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Days to Heading and Glossiness Variation of RILs derived from Hwayeong and Wandoaengmi 6

  • Chang-Min Lee;Hyun-Su Park;Man-Kee Baek;Jeonghwan Seo;Jae-Ryoung Park;O-Yeong Jeong;Min-A Jin;Song-Hee Park;Oporta Juan
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2022.10a
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    • pp.222-222
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    • 2022
  • Improving the taste of rice in the breeding process is one of the important goals. However, it takes a lot of time and effort to select lines with good grain quality. MAS related to rice quality can help quickly and accurately select the elite lines in breeding programs. QTL qTV9, derived from Wandoaengmi 6, has been reported as a marker associated with improved glossiness of rice (Park et al., 2019). To confirm the function of QTL qTV9, 186 RILs derived from Hwayeong/Wandoaengmi6 were cultivated on ordinary planting cultivation for five years. The average DTH of Hwayeong and Wandoaengmi 6 was not significant at 99 and 97 days, respectively, but the averages of TV (toyo value) were 72.6 and 86.0, respectively. The DTH and TV of RIL vary from year to year. In 2017-2018, the average DTH was 98 days, which was significantly higher than the other three years. In 2018 and 2021, the average TV was 79.5 and 86.5, respectively, which were significantly higher than in other years. As a result of correlation analysis, DTH in the different years showed highly significant positive correlations (r = 0.71-0.92) from 0.71 to 0.92, whereas TV showed positive but weaker correlations (r = 0.42-0.71). The correlation between DTH and TV in each year was significant but weak (r = 0.25-0.64) and there was no correlation in 2017. The TV (77.6-88.7) of RILs with QTL qTV9 was significantly higher than that of RILs without qTV9 (72.6-84.9) for all five years. As a result of analyzing TV by DTH group, the TV of the lines with qTV9 in DTH groups (93-97) and (98-103) showed a significantly higher trend for all 5 years. And TV was not significant in DTH groups A, B, E, and F. This may have been influenced by factors such as insufficient populations between groups or differences in harvest timing. This study is expected to be used as data for improving the glossiness of cooked rice in breeding programs, and further study of the QTL qTV9 marker is required.

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Estimation of Genetic Parameters for Somatic Cell Scores of Holsteins Using Multi-trait Lactation Models in Korea

  • Alam, M.;Cho, C.I.;Choi, T.J.;Park, B.;Choi, J.G.;Choy, Y.H.;Lee, S.S.;Cho, K.H.
    • Asian-Australasian Journal of Animal Sciences
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    • v.28 no.3
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    • pp.303-310
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    • 2015
  • The study was conducted to analyze the genetic parameters of somatic cell score (SCS) of Holstein cows, which is an important indicator to udder health. Test-day records of somatic cell counts (SCC) of 305-day lactation design from first to fifth lactations were collected on Holsteins in Korea during 2000 to 2012. Records of animals within 18 to 42 months, 30 to 54 months, 42 to 66 months, 54 to 78 months, and 66 to 90 months of age at the first, second, third, fourth and fifth parities were analyzed, respectively. Somatic cell scores were calculated, and adjusted for lactation production stages by Wilmink's function. Lactation averages of SCS ($LSCS_1$ through $LSCS_5$) were derived by further adjustments of each test-day SCS for five age groups in particular lactations. Two datasets were prepared through restrictions on number of sires/herd and dams/herd, progenies/sire, and number of parities/cow to reduce data size and attain better relationships among animals. All LSCS traits were treated as individual trait and, analyzed through multiple-trait sire models and single trait animal models via VCE 6.0 software package. Herd-year was fitted as a random effect. Age at calving was regressed as a fixed covariate. The mean LSCS of five lactations were between 3.507 and 4.322 that corresponded to a SCC range between 71,000 and 125,000 cells/mL; with coefficient of variation from 28.2% to 29.9%. Heritability estimates from sire models were within the range of 0.10 to 0.16 for all LSCS. Heritability was the highest at lactation 2 from both datasets (0.14/0.16) and lowest at lactation 5 (0.11/0.10) using sire model. Heritabilities from single trait animal model analyses were slightly higher than sire models. Genetic correlations between LSCS traits were strong (0.62 to 0.99). Very strong associations (0.96 to 0.99) were present between successive records of later lactations. Phenotypic correlations were relatively weaker (<0.55). All correlations became weaker at distant lactations. The estimated breeding values (EBVs) of LSCS traits were somewhat similar over the years for a particular lactation, but increased with lactation number increment. The lowest EBV in first lactation indicated that selection for SCS (mastitis resistance) might be better with later lactation records. It is expected that results obtained from these multi-trait lactation model analyses, being the first large scale SCS data analysis in Korea, would create a good starting step for application of advanced statistical tools for future genomic studies focusing on selection for mastitis resistance in Holsteins of Korea.

Ordinary kriging approach to predicting long-term particulate matter concentrations in seven major Korean cities

  • Kim, Sun-Young;Yi, Seon-Ju;Eum, Young Seob;Choi, Hae-Jin;Shin, Hyesop;Ryou, Hyoung Gon;Kim, Ho
    • Environmental Analysis Health and Toxicology
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    • v.29
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    • pp.12.1-12.8
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    • 2014
  • Objectives Cohort studies of associations between air pollution and health have used exposure prediction approaches to estimate individual-level concentrations. A common prediction method used in Korean cohort studies is ordinary kriging. In this study, performance of ordinary kriging models for long-term particulate matter less than or equal to $10{\mu}m$ in diameter ($PM_{10}$) concentrations in seven major Korean cities was investigated with a focus on spatial prediction ability. Methods We obtained hourly $PM_{10}$ data for 2010 at 226 urban-ambient monitoring sites in South Korea and computed annual average $PM_{10}$ concentrations at each site. Given the annual averages, we developed ordinary kriging prediction models for each of the seven major cities and for the entire country by using an exponential covariance reference model and a maximum likelihood estimation method. For model evaluation, cross-validation was performed and mean square error and R-squared ($R^2$) statistics were computed. Results Mean annual average $PM_{10}$ concentrations in the seven major cities ranged between 45.5 and $66.0{\mu}g/m^3$ (standard deviation=2.40 and $9.51{\mu}g/m^3$, respectively). Cross-validated $R^2$ values in Seoul and Busan were 0.31 and 0.23, respectively, whereas the other five cities had $R^2$ values of zero. The national model produced a higher cross-validated $R^2$ (0.36) than those for the city-specific models. Conclusions In general, the ordinary kriging models performed poorly for the seven major cities and the entire country of South Korea, but the model performance was better in the national model. To improve model performance, future studies should examine different prediction approaches that incorporate $PM_{10}$ source characteristics.

A clinical study on the relation between facial paralysis and acupoints on the face and the upper limbs by the use of DITI diagnosis (적외선 체열진단을 이용한 안면마비와 안면과 상지에 분포한 경혈위와의 관계에 대한 임상고찰)

  • Kim, Jin-Won;Jeong, Byeong-Ju;Kim, Yong-Ho;Seo, Ho-Seok;Hwang, Gyu-Dong;Son, Ji-Hyung;Han, Seung-Hea
    • The Journal of Internal Korean Medicine
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    • v.25 no.4
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    • pp.140-146
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    • 2004
  • Objectives : this study is to see if there is a significance in thermal differences of acupoints in diagnosis and treatment period of facial paralysis and to substantiate the validity of acupuncture and moxibustion treatment for it. Methods : 1. By using DITI, thermal differences of acupoints on the face and the upper limbs of 13 Bell's palsy patients were measured around 3 days after an attack of the disease. These 13 patients, whose treatment progress was monitored up to 6 months after attack, were among the inpatients and outpatients of oriental internal medicine of National Medical Center from July 1 to August 31. 2. The patients were divided into 1month, 2-3months, 4months, 6months groups according to the occasion of improvement and thermal averages of each treatment period measured. Results : When it takes within 1 month for the condition of facial paralysis to change for the better, DITI image shows the temperature of the affected face parts and arms is higher than that of the non-affected parts. However, when it takes more than 4 months, the temperature of the affected face parts and arms on DITI image is lower than that of the non-affected parts. Conclusions : Hereby, prognosis of the disease and necessary time for the treatment can be presumed through DITI screening after an occurrence of facial paralysis. Also, condition of the disease is reflected by thermal differences of acupoints for Bell's palsy treatment that are in accordance with the theory of meridian on the face. This supports the efficacy of acupuncture and moxibustion treatment for this disease.

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Analysis of Meteorological Factors when Fine Particulate Matters Deteriorate in Urban Areas of Jeju Special Self-Governing Province (제주특별자치도 도시지역 미세먼지 악화 시 기상요소 분석)

  • Sin, Jihwan;Jo, Sangman;Park, Sookuk
    • Ecology and Resilient Infrastructure
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    • v.9 no.1
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    • pp.36-58
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    • 2022
  • In this study, the weather conditions corresponding to the increase in the environmental concentration of fine dust (PM10) and ultrafine dust (PM2.5) from 2001 to 2019 in Jeju and Seogwipo cities were analyzed. The increase in the levels of PM10 and PM2.5 was observed in the order: spring > winter > autumn > summer. In both cities, PM10 and PM2.5 levels increased more frequently during the day in spring and summer and at night in autumn and winter, with PM2.5 showing a greater increase in concentration than PM10. The air temperature and wind speed corresponding with increased levels of PM10 were higher than their respective seasonal averages in spring and winter, but lower in summer and autumn. Relative humidity was lower than the seasonal average during all seasons. The air temperature variation corresponding with increased levels of PM2.5 showed the same seasonal trend as that observed for PM10. The relative humidity was higher than the respective seasonal averages in spring and summer, and lower in winter. The wind speed was lower than the seasonal average in both the cities. When the PM10 and PM2.5 levels increased, the wind direction was from the north and the west during the day and varied according to the season at night. The rate of the increase in the PM10 concentration was the highest in both cities at the wind speed of 1.6 - 3.4 ms-1 during the day and night except during night in the summer. The highest concentration of PM2.5 was observed with the wind speed range of 1.6 - 3.4 ms-1 in Jeju, and 0.3 - 1.6 ms-1 in Seogwipo. The results of this study applied to urban and landscape planning will aid in the formulation of strategies to reduce the adverse effects of fine particular matter.

Development of Real-time Oceanographic Information System for Long Line Hanging Aquaculture Farm and Temperature Variation in the Coastal Area of the East Sea (수하식 양식장용 실시간 해양환경 관측시스템 개발 및 동해 연안의 수온변동 특성)

  • Yang, Joon-Yong;Kim, Lim-Hak;Lee, Joon-Soo;Hwang, Jae-Dong;Suh, Young-Sang;Kim, Dae-Chul
    • Journal of Environmental Science International
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    • v.19 no.11
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    • pp.1397-1405
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    • 2010
  • Mass mortalities of cultivated organisms have occurred frequently in Korean coastal waters causing enormous losses to cultivating industry. The preventive measures require continuous observation of farm environment and real-time provision of data. However, line hanging aquaculture farm are generally located far from monitoring buoys and has limitations on installation of heavy equipments. Substituting battery pack for solar panels and miniaturizing size of buoy, newly developed system can be attached to long line hanging aquaculture farm. This system could deliver measured data to users in real-time and contribute to damage mitigation and prevention from mass mortalities as well as finding their causes. The system was installed off Gijang and Yeongdeck in Korea, measuring and transmitting seawater temperature at the sea surface every 30 minutes. Short term variation of seawater temperature, less than one day, in Gijang from June to July 2009 corresponded tidal period of about 12 hours and long term variation seemed to be caused by cold water southeast coast of Korea, particularly northeast of Gijang. Seawater temperature differences between Gijang station and the other station that is about 500 m away from Gijang station were $1^{\circ}C$ on average. This fact indicates that it is need to be pay attention to use substitute data even if it is close to the station. Daily range of seawater temperature, one of crucial information to aquaculture, can be obtained from this system because temperature were measured every 30 minutes. Averages of daily range of temperature off Gijang and Yeongdeok during each observation periods were about $2.9^{\circ}C$ and $4.7^{\circ}C$ respectively. Dominant period of seawater temperature variation off Yeongdeok was one day with the lowest peak at 5 a.m. and the highest one at 5 p.m. generally, resulting from solar radiation.

The Changes of Solid, Nitrogen and Phosphorus Concentrations in Pig Slurry Stored at Various Depth of Slurry Storage Tank (돼지분뇨슬러리의 액비조내 저장깊이별 고형물 및 질소, 인의 함량분포에 관한 연구)

  • Jeong, Kwang-Hwa;Chung, Eui-Soo;Park, Chi-Ho;Kwag, Jung-Hoon;Choi, Dong-Yoon;Yoo, Yong-Hee
    • Journal of Animal Environmental Science
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    • v.12 no.3
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    • pp.161-168
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    • 2006
  • This paper describes the changes of characteristics of pig slurry according to storing depth. Most of the substances containing pollutants, such as were Management of manure and wastewater from animal confinement facilities is a critical factor for pollution control. With proper treatment processing method in both solid and liquid forms, it can be used as a fertilizer and soil conditioner. In Korea, liquid-manure handling system is very popular because its treatment and application is easy and labor saving. In the storage tank treatment, the period of fermentation process and solids-liquid separation averages six months and the supernatant liquid is being used as a fertilizer. In this study, the changes in chemical characteristics of pig slurry at varying depths of the storage tank were investigated. Results showed that the pH value of the fermented pig slurry was > 7, while the major pollutants such as BOD, SS, N and P were highest in the bottom of the tank. Therefore, the above findings proved that varying depths in the storage tank can influence the concentration of pollutants of the fermented pig slurry.

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Selecting Appropriate Seedling Age for Restoration Using Comparative Analysis of Physiological Characteristics by Age in Abies koreana Wilson

  • Seo, Han-Na;Chae, Seung-Beom;Lim, Hyo-In;Han, Sim-Hee;Lee, Kiwoong
    • Journal of Forest and Environmental Science
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    • v.37 no.4
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    • pp.315-322
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    • 2021
  • The aim of this study was to investigate the sensitivity to environmental stress, and changes in the photosynthesis capacity in Abies koreana seedlings by age and to suggest the most effective age for restoration. To identify these physiological characteristics of A. koreana, the chlorophyll fluorescence and photosynthetic capacity of 1-, 2-, 3-, 5- and 6-year-old A. koreana seedlings were observed from June 2020 to June 2021. The maximum quantum efficiency of Photosystem II (Fv/Fm), a chlorophyll fluorescence measurement parameter, was strongly positively correlated with the monthly average temperature (1-year-old seedling: r=0.8779, 2-year-old seedling: r=0.8605, 3-year-old seedling: r=0.8697, 5-year-old seedlings: r=0.8085, and 6-year-old seedlings: r=0.8316). The Fv/Fm values were the lowest in winter (November 2020-March 2021). In addition, the Fv/Fm values of 1-, 2-, and 3-year-old seedlings in winter were lower than that of 5- and 6-year-old seedlings, while the Fv/Fm values in summer were relatively higher than those in winter. Further, the Fv/Fm values of seedlings of all ages decreased in August 2020, when the monthly average temperature was the highest. In particular, 1-year-old to 3-year-old seedlings showed Fv/Fm values less than 0.8. Further, the photosynthetic capacity measured in August 2020 increased with increasing seedling age. The analysis of variance results for summer Fv/Fm values showed significant differences in age-specific averages (p<0.05), and Duncan's multiple range test showed significant differences between 5- and 6-year-old seedlings and 1-, 2-, and 3-year-old seedlings (p<0.05). These results suggested that the 5- and 6-year-old seedlings were less sensitive to environmental stress and showed better photosynthetic capacity than the 1-, 2-, and 3-year-old seedlings. Therefore, 5-year-old or older A. koreana seedlings can be used as restoration materials because they can show increased adaptability and stable growth during transplantation due to their relatively high environmental resistance and photosynthetic capacity.

Effects of Physicochemical and Environmental Factors on Spatial and Temporal Variations in Phytoplankton Pigment and its Community Composition in Jinhae Bay (진해만에서 물리화학적 환경요인이 식물플랑크톤 색소 및 군집조성의 시공간적 변화에 미치는 영향)

  • Na, Sujin;Lee, Jiyoung;Kim, Jeong Bae;Koo, Jun-Ho;Lee, Garam;Hwang, Hyunjin
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.27 no.2
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    • pp.340-354
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    • 2021
  • The aim of this study was to investigate the spatial and temporal distribution of phytoplankton biomass and community composition in Jinhae Bay on the southern coast of Korea. Phytoplankton pigment analysis was conducted using ultra performance liquid chromatography (UPLC) were conducted from April to December 2019 at seven stations. Temperature, salinity, and dissolved oxygen (DO) and inorganic nutrients (dissolved nitrogen, dissolved phosphorus, and orthosilicic acid) were measured to investigate the environmental factors associated with the structure of phytoplankton community. Phytoplankton biomass (Chl-a) was the highest in July (mean 15.4±4.3 ㎍/L) and the lowest in December (mean 3.5±0.6 ㎍/L). Fucoxanthin was the most abundant carotenoid and showed a similar variation pattern to Chl-a, peridinin, and Chl-b. Phytoplankton community composition analysis showed that diatoms were a predominant group with an average abundance of 70 % whereas chlorophytes, cryptophytes, and dinoflagellates often appeared with lower averages. Further, the dominance of diatoms was closely correlated with water temperature and N:P ratio, which might be influenced by high temperatures in the summer and nutrient loading from the land. Additionally, freshwater and nutrient input by rainfall was estimated to be the most important environmental factor. Hence, the spatial and temporal variations in the composition of phytoplankton pigments and phytoplankton community were correlated with physicochemical and environmental parameters.

The Characteristics of Bioclimatic Types According to Annual Cumulative Temperature-Humidity Index in South Korea (남한의 연 누적 온습도 지수에 따른 생리기후유형의 특성)

  • Kang, Chul-Sung
    • Journal of the Korean Geographical Society
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    • v.43 no.3
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    • pp.312-323
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    • 2008
  • The purpose of this paper is to analyze thermal sensation which is measured by human physioclimatic reactions in South Korea. Relationships between Temperature-Humidity Index(THI) and human thermal sensation scale are derived from a questionnaire, which investigates degree of volunteer's thermal sensation with respect to each biometeorological condition. Analyses of these empirical relationships make it possible to calculate thermal sensational indices and to classify bioclimatic types for individual weather stations based on long-term(1971-2000) averages of monthly temperature and humidity data. A generalized annual physioclimatic maps for each Annual Cumulative Thermal Sensation Index for the 68 stations are constructed to show men tend to feel in various areas. The Monthly thermal sensations are affected by latitude, altitude, orographic effects and systems of airmasses. The Annual Cumulative Thermal sensations are increasing towards northern areas and inland, and that the major factors are largely derived from cold stress in winter. The Annual Physioclimatic Types are grouped 8 climatic types(M, ES, M-ES, M-S, W-ES, C-ES, C-M, C-M-ES) according to climatic stress. Results of this study can be applied for evaluation of thermal environment in our daily activities, and for searching relevant sports training-sites, climatherapy etc.