessions of Cucurbita spp. germplasm were evaluated. Powdery mildew resistance and horticultural characteristics of the accessions were investigated in the field conditions. C. martinezii was selected for high resistance to powdery mildew in the field. The growth of powdery mildew pathogen and response of leaf surface tissue to the pathogen were observed after artificial inoculation to resistant C martinezii and susceptible C. moschata cv. 'Wonye No.402'. Mycelium growth was very clearly different between resistant C. martinezii and susceptible C moschata cv. 'Wonye No. 402' at 5 days after inoculation at the adult stage. Interspecific hybridization was attempted to transfer powdery mildew resistance gene(s) from C. martinezii to C. moschata. A single dominant gene action was postulated as deter mining powdery mildew resistance at the seedling stage. But for the effective selection of powdery mildew resistant individuals, it was established that adult plant resistance should be confirmed in the field conditions after the seedling test. Through the seedling and field tests, C. moschata lines resistant to powdery mildew and superior to horticultural characteristics, were selected after 2 backcrossing and 3 selfing generations. The fruit characteristics of newly developed lines were similar to those of the recurrent parent, 'Jaechenjarae'.

Computational and experimental characterization of estrogenic activities of 20(S, R)-protopanaxadiol and 20(S, R)-protopanaxatriol

  • Zhang, Tiehua;Zhong, Shuning;Hou, Ligang;Wang, Yongjun;Xing, XiaoJia;Guan, Tianzhu;Zhang, Jie;Li, Tiezhu
    • Journal of Ginseng Research
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    • 제44권5호
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    • pp.690-696
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    • 2020
  • Background: As the main metabolites of ginsenosides, 20(S, R)-protopanaxadiol [PPD(S, R)] and 20(S, R)-protopanaxatriol [PPT(S, R)] are the structural basis response to a series of pharmacological effects of their parent components. Although the estrogenicity of several ginsenosides has been confirmed, however, the underlying mechanisms of their estrogenic effects are still largely unclear. In this work, PPD(S, R) and PPT(S, R) were assessed for their ability to bind and activate human estrogen receptor α (hERα) by a combination of in vitro and in silico analysis. Methods: The recombinant hERα ligand-binding domain (hERα-LBD) was expressed in E. coli strain. The direct binding interactions of ginsenosides with hERα-LBD and their ERα agonistic potency were investigated by fluorescence polarization and reporter gene assays, respectively. Then, molecular dynamics simulations were carried out to simulate the binding modes between ginsenosides and hERα-LBD to reveal the structural basis for their agonist activities toward receptor. Results: Fluorescence polarization assay revealed that PPD(S, R) and PPT(S, R) could bind to hERα-LBD with moderate affinities. In the dual luciferase reporter assay using transiently transfected MCF-7 cells, PPD(S, R) and PPT(S, R) acted as agonists of hERα. Molecular docking results showed that these ginsenosides adopted an agonist conformation in the flexible hydrophobic ligand-binding pocket. The stereostructure of C-20 hydroxyl group and the presence of C-6 hydroxyl group exerted significant influence on the hydrogen bond network and steric hindrance, respectively. Conclusion: This work may provide insight into the chemical and pharmacological screening of novel therapeutic agents from ginsenosides.

Machine Learning Perspective Gene Optimization for Efficient Induction Machine Design

  • Selvam, Ponmurugan Panneer;Narayanan, Rengarajan
    • Journal of Electrical Engineering and Technology
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    • 제13권3호
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    • pp.1202-1211
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    • 2018
  • In this paper, induction machine operation efficiency and torque is improved using Machine Learning based Gene Optimization (ML-GO) Technique is introduced. Optimized Genetic Algorithm (OGA) is used to select the optimal induction machine data. In OGA, selection, crossover and mutation process is carried out to find the optimal electrical machine data for induction machine design. Initially, many number of induction machine data are given as input for OGA. Then, fitness value is calculated for all induction machine data to find whether the criterion is satisfied or not through fitness function (i.e., objective function such as starting to full load torque ratio, rotor current, power factor and maximum flux density of stator and rotor teeth). When the criterion is not satisfied, annealed selection approach in OGA is used to move the selection criteria from exploration to exploitation to attain the optimal solution (i.e., efficient machine data). After the selection process, two point crossovers is carried out to select two crossover points within a chromosomes (i.e., design variables) and then swaps two parent's chromosomes for producing two new offspring. Finally, Adaptive Levy Mutation is used in OGA to select any value in random manner and gets mutated to obtain the optimal value. This process gets iterated till finding the optimal value for induction machine design. Experimental evaluation of ML-GO technique is carried out with performance metrics such as torque, rotor current, induction machine operation efficiency and rotor power factor compared to the state-of-the-art works.

Development of Near-Isogenic Lines (NILs) Conferring Xa4, xa5 and Xa21 Genes Resistant to Bacterial Blight (Xanthomonas oryzae pv. oryzae) in japonica rice Genetic Background

  • Kim, Ki-Young;Shin, Mun-Sik;Kim, Woo-Jae;Park, Hyun-Su;Ko, Jong-Cheol;Nam, Jeong-Kwon;Shin, Woon-Chul;Mo, Young-Jun;Jeung, Ji-Ung;Kim, Bo-Kyeong;Ko, Jae-Kwon
    • 한국육종학회지
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    • 제43권5호
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    • pp.383-390
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    • 2011
  • Near-isogenic lines (NILs) carrying bacterial blight resistance genes (Xa4, xa5 and Xa21) were developed in japonica rice using Suweon345 as genetic background. NILs were selected by gene specific DNA markers and inoculation of K1 or K3a race. NILs conferring Xa4 were resistant to K1, K2, K3, and moderately resistant to K3a. NILs conferring xa5 were resistant to K1, K2, K3, and K3a. NILs having Xa21 were susceptible to K1, while resistant to K2, K3 and K3a. Target genes of NILs with the genetic background of Suweon345 were also confirmed by using eleven Philippines races and International Rice Bacterial Blight (IRBB) NILs carrying Xa4, xa5 and Xa21. All NILs had no significant difference from their recurrent parents in the major agronomic traits except for panicle length and brown rice 1,000 grain weight. Heading date of NILs ranged from Aug. 10 to Aug. 11, which was similar to that of recurrent parent, Suweon345. Culm length, number of grains per panicle and ratio of ripened grain of NILs were similar to those of Suweon345. Milled rice of NILs was ranged from 4.82 to 4.93MT/ha. These NILs will be useful for improving resistance to K3a race of bacterial blight pathogens in Korean japonica cultivars.

Characterization of a New High-lysine Mutant in Barley (Hordeum vulgare L.)

  • Kim, Hong-Sik;Kim, Dea-Wook;Kim, Sun-Lim;Baek, Seong-Bum;Park, Hyoung-Ho;Hwang, Jong-Jin;Kim, Si-Ju
    • 한국육종학회지
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    • 제43권5호
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    • pp.375-382
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    • 2011
  • A chemical, MNU-induced hulless barley mutant line designated as 'Mutant 98 (M98)' was developed from a Korean hulless waxy barley cultivar, 'Chalssalbori'. The objective of the study was to determine the genetic basis of 'M98' and the possibility of using 'M98' as breeding parent to improve lysine level. Compared to 'Chalssalbori', 'M98' had large embryo and higher lysine content in both the embryo and endosperm. Significantly different lysine content in 'M98' and the other high-lysine barley mutant stocks was observed for two years. However, the genotype by year interaction was not significant. 'M98' was higher than the other high-lysine barley mutant stocks in the percentage of lysine of total amino acid composition (0.75%). The trait of shrunken endosperm of 'M98', which was typical in the high-lysine mutants, was inherited by a single recessive gene. Based on seed morphology and lysine content of $F_1$ seeds, 'M98' had a genetically different gene from the other high-lysine mutants for shrunken endosperm. Segregation of $F_2$ for plump/shrunken endosperm did not fit the expected ratio of Mendelian inheritance except for only one cross combination (GSHO1784 (lys1)/M98). The amino acid analysis of $F_5$ and $F_6$ progenies from the cross between 'M98' and 'Chalssalbori' revealed that the attempt to increase the range of lysine content of plump lines did not go beyond the limit of the average high-lysine barley germplasm.

Adverse effects of pesticide/metabolites on boar spermatozoa

  • Wijesooriya Mudhiyanselage Nadeema Dissanayake;Jung Min Heo;Young-Joo Yi
    • 농업과학연구
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    • 제50권4호
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    • pp.941-952
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    • 2023
  • The metabolites of agrichemicals, such as organophosphorus pesticides, are known to be more hazardous than their parent pesticides. 3,5,6-trichloro-2-pyridinol (TCP) is a major degradation product of chlorpyrifos, one of the organophosphate insecticides widely used in agriculture. In vivo or in vitro exposure to chlorpyrifos has been known to interfere with male reproductive functions, leading to reduced fertility in mammals. Therefore, this study was performed to examine the changes in the fertilization competence of boar spermatozoa exposed to TCP. Sperm samples were subjected to varying concentrations of TCP (10, 50, 100, 200 µM) and different periods of incubation. Sperm motility, motion kinematics, viability, acrosome integrity, intracellular reactive oxygen species (ROS) production, and gene expression levels (ODf2, ZPBP2, AKAP3 and AKAP4) were evaluated after exposure of the sperm to TCP. A significant dose-dependent reduction in motility was observed in sperm samples incubated with TCP compared to the controls after both incubation periods. Sperm viability was significantly decreased in samples incubated with 50, 100, and 200 µM TCP in both incubation periods. A significantly lower percentage of normal acrosomes and gene expression levels were observed in sperm samples exposed to 50, 100, and 200 µM TCP after both incubation periods, compared to the controls. There was a significant increase in the ROS production in spermatozoa incubated with 100 - 200 µM TCP after both incubation periods. Consequently, the direct exposure of boar spermatozoa to TCP interferes with sperm functions and leads to decreased fertilization. In order to identify and address the various causes of reproductive decline, the impact of chemical metabolites needs to be discussed in depth.

비친화적 및 친화적 레이스의 혼합접종에 따른 벼흰잎마름병 발병도의 변화 (Variation of Disease Severity by Mixed Inoculation of Compatible and Incompatible Races of Bacterial Blight in Rice)

  • 김보라;이은정;최재을
    • 한국작물학회지
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    • 제52권2호
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    • pp.162-168
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    • 2007
  • 본 연구는 벼흰잎마름병 저항성유전자 Xa1, Xa 3 및 Xa7을 가진 단인자 근동질 유전자계통에 일본의 대표균주(T7174, T7147, T7133)를 단독 및 혼합 접종하여 친화적 및 비친화적 균주의 상호작용에 따른 벼흰잎마름병 발병도에 미치는 영향을 조사하였다. Xa1 유전자를 갖는 IRBB 101 계통은 벼의 생육기간 전반에 걸쳐 T7147와 T7133 균주에는 친화적 관계로, T7174 균주에는 비친화적 관계로 작용하였다. Xa3 유전자를 갖는 IRBB 103 계통은 유묘기에서는 3 균주가 친화적 관계로 반응하였으나 출수기에 비교적 안정된 저항성을 나타냈다. Xa7 유전자를 갖는IRBB 107은 유묘기 접종에서는 3 균주가 비친화적 관계에 유사한 반응을 나타냈고, 최고분얼기 접종에서는 대부분 저항성으로 반응하였으며, 출수기에는 모두 강한 저항성으로 반응하여 비친화적 관계로 변화하였다. 친화적 균주와 비친화적 균주의 혼합접종에서는 비친화적 균주의 혼합비율이 증가할수록 병반장이 감소하는 경향 이였고, 친화적 및 비친화적 관계가 확실치 않는 경우는 병반장의 변화가 거의 없었다. 친화적 균주의 혼합접종에서는 친화적 균주의 단독 접종보다 대체로 병반장이 증가하는 경향이었으나, 비친화적 균주의 혼합접종에서는 단독 접종과 유사한 반응을 나타내어 병반장의 변화가 적었다. Xa7 유전자를 갖는 IRBB 107 계통은 벼의 생육기간동안 사용된 3 균주 모두에 저항성으로 반응하여 가장 안정된 저항성원인 것으로 판단된다.

phbC 유전자가 도입된 형질전환 Alcaligenes eutrophus를 이용한 고분율 4-hydroxybutyrate 함유 P(3-hydroxybutyrate-4-hydroxybutyrate)의 생산 (Cultivation of Alcaligenes eutrophus Transforming Cloned phbC Gene from Alcaligenes latus for Production of P(3-hydroxybutyrate-4-hydroxybutyrate) Containing High Molar Fraction of 4-Hydroxybutyrate)

  • 강명신;정영미;이용현
    • KSBB Journal
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    • 제14권4호
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    • pp.422-428
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    • 1999
  • Alcaligenes latus 유래의 phbC 유전자를 A. eutrophus에 재도입시킨 형질전환균주를 이용하여 높은 4HB 몰분율을 갖는 P(3HB-4HB)의 고농도 생산을 시도하였다. 형질전환균주는 총균체량, P(3HB-4HB) 농도, 그리고 축적률에서 모균주에 비해 다소 증가한 반면 P(3HB-4HB)내의 4HB 몰분율은 23.5 mol%로 모균주의 12.3 mol%에 비해 현저히 증가하였다. 이는 phbC유전자의 증폭으로 인해 해당과정에서 생성된 3HB와 전구물질인 ${\gamma}$-butyrolacton에서 전환된 4HB의 중합반응이 촉진되기 때문으로 사료된다. 또한 ${\gamma}$-butyrolacton의 농도 $Mg^{2-}$ 이온, 그리고 citrate 첨가량이 P(3HB-4HB)의 농도, 축적률, 그리고 4HB 몰분율에 미치는 영향을 검토하였다. P(3HB-4HB)내의 4HB 몰분율을 증대시키기 위하여 일반적으로 사용되는 2단계 배양법을 변형시켜 ${\gamma}$-butyrolacton과 citrate의 첨가시기를 늦춘 2단계 배양법을 활용하여 P(3HB-4HB)내의 4HB 몰분율을 61.0 mol%로 증가시킬 수 있었다. 또한 ${\gamma}$-butyrolacton의 첨가량을 조절하여 P(3HB-4HB)내의 4HB 몰분율이 92.0 mol%에 이르는 homopolymeric P(4HB)를 생산할 수 있었으며, 그 구조를 $^1$H-NMR을 통해 확인하였다.

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한국인 알코올중독 환자의 예후인자에 관한 연구 : 심리적, 사회적, 생물학적 요인을 중심으로 (A Study for The Prognostic Indicators of Korean Alcoholics in Psychological, Social and Biological Aspects)

  • 성상경;장환일
    • 생물정신의학
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    • 제2권2호
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    • pp.218-236
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    • 1995
  • The author studied prognostic indicators of sixty Korean male alcoholics in psychological, social and biological aspects who were divided into abstinent and drinking groups. Thirty patients were assigned to each group. They were controlled in age and sex. Both groups were compared in terms of the demographic characteristics, past drinking history, treatment history, famaily history, ego strength and personality factors differences and distribution of dopamine $D_2$ receptor gene Al allele. Also the author studied relation of clinical course, alcoholic family history and dopamine $D_2$ receptor gene Al allele in both groups. The results were as follows; 1) The abstinent group had higher rate of married state, higher economic status, longer education years and maintained more stable job than the drinking group. But made no differences in occupation and religion. 2) The abstinent group showed higher rate of living with family members than the drinking group, and wives and fellows of the alcoholics anonymous were important factors for maintenance of abstinence. Family loading and parent's characters were not different. 3) The abstinent group had longer maximal length of abstinence but mean amount of alcohol consumption per day were larger than the drinking group. But there were no differences in duration of past drinking, drinking pattern, main drinking time, first drinking age and preference of the kind of alcoholic beverage in the past drinking history. 4) The abstinent group showed stronger treatment motivation, absolute abstinence in treatment goal, more voluntary adimission and maintained longer therapeutic relationship otter discharge than the drinking group. But both groups showed negative attitude toward antabuse therapy. 5) The abstinent group had higher mean score in ego strength scale than the drinking group. 6) In the personality factor questionnaire, the abstinent group showed strong laugh poise and the trait of praxernia, conservatism personality but the drinking group showed tough poise, the trait of weak ego strength(unstableness) and tough mindedness personality. 7) In comparision of dopamine $D_2$ receptor gene A1 allele, the prevalence of A1 allele was seventy percent and the frequency was 0.38 in the abstinent group. The prevalence of A1 allele was sixty percent and the frequency was 0.42 in the drinking group. Both groups were not significantly different in A1 allele prevalence and frequency. 8) In comparision of dopamine $D_2$ receptor gene A1 allele according to alcoholic family history, the prevalence of A1 allele was seventy percent and the frequency was 0.43 in the family history positive group. The prevalence of A1 allele was sixty-one percent and the frequency was 0.38 in the family history negative group. Both groups were not significantly different in A1 allele prevalence and frequency. In comparision of past drinking history according to alcoholic family history, the family history positive group showed earlier first drinking and problem drinking, but the family history negative group hod longer duration of past drinking. The mean amount of alcohol consumption per day, the longest duration of abstinence and Alcoholism Screening Test of Seoul Natoinal Mental Hospital(NAST) results were not significant. In conclusion, the results suggest that successful prognostic indicators of Korean alcoholics are married state, higher economic status, longer education years, stable job, living with family members, longer abstinence during past drinking history, strong treatment motivation, absolute abstinence in treatment goal, voluntary adimission, maintained therapeufic relationship, strong ego strength and the trait of praxernia, conservatism personality. But occupation, religion, alcoholic family history, parent's characters, duration of past drinking, drinking pattern, main drinking time, first drinking age, preference of the kind of alcoholic beverage, attitude to antabuse therapy and distribution of dopamine $D_2$ receptor A1 allele were not significantly related to the prognostic indicators of Korean alcoholics.

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벼 도열병 저항성 유전자 Pi45(t)의 균계 특이적 반응과 고밀도지도 작성 (Mapping and Race Specific Reaction of the Resistance Gene Pi45(t) in Rice)

  • 김동민;구홍광;양바오로;한성숙;노재환;안상낙
    • 한국육종학회지
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    • 제43권1호
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    • pp.42-49
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    • 2011
  • 본 연구는 모로베레칸의 잎도열병 저항성유전자를 탐색하고, 이 저항성유전자와 연관된 분자표지를 탐색하기 위해 수행되었다. 도열병에 이병성인 일품벼와 도열병에 강한 모로베레칸을 교잡하여 육성된 140개 $BC_3F_3$ 계통을 도열병 균계 반응을 통한 저항성 유전자 탐색에 이용하였다. 1. 40개 도열병 균계를 이용하여 양친을 검정한 결과, 모로베레칸은 모든 균계에 대하여 저항성 반응을 보였고, 일품벼는 35개 균계에 이병성 반응을 보였다. 2. 90-089 등 9개 균계를 선발하여 140개 $BC_3F_3$ 계통에 대한 저항성반응을 조사하였다. 실험 결과 88-002, 93-038, 90-089 및 03-018에 대해서는 몇몇 계통을 제외한 대부분의 계통들이 감수성 쪽으로 다소 치우친 경향을 보였다. 90-002, 86-311, 86-228 및 03-018 균계에 대해서는 대부분의 계통들이 저항성 쪽으로 치우친 경향을 보였다. 3. QTL 분석 결과, 7개 균계에 대해서 총 17개의 QTL이 탐색되었는데, 모든 저항성 유전자좌에서 모로베레칸의 대립 유전자가 저항성을 증진시켰다. 특히 4번 염색체 RM3276-RM5709 부근에서 도열병 균계 R90-059, 88-002, 93-038 및 90-089에 대한 저항성 QTL이 군집되어 있었다. 4. 연계재배법을 이용하여 탐지된 내구저항성 유전자 Pi45(t) 유전자좌의 위치에 모로베레칸 단편이 이입된 계통과 일품을 교배하여 목표 유전자좌에서 분리하는 $F_2$ 집단을 육성하고 유전자형을 검정하였다. 목표 유전자좌를 포함하는 염색체 지역에서 재조환이 일어난 개체를 이용하여 내구저항성 검정에 이용된 3개 균계를 접종한 결과, Pi45(t) 유전자좌를 포함하는 계통은 2개의 도열병 균계에 대해 저항성을 보였다. 이 결과는 내구저항성 관련 유전자와 균계 특이적 저항성유전자가 밀접히 연관되어 있던지 혹은 저항성에 동일한 유전자가 관여함을 보여준다. 이들 유전자들의 관계를 밝히기 위해서는 관련 유전자의 분리를 통한 특성 규명이 필요하다.