• 제목/요약/키워드: NMR structure

검색결과 1,357건 처리시간 0.025초

옻나무 껍질에서 분리한 항산화물질의 성분 (Identification of Antioxidative Component from Stem Bark of Rhus verniciflua)

  • Kim, Jung-Bae
    • 한국식품영양학회지
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    • 제16권1호
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    • pp.60-65
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    • 2003
  • 옻나무(Rhus verniciflua)는 한국에서 위장병, 변비, 어혈, 구충 등에 효과가 있다고 알려져 있어 민간요법과 보양식품으로 옻닭으로 식용하고 있으나 독성(allergy, 옻 오름)이 심각하여 주의를 요하는 식품이다. 옻의 독성 제거방법을 사용하여 옻나무 껍질을 물로 추출한 후 항산화 작용을 갖는 수용성 물질을 분리하여 물리, 화학적 특성과 기기 분석을 통하여 (UV, IR, EI (HR)-MS, $^1$H-NMR, $^{13}$C-NMR, elemental analyzer) 구조 분석한 결과 gallic acid (3,4,5-hydroxylbenzoic acid) 임을 확인하였다.

In-cell nuclear magnetic resonance spectroscopy for studying intermolecular interactions

  • Sugiki, Toshihiko;Lin, Yuxi;Lee, Young-Ho
    • 한국자기공명학회논문지
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    • 제23권1호
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    • pp.33-39
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    • 2019
  • Studies on the interactions of proteins with partner molecules at the atomic resolution are essential for understanding the biological function of proteins in cells and for developing drug molecules. Solution NMR spectroscopy has shown remarkably useful capability for investigating properties on the weak to strong intermolecular interactions in both diluted and crowded solution such as cell lysates. Of note, the state-of-the-art in-cell NMR method has made it possible to obtain atomistic information on natures of intermolecular interactions between target proteins with partner molecules in living cells. In this mini-review, we comprehensively describe the several technological advances and developments in the in-cell NMR spectroscopy.

SECONDARY STRUCTURE OF THE PANHANDLE RNA OF INFLUENZA VIRUS A STUDIED BY NMR SPECTROSCOPY

  • Cheong, Hae-Kap;Park, Byong-Seok;Chaejoon Cheong
    • 한국생물물리학회:학술대회논문집
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    • 한국생물물리학회 1996년도 정기총회 및 학술발표회
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    • pp.31-31
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    • 1996
  • The double-stranded panhandle structure of the influenza virus RNA is important for the replication, transcription and packaging into the virion of the vRNA. The solution structure of a 34-nucleotide-long RNA which contains the conserved panhandle sequences has been investigated by one- and two-dimensional NMR spectroscopies. (omitted)

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2차원 고상 핵자기 공명기를 이용한 비정질 규산염의 고압구조 및 무질서도에 대하여 (On the Structure and the Extent of Disorder in Non-crystalline Silicates at High Pressure: 2 Dimensional Solid-state NMR Study)

  • 이성근
    • 한국광물학회지
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    • 제18권1호
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    • pp.45-52
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    • 2005
  • 2차원 고상 핵자기 공명기(2-dimensional solid-state NMR, 이하 2차원 고상NMR)와 관련된 기술과 이론의 발전과 더불어 획기적으로 증가한 스펙트럼의 분해능으로 기존의 일차원 NMR 로는 얻을 수 없었던, 비정질 규산염(유리질, 용융체, silicate glasses and melts)의 다양한 원자-분자 단위의 구조를 규명할 수 있다. 본 논문에서는 이러한 2차원 고상 NMR 방법론의 하나인 3QMAS NMR을 이용하여 이전까지 알려지지 않았던 고압환경에서의 비정질 지구물질의 원자/분자 구조에 대한 최근의 연구결과를 간략히 소개한다.

Structure of CT26 in the C-terminal of Amyloid Precursor Protein Studied by NMR Spectroscopy

  • Kang, Dong-Il;Baek, Dong-Ha;Shin, Song-Yub;Kim, Yang-Mee
    • Bulletin of the Korean Chemical Society
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    • 제26권8호
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    • pp.1225-1228
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    • 2005
  • C-terminal fragments of APP (APP-CTs), that contain A$\beta$ sequence, are found in neurotic plaques, neurofibrillary tangles and the cytosol of lymphoblastoid cells obtained from AD patients. CT26, Thr639-Asp664 (TVIVITLVMLKKKQYTSIHH GVVEVD) includes not only the transmembrane domain but also the cytoplasmic domain of APP. This sequence is produced from cleavage of APP by caspase and $\gamma$-secretase. In this study, the solution structure of CT26 was investigated using NMR spectroscopy and circular dichroism (CD) spectropolarimeter in various membrane-mimicking environments. According to CD spectra and the tertiary structure of CT26 determined in TFE-containing aqueous solution, CT26 has an α-helical structure from $Val^{2}\;to\;Lys^{11}$ in TFE-containing aqueous solution. However, according to CD data, CT26 adopts a $\beta$-sheet structure in the SDS micelles and DPC micelles. This result implies that CT26 may have a conformational transition between $\alpha$-helix and $\beta$-sheet structure. This study may provide an insight into the conformational basis of the pathological activity of the C-terminal fragments of APP in the model membrane.

n-Pentane & n-Hexane as Coguests of sH Hydrates in the Mixture with 2,2-Dimethylbutane and Methane

  • 이종원
    • 한국신재생에너지학회:학술대회논문집
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    • 한국신재생에너지학회 2006년도 추계학술대회
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    • pp.58-61
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    • 2006
  • n-Pentane and n-hexane, previously regarded as non-hydrate formers, are found to form structure H hydrate in mixtures with 2,2-dimethylbutane. Even though they are thought to be too large to fit into the largest cage of the structure H hydrate, powder XRD and NMR measurements show that they form gas hydrates in mixtures with other sH hydrate former. These findings are of fundamental interest and also will impact the composition and location of natural gas hydrates and their potential as global energy resource and climate change materials.

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Structure studies of Pulmonary Surfactant Protein B(SP-B(3,4)) by NMR Spectroscopy and Molecular Modeling

  • Kim, Yangmee;Dongha Baek;Kang, Joo-Hyun;Shin, Song-Yub;Hahm, Kyung-Soo
    • 한국자기공명학회논문지
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    • 제5권1호
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    • pp.37-45
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    • 2001
  • Synthetic pulmonary surfactants consisting of a mixture of phospholipids with synthetic peptides based on human surfactant-associated protein SP-B were prepared. These surfactants were analyzed f3r their secondary structures by circular dichroism (CD) spectroscopy and NMR spectroscopy. Two synthetic peptides (SP-B(3), SP-B(4)) combined with the phospholipid mixture displayed significant surfactant properties. The CD spectra showed that the u-helical propensities of the peptides in DPC micelles. In the NMR spectroscopy, the tertiary structures of SP-B(3) show that it has $\alpha$-helical structure from Gln5 to Arg13 in DPC micelle and SP-B(4) show that they have $\alpha$-helical structure from Gln5 to Leu12 in DPC micelle. Based on these structures, truncated peptides originated from SP-B protein, can be designed as effective synthetic surfactants for clinical use.

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구조-I 및 구조-H 하이드레이트의 공존 현상 규명 연구 (Studies on coexistence phenomena of structure I and H hydrates)

  • 서유택;이종원;서용원;이흔
    • 한국신재생에너지학회:학술대회논문집
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    • 한국신재생에너지학회 2007년도 추계학술대회 논문집
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    • pp.573-576
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    • 2007
  • 가스 하이드레이트의 구조-I 및 구조-H의 공존 현상을 13C NMR과 Raman spectroscopy를 이용하여 분석하였다. 하이드레이트 생성 조건이 구조-H 영역에만 있을 때는 CH4+neohexane 혼합 하이드레이트가 구조-H만을 나타냈지만, 구조-I의 영역에서는 구조-H의 혼합 하이드레이트와 구조-I의 순수 메탄 하이드레이트가 공존하는 것을 $^{13}C$ NMR spectra를 통해 확인하였다. 이러한 현상은 구조-H 생성자로 알려진 isopentane, MCP, MCH 에서도 관찰되었으며, Raman spectroscopy를 이용해서도 확인할 수 있었다.

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Backbone assignment of the anticodon binding domain of human Glycyl-tRNA synthetase

  • Mushtaq, Ameeq Ul;Cho, Hye Young;Byun, Youngjoo;Jeon, Young Ho
    • 한국자기공명학회논문지
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    • 제20권2호
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    • pp.50-55
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    • 2016
  • Backbone $^1H$, $^{13}C$ and $^{15}N$ resonance assignments are presented for the anticodon binding domain (residues 557-674) of human glycyl-tRNA synthetase (GRS). Role of the anticodon binding domain (ABD) of GRS as an anticancer ligand has recently been reported and its role in other diseases like Charcot-Marie-Tooth (CMT) and polymyositis have increased its interest. NMR assignments were completed using the isotope [$^{13}C/^{15}N$]-enriched protein and chemical shifts based secondary structure analysis with TALOS+ demonstrate similar secondary structure as reported in X-ray structure PDB 2ZT8, except some C-terminal residues. NMR signals from the N-terminal residues 557 to 571 and 590 to 614 showed very weak or no signals exhibiting dynamics or conformational exchange in NMR timescale.