• Title/Summary/Keyword: O. quercus

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Identification and Characterization of Polymorphic Microsatellite Loci using Next Generation Sequencing in Quercus variabilis (차세대 염기서열 분석을 이용한 굴참나무(Quercus variabilis)의 microsatellite 마커 개발 및 특성 분석)

  • Baek, Seung-Hoon;Lee, Jei-Wan;Hong, Kyung-Nak;Lee, Seok-Woo;Ahn, Ji-Young;Lee, Min-Woo
    • Journal of Korean Society of Forest Science
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    • v.105 no.2
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    • pp.186-192
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    • 2016
  • This study was conducted to develop microsatellite markers in Quercus variabilis using next generation sequencing. A total of 305,771 reads (384 bp on average) were generated on a Roche GS-FLX system, yielding 117 Mbp of sequences. The de novo assembly resulted in 7,346 contigs. A total of 606 contigs (20.75%) including 911 microsatellite loci were derived from the 2,921 contigs longer than 500 bp. A total of 180 primer sets were designed from the 911 microsatellite loci and screened in eight Q. variabilis individual trees sampled from a natural stand to obtain polymorphic loci. As a result, a total of thirteen polymorphic microsatellite loci were selected and used for estimating population genetic parameters in the 54 individual trees. The mean number of effective alleles was 4.996 ranging from 2.439 to 7.515. The observed heterozygosity and the expected heterozygosity ranged between 0.731 and 1.000 with an average of 0.873 and from 0.590 to 0.867 with an average of 0.766, respectively. Null alleles were not detected in all loci. No significant linkage disequilibrium was detected after Bonferroni correction in all loci. In the near future, these novel polymorphic microsatellite markers will be used to study population and conservation genetics of Q. variabilis of Korea in more detail.

Isolation of Flavonol Rhamnosides from Loranthus tanakae and Cytotoxic Effect of Them on Human Tumor Cell Lines

  • Kim, Young-Kyoon;Kim, Young-Sup;Choi, Sang-Un;Ryu, Shi-Yong
    • Archives of Pharmacal Research
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    • v.27 no.1
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    • pp.44-47
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    • 2004
  • Loranthus tanakae Fr. et Sav. (Loranthaceae) is a species of mistletoe, a semiparasitic plant growing on the branches of Quercus and Betula species as host trees. In our ongoing search for bioactive compounds from endemic species in Korea, we have investigated to isolate the chemical constituents responsible for the antitumor effect of the MeOH extract of L. tanakae. The ethyl acetate soluble part of the MeOH extract demonstrated a marginal inhibition on the proliferation of the tumor cell lines such as A549 (non small cell lung), SK-OV-3 (ovary), SK-MEL-2 (melanoma), XF498 (central nerve system), and HCT-15 (colon) in vitro. Thus, the activity-guided isolation procedure upon the ethyl acetate soluble part of the extract has been carried out and finally four flavonoid rhamnopyranosides (1-4) were isolated as active principle. The structures of 1-4 were elucidated by the physicochemical and spectral data as rhamnetin 3-O-$\alpha$-L-rhamnoside (1), quercetin 3-O-$\alpha$-L-rhamnoside (2), rhamnocitrin 3-O-$\alpha$rhamnoside (3), and kaempferol 3-O-$\alpha$-L-rhamnoside (4).

Growth Performances and Physiological Responses of Quercus spp. and Fraxinus rhynchophylla Subjected to Different Soil Moisture Regimes and Nutrition Levels (수분(水分) 및 양료(養料) 처리(處理)에 따른 참나무류와 물푸레나무의 생장 및 생리 반응)

  • Kwon, Ki Won;Lee, Jeoung Ho
    • Journal of Korean Society of Forest Science
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    • v.83 no.2
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    • pp.164-174
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    • 1994
  • Temporal changes in growth performances, chlorophyll contents, and tissue water relations for determining their physiological responses of five economic tree species subjected to chronic water and nutrition stresses were investigated with containerized seedlings grown in different soil moisture regimes and nutrition levels. Seedlings of Quercus acutissima, Q. variabilis, Q. mongolica, Q. serrata, and Fraxinus rhynchophylla were propagated in plastic pots(I.D. $16cm{\times}Depth$ 16cm) for the experiments. The seedlings were subjected to two soil moisture regimes of dry and wet soils and two nutrition levels of fertilization with N+P+K and no fertilization through the growing season from May to September in a green house. For the purpose of analyzing their responses to the environmental stresses, seedling heights and root collar diameters, chlorophyll contents, and P-V curve parameters of the seedlings were measured in May, July, and September. The environmental stresses coming from moisture and nutrient deficits affected the growth performances of seedlings variously among species and among different growing periods, as well as between height and basal diameter growth of seedlings. The growth performances of Q. acutissima were influenced sensitively on the stresses, but those of Q. mongolica less influenced in comparison with other species. Chlorophyll contents were generally higher in Quercus spp. than F. rhynchophylla through the growing season. The chlorophyll contents changed by species and by treatment through the season within ranges of 0.14~1.96 mg/g dry wt. of chlorophyll a and within 0.16~1.79mg/g dry wt. of chlorophyll b, respectively. But the contents seemed to be decreased gradually through the chronic environmental stresses and leaf senescence. The osmotic potential at full turgor(${\Psi}{{\pi}o}$) and turgor loss point(${\Psi}{\pi}p$) had temporarily declined up to 3 to 5bars from -7.0~-12.4bars in May to -10.2~-17.5bars in September and up to 5 to 6bars from -7.6~-14.2bars in May to -12.9~-20.4bars in September, respectively, with some exceptions. The values of ${\Psi}{\pi}p$ were generally high in F. rhynchophylla in May and July, but high in Q. serrata in September. Relative water contents at turgor loss point(RWCp) were generally high in F. rhynchophylla, but the temporal changes of RWCp were quite and frequently different among species and among treatment.

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The Fruiting Body Formation of Oudemansiella radicata in the Sawdust of Oak (Quercus variabilis) Mixed with Rice Bran

  • Shim, Jae-Ouk;Chang, Kwang-Choon;Kim, Tae-Hyun;Lee, Youn-Su;Lee, U-Youn;Lee, Tae-Soo;Lee, Min-Woong
    • Mycobiology
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    • v.34 no.1
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    • pp.30-33
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    • 2006
  • To screen additives and their mixed ratio suitable for the mycelial growth and fruiting body formation of Oudemansiella radicata in the oak sawdust, additives such as rice bran, fermented soybean powder and wheat bran were used. Generally, the mycelial growth of O. radicata has been stable on oak sawdust mixed with rice bran of $5{\sim}20%$. In case that O. radicata was cultured for about 30 days at $22{\pm}1^{\circ}C$ under the illumination (350 lux) of 12 hours and moisture condition of $90{\pm}5%$, the primordia have been formed gradually from red-brown crusts covering the surface of oak sawdust media. Based on the experimental results from 9 strains of O. radicata, fruiting bodies were produced widely on oak sawdust medium mixed with rice bran of 5 to 30%. Even though fruiting bodies of O. radicata have been produced well on oak sawdust media mixed with rice bran, fruiting bodies of O. radicata were produced intensively on oak sawdust media mixed with rice bran of 10%. Therefore, this result will provide a basic information for commercial production of fruiting body of wild O. radicata. This result is the first report associated with an artificial fruiting body formation of O. radicata in Korea.

Biomass and Net Production of a Natural Quercus mongolica Forest in Namsan, Seoul (서울 남산지역 신갈나무 천연림의 물질생산)

  • Park In-Hyeop;Kim Dong-Yeob;Son Yow-han;Yi Myong-Jong;Jin Hyun-O;Choi Yun-Ho
    • Korean Journal of Environment and Ecology
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    • v.19 no.3
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    • pp.299-304
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    • 2005
  • Biomass and net production of the three 46-to 52-year-old natural Queycus mongojica stands were investigated in Namsan Park at Seoul. Total above- and belowground biomass including understory vegetation for the three stands ranged from 14776t1ha to 278.48t/ha and total net production ranged from 6.96t/ha/yr to 11.11t/yr. Understory vegetation biomass for the three stands ranged from $0.14\%\;to\;1.14\%$ of total biomass. Biomass accumulation ratio for the three stands ranged from 20.72 to 25.07 and net assimilation ratio as an index of foliage photosynthetic efficiency ranged from 2.79 to 3.34. Net production and net assimilation ratio of this study stands which were located in Namsan Park of central Seoul were low compared to the natural Quercus mongojica forests in other districts in Korea.

Ecological Study of the Pinus thunbergii Forests on the western Seacoast of Korea -Taean Haean National Park- (우리 나라 서해안 지역의 곰솔나무림의 생태학적 연구 -태안해안(泰安海岸) 국립공원(國立公園)을 중심으로-)

  • Song, Ho Kyung;Jang, Kyu Kwan;Oh, Dong Hoon
    • Korean Journal of Agricultural Science
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    • v.24 no.1
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    • pp.11-15
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    • 1997
  • The importance value and volume growth percentage, based on the data obtained from 33 quadrats by $relev{\acute{e}}$ method of Mueller-Dombois and Ellenberg, were applied to investigate Pinus thunbergii forests in Taean Haean National Park. The investigation was done from July till September 1996. 1. The dominant species of tree were found in the order of Pinus thunbergii, Quercus dentata, Robinia pseudcacacia, Platycarya strobilacea, Carpinus coreana, Albizzia julibrissin, Pinus densi-thunbergii, and Quercus serrata 2. The volume growth percentage of Pinus thunbergii was about 0.6%~10.5% and the mean of it's was 3.8%. 3. Chemical properties of forest soil showed ranging pH 4.8~6.3, organic matter 1.51~11.79%, $P_2O_5$ 2.5~14.5ppm, $Ca^{{+}{+}}$ 1.3~6.6(me/100g), $Mg^{{+}{+}}$ 0.4~2.6(me/100g), and $K^+$ 0.23~1.89(me/100g).

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Protective Activity against Ionizing Radiation of Antioxidative Plants Indigenous to Korea

  • Jung, Myung-Sun;Kang, Kyoung-Ah;Zhang, Rui;Chae, Sung-Wook;Yoo, Byoung-Sam;Yang, Young-Taek;Lee, Nam-Ho;Park, Jae-Woo;Hyun, Jin-Won
    • Natural Product Sciences
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    • v.12 no.1
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    • pp.1-7
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    • 2006
  • We have screened the cytoprotective effect on ${\gamma}-ray$ radiation induced oxidative stress from forty one Korean plant extracts. Carpinus laxiflora (caulis), Quercus salicina (caulis), and Castanopsis cuspidata (caulis) were found to scavenge 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical and intracellular reactive oxygen species (ROS). As a result, extracts of three plants reduced cell death of Chinese hamster lung fibroblast (V79-4) cells induced by $H_2O_2$ treatment. In addition, these extracts protected cell death of V79-4 cells damaged by ${\gamma}-ray$ radiation. In addition, these extracts scavenged ROS generated by radiation. Taken together, the results suggest that Carpinus laxiflora, Quercus salicina, and Castanopsis cuspidata protect V79-4 cells against oxidative damage by radiation through scavenging ROS.

Change of Heating Value, pH and FT-IR Spectra of Charcoal at Different Carbonization Temperatures

  • Kwon, Sung-Min;Jang, Jae-Hyuk;Lee, Seung-Hwan;Park, Sang-Bum;Kim, Nam-Hun
    • Journal of the Korean Wood Science and Technology
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    • v.41 no.5
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    • pp.440-446
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    • 2013
  • To understand transition characteristics from wood to charcoal, Quercus variabilis wood was carbonized at 200, 250, 300, 340, 540 and $740^{\circ}C$, respectively. Heating value, pH and surface property by FT-IR spectroscopy of the carbonized charcoal were investigated. Heating value and pH increased with increasing carbonization temperature from 4500 cal/g and 4.3 of the control wood to 8,000 cal/g and 9 of the charcoal carbonized at $740^{\circ}C$, respectively. From FT-IR spectroscopy, the peaks from O-H, C-H and C-O stretching disappeared during carbonization at 540 and $740^{\circ}C$. Aromatic skeletal vibration at near $1,506{\sim}1,593cm^{-1}$ was repidly increased until $540^{\circ}C$. These results suggest that the chemical and physical characteristics of wood components in cell wall can be easily changed by increasing carbonization temperature and the carbonization seem to be incomplete at temperature below $540^{\circ}C$.

Relationship between Environment Factors and Distribution of Pinus densiflora after Fire in Goseong, Gangwon Province, Korea (산불 후 입지에 따른 소나무 분포와 환경 요인 - 강원도 고성군을 중심으로 -)

  • Shin, Moon-Hyun;Lim, Joo-Hoon;Kong, Woo-Suk
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.17 no.2
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    • pp.49-60
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    • 2014
  • This study was conducted to evaluate the effect of forest fire on natural distribution and regeneration of Pinus densiflora Sieb. & Zucc. in Goseong, Gangwon province, Korea. After 13 years of the last forest fire in 2000, five investigation plots ($10m{\times}10m$) in each of rocky land and ridge, the well-known location as a favorite site for natural distribution of P. densiflora, were set to investigate stand characteristic and soil environment including physico-chemical properties and moisture contents of soil. Also, five investigation plots in slope area were set and investigated as well. The concentration of organic matter, total nitrogen, and exchangeable nutrients ($K^+$, $Ca^{2+}$, $Mg^{2+}$) were highest in the slope while the soil in the rocky land showed the lowest concentration of organic matter, total nitrogen, available $P_2O_5$, and exchangeable nutrients ($K^+$, $Na^+$, $Ca^{2+}$, $Mg^{2+}$). The soil in the slope only showed higher concentration of total nitrogen, $K^+$ and $Ca^{2+}$ than the unburned area in Goseong. Mean soil moisture contents in the rocky land (5.77%) were lowest while the slope (15.78%) and the ridge (15.27%) showed almost three times as much than the rocky land. P. densiflora was dominant in the rocky land and Quercus spp. were dominant in the ridge and slope. The average proportion of P. densiflora was highest in rocky land (58.4%, 14.6 trees per plot) followed by the ridge (25.2%, 7.8 trees per plot) and the slope (11.3%, 3.4 trees per plot) while the average height of P. densiflora was highest in slope (277cm) followed by the ridge and the rocky land. The height and crown width of Quercus spp. were higher than P. densiflora in the every plot. The results suggest that P. densiflora may be able to naturally regenerate and survive in the rocky land after the fire while P. densiflora in the ridge and the slope are suppressed by Quercus spp.

Analysis of the Forest Vegetation of Mt. Ilwol (일월산의 삼림식생 분석)

  • Lee, Ho-Joo;Heung-Lak Choung;Doo-Weon Byun;Chang-Ho Kim
    • The Korean Journal of Ecology
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    • v.16 no.3
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    • pp.239-259
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    • 1993
  • The vegetation types and distributional characteristics of the forest vegetation on Mt. Ilwol were investigated by the Z-M school method. Geographical distribution of the vegetation was a central/montane(CEMO) type of the Korean Peninsula subtype. The forest was classified into five vegetation units: Artemisio-Quercetum mongolicae (Artemisio-Quercetum typicum subass. nov., Artemsio-Quercetum pinetosum dens~florae subass. nov. ). Lychno-Quercetum mongolicae (Lychno-Quercetum Calamagrostetosum arundinaceae subass. nov.. Lychno-Quercetum ligularetosum f~scherii subass. nov.), Fraxinus rhynchophylla community, Quercus variabilis community and Larix leptolepis afforestation. Species with percentage constance degree more than 61% are Quercus mongolica (89.5%, V), Lespedeza maximowiczii (73.7%, IV), Isodon japonicus(73.7%, IV), Fraxinus rhynchophylla (68.%, IV), Arlemisia stolonifera (65, 8%, IV), etc. Artemisio-Quercetum mongolicae was chiefly distributed on the ridge lines of low altitudes (570~700m) and on the ground with exposed rocks in sloping surface (800~1, 000m). Both Fraxinus sievoldiana and Rhododendrou schlippenbachii of the Artemisio-Quercetum mongolicae showed a predominant condition all over the subtree and shrub layers. Of Artemisio-Quercetum pinetosum densifloraes, Pinus densiflora becomes powerful over the tree layer and, on the other hand, Quercus mongolica over the subtree layer. Lychno-Quercetum mongolicae was distributed somewhat on the humid region of the high altitude area (840~1.200m). Fraxinus rhynchophylla community was chiefly distributed in the vicinity of the ravines. Quereus rariabilis community was distributed at subxeric slope on southeast side of the mountain. Larix leptolepis has been reforested at the ecotone between Artemisio-Quercetum mongolicae and Lychno-Quercetum mongolicae. Percentage cover degrees of the subtree layer In Lychno-Quercetum mongolicae, Quereus rariabilis community and Larix leptolepis afforestation were relatively low, 15.3%, 5% and 2.5%, respectively.The contents of moisutre and organic matter in the soil were much higher in Luchno-Quercetum monogolicae and Larix leptolepis afforestaion than in the other communities. Contents o Ca, Mg, K and the available phosphorus were relaively high compared with forests of the other area. This result seems to be influenced by a forest fire. As the altitude increases, the moisure content in the forest soil also increases.

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