• BMB Reports
• /
• v.41 no.12
• /
• pp.868-874
• /
• 2008

Neurofilaments (NFs) are neuronal intermediate filaments composed of light (NF-L), middle (NF-M), and heavy (NF-H) subunits. NF-L self-assembles into a "core" filament with which NF-M or NF-H co-assembles to form the neuronal intermediate filament. Recent reports show that point mutations of the NF-L gene result in Charcot-Marie-Tooth disease (CMT). However, the most recently described rod domain mutant of human NF-L (A148V) has not been characterized in cellular level. We cloned human NF-L and used it to engineer the A148V. In phenotypic analysis using SW13 cells, A148V mutation completely abolished filament formation despite of presence of NF-M. Moreover, A148V mutation reduced the levels of in vitro self-assembly using GST-NF-L (H/R) fusion protein whereas control (A296T) mutant did not affect the filament formation. These results suggest that alanine at position 148 is essentially required for NF-L self-assembly leading to subsequent filament formation in neuronal cells.

• YAKHAK HOEJI
• /
• v.59 no.5
• /
• pp.230-234
• /
• 2015

This paper includes a review of 555 drug-facilitated sexual assault (DFSA) cases analyzed at the National Forensic Service (NFS), South Korea, between 2006 and 2012. The results of toxicological analyses of blood and urine samples were also reported, and furthermore the results were interpreted with respect to the number of drugs detected. The number of DFSA cases was highest during warmer summer months and the mean age of the victims was 25 years, with 48% being between 20 and 29 years. Accommodations or entertainment places were the most frequent place of the sexual assault (57%); and the assailant was a stranger in 72% of the DFSA cases. Drugs were identified in the blood or urine samples in 145 cases (26%) and sedative-hypnotics, such as benzodiazepines and zolpidem, were the most commonly detected, along with sedative antihistamines such as doxylamine and diphenhydramine. The frequent presence of sedative drugs in biological samples tends to implicate their use in chemical submission. However, interpreting the analytical results in terms of voluntary vs. surreptitious administration of drugs requires further detailed investigation and knowledge of the victim's health status and medication used at the time of event.

• YAKHAK HOEJI
• /
• v.57 no.4
• /
• pp.289-292
• /
• 2013

A total of 2,080 forensic autopsies in Seoul, Incheon and Gyeonggi province were performed by the National Forensic Service (NFS) in 2010. After analysing blood samples collected at autopsies by GC-MS and LC-MS/MS, the types and prevalence of drugs and poisons in blood were investigated using our laboratory information management system. Among 2,080 cases, 1,061 cases (51%) were positive for drugs and poisons. Surprisingly, antidepressants were identified in 137 cases which comprised 13% of the positive cases. Twelve different kinds of antidepressants were determined: Amitriptyline, fluoxetine, nortriptyline, trazodone, imipramine, mirtazapine, citalopram, venlafaxin, clomipramine, paroxetine, sertraline and bupropion. Amitriptyline was the most frequently detected antidepressant and was identified in 39 cases. Moreover, amitriptyline, fluoxetine, and nortriptyline were included in the list of the 20 most commonly encountered drugs or poisons in the analysis of blood collected at autopsies from 2007 to 2009, indicating the prevalence of their use. In this study, the 137 antidepressant-related deaths were classified by the mode of death to predict the prevalence of these drugs. As a result, those deaths were divided into four groups based on the cause and mode of death: 56 cases of suicide with fatal concentrations of antidepressant drugs in blood, 6 homicidal cases directly or indirectly related to antidepressants, 59 natural deaths with antidepressants detected in blood and 16 deaths caused by fire or other accidents with antidepressants detected in blood. Because incidents involving antidepressants have been increasing, especially in suicides or homicides, it is necessary for the health authorities and law enforcement administrations to cooperate and share the statistical data for curbing the abuse of antidepressants. This report is expected to provide the reference data related with antidepressants for the investigation of the deaths.

• Anatomy & Biological Anthropology
• /
• v.31 no.4
• /
• pp.121-131
• /
• 2018

Stature is one of the unique biological properties of a person, which can be used for identification of the individual. In this regard, statures are estimated for the unknown victims from crimes and disasters. However, the accuracy of estimates may be compromised by inappropriate methodologies and/or practices of stature estimation. Discussed in this study are the methodological issues related to the current practices of forensic anthropological stature estimation in Korea, followed by suggestions to enhance the accuracy of the stature estimates. Summaries of forensic anthropological examinations for 560 skeletal remains, which were conducted at the National Forensic Service (NFS), were reviewed. Mr. Yoo Byung-eun's case is utilized as an example of the NFS's practices. To estimate Mr. Yoo's stature, Trotter's (1970) femur equation was applied even though the fibula equation of a lower standard error was available. In his case report, the standard error associated with the equation (${\pm}3.8cm$) was interpreted as an 'error range', which gave a hasty impression that the prediction interval is that narrow. Also, stature shrinkage by aging was not considered, so the estimated stature in Mr. Yoo's case report should be regarded as his maximum living stature, rather than his stature-at-death. Lastly, applying Trotter's (1970) White female equations to Korean female remains is likely to underestimate their statures. The anatomical method will enhance the accuracy of stature estimates. However, in cases that the anatomical method is not feasible, the mathematical method based on Korean samples should be considered. Since 1980's, effort has been made to generate stature estimation equations using Korean samples. Applying the equations based on Korean samples to Korean skeletal remains will enhance the accuracy of the stature estimates, which will eventually increase the likelihood of successful identification of the unknowns.

• Proceedings of the Korean Society for Agricultural Machinery Conference
• /
• 2017.04a
• /
• pp.162-162
• /
• 2017

구글에서 공개한 Tensorflow를 이용한 여러 학문 분야의 연구가 활발하다. 농업 시설환경을 대상으로 한 빅데이터의 축적이 증가함과 아울러 실효적인 정보 획득을 위한 각종 데이터 분석 및 마이닝 기법에 대한 연구 또한 활발한 상황이다. 한편, 타 분야의 성공적인 심층학습기법 응용사례에 비하여 농업 분야에서의 응용은 초기 성장 단계라 할 수 있다. 이는 농업 현장에서 취득한 정보의 난해성 및 완성도 높은 생육/환경 모델링 정보의 부재로 실효적인 전과정 처리 기술 도출에 소요되는 시간, 비용, 연구 환경이 상대적으로 부족하기 때문일 것이다. 특히, 센서 기반 데이터 취득 기술 증가에 따라 비약적으로 방대해진 수집 데이터를 시간 복잡도가 높은 심층 학습 모델링 연산에 기계적으로 단순 적용할 경우 시간 효율적인 측면에서 성공적인 결과 도출에 애로가 있을 것이다. 매우 높은 시간 복잡도를 해결하기 위하여 제시된 하드웨어 가속 기능의 경우 일부 개발환경에 국한이 되어 있다. 일례로, 구글의 Tensorflow는 오픈소스 기반 병렬 클러스터링 기술인 MPICH를 지원하는 알고리즘을 공개하지 않고 있다. 따라서, 본 연구에서는 심층학습 기법 연구에 있어서, 예상 가능한 다양한 자원을 활용하여 최대한 연산의 결과를 빨리 도출할 수 있는 하드웨어적인 접근 방법을 모색하였다. 호스트에서 수행하는 일방적인 학습 알고리즘과 달리 이기종간 심층 학습이 가능하기 위해선 우선, NFS(Network File System)를 이용하여 데이터 계층이 상호 연결이 되어야 한다. 이를 위해서 고속 네트워크를 기반으로 한 NFS의 이용이 필수적이다. 둘째로 제한된 자원의 한계를 극복하기 위한 메모 공유 라이브러리가 필요하다. 셋째로 이기종간 프로세서에 최적화된 병렬 처리용 컴파일러를 이용해야 한다. 가장 중요한 부분은 이기종간의 처리 능력에 따른 작업을 고르게 분배할 수 있는 작업 스케쥴링이 수행되어야 하며, 이는 처리하고자 하는 데이터의 형태에 따라 매우 가변적이므로 해당 데이터 도메인에 대한 엄밀한 사전 벤치마킹이 수행되어야 한다. 이러한 요구조건을 대부분 충족하는 Open-CL ver1.2(https://www.khronos.org/opencl/)를 이용하였다. 최신의 Open-CL 버전은 2.2이나 본 연구를 위하여 준비한 4가지 이기종 시스템에서 모두 공통적으로 지원하는 버전은 1.2이다. 실험적으로 선정된 4가지 이기종 시스템은 1) Windows 10 Pro, 2) Linux-Ubuntu 16.04.4 LTS-x86_64, 3) MAC OS X 10.11 4) Linux-Ubuntu 16.04.4 LTS-ARM Cortext-A15 이다. 비교 분석을 위하여 NVIDIA 사에서 제공하는 Pascal Titan X 2식을 SLI로 구성한 시스템을 준비하였다. 개별 시스템에서 별도로 컴파일 된 바이너리의 이름을 통일하고, 개별 시스템의 코어수를 동일하게 균등 배분하여 100 Hz의 데이터로 입력이 되는 온도 정보와 조도 정보를 입력으로 하고 이를 습도정보에 Linear Gradient Descent Optimizer를 이용하여 Epoch 10,000회의 학습을 수행하였다. 4종의 이기종에서 총 32개의 코어를 이용한 학습에서 17초 내외로 연산 수행을 마쳤으나, 비교 시스템에서는 11초 내외로 연산을 마치는 결과가 나왔다. 기보유 하드웨어의 적절한 활용이 가능한 심층학습 기법에 대한 연구를 지속할 것이다

• Proceedings of the Korean Society for Agricultural Machinery Conference
• /
• 2017.04a
• /
• pp.171-171
• /
• 2017

전산유체역학(CFD: Computational Fluid Dynamics)를 이용한 스마트팜 환경 내부의 정밀 제어 연구가 진행 중이다. 시계열 데이터의 난해한 동적 해석을 극복하기위해, 비선형 모델링 기법의 일종인 인공신경망을 이용하는 방안을 고려하였다. 선행 연구를 통하여 환경 데이터의 비선형 모델링을 위한 Tensorflow활용 방법이 하드웨어 가속 기능을 바탕으로 월등한 성능을 보임을 확인하였다. 그럼에도 오프라인 일괄(Offline batch)처리 방식의 한계가 있는 인공신경망 모델링 기법과 현장 보급이 불가능한 고성능 하드웨어 연산 장치에 대한 대안 마련이 필요하다고 판단되었다. CFD 해석을 위한 Solver로 SU2(http://su2.stanford.edu)를 이용하였다. 운영 체제 및 컴파일러는 1) Mac OS X Sierra 10.12.2 Apple LLVM version 8.0.0 (clang-800.0.38), 2) Windows 10 x64: Intel C++ Compiler version 16.0, update 2, 3) Linux (Ubuntu 16.04 x64): g++ 5.4.0, 4) Clustered Linux (Ubuntu 16.04 x32): MPICC 3.3.a2를 선정하였다. 4번째 개발환경인 병렬 시스템의 경우 하드웨어 가속는 OpenCL(https://www.khronos.org/opencl/) 엔진을 이용하고 저전력 ARM 프로세서의 일종인 옥타코어 Samsung Exynos5422 칩을 장착한 ODROID-XU4(Hardkernel, AnYang, Korea) SBC(Single Board Computer)를 32식 병렬 구성하였다. 분산 컴퓨팅을 위한 환경은 Gbit 로컬 네트워크 기반 NFS(Network File System)과 MPICH(http://www.mpich.org/)로 구성하였다. 공간 분해능을 계측 주기보다 작게 분할할 경우 발생하는 미지의 바운더리 정보를 정의하기 위하여 3차원 Kriging Spatial Interpolation Method를 실험적으로 적용하였다. 한편 병렬 시스템 구성이 불가능한 1,2,3번 환경의 경우 내부적으로 이미 존재하는 멀티코어를 활용하고자 OpenMP(http://www.openmp.org/) 라이브러리를 활용하였다. 64비트 병렬 8코어로 동작하는 1,2,3번 운영환경의 경우 32비트 병렬 128코어로 동작하는 환경에 비하여 근소하게 2배 내외로 연산 속도가 빨랐다. 실시간 CFD 수행을 위한 분산 컴퓨팅 기술이 프로세서의 속도 및 운영체제의 정보 분배 능력에 따라 결정된다고 판단할 수 있었다. 이를 검증하기 위하여 4번 개발환경에서 운영체제를 64비트로 개선하여 5번째 환경을 구성하여 검증하였다. 상반되는 결과로 64비트 72코어로 동작하는 분산 컴퓨팅 환경에서 단일 프로세서 기반 멀티 코어(1,2,3번) 환경보다 보다 2.5배 내외 연산속도 향상이 있었다. ARM 프로세서용 64비트 운영체제의 완성도가 낮은 시점에서 추후 성공적인 실시간 CFD 모델링을 위한 지속적인 검토가 필요하다.

• Journal of Korea Port Economic Association
• /
• v.36 no.1
• /
• pp.59-76
• /
• 2020

The purpose of this study is to analyze the factors of the main selection criteria of the contract form used to conclude the sales contracts of used ships and to assist parties in selecting the most suitable contract form for trading situations. The methods of the study are based on identifying the factors from the questionnaires using analytic hierarchy process analysis, following the selection of typical details through interviews with the S&P Broker Group and finding the solutions that match each detail. The analysis shows that ship traders prefer the Norwegian Sales Form (NSF) to NIPPONSALE for various reasons. Considering the sellers' situations, NFS is the more reasonable option for major countries, except Japan. NIPPONSALE is relatively more focused on the advantages of the buyer's conditions, including for Japan. It is important to select the appropriate clauses from these types of contract, according to the trading conditions, including the main and additional terms, in order to create a mutual agreement between the shipper and the consignee that leads to more cooperation and balances the purposes of both parties in adjusting the time for securing and disposing of the vessels.

• Pediatric Gastroenterology, Hepatology & Nutrition
• /
• v.23 no.6
• /
• pp.558-566
• /
• 2020

Purpose: Progressive familial intrahepatic cholestasis (PFIC) is a rare genetic autosomal recessive disease caused by mutations in ATP8B1, ABCB11 or ABCB4. Mutational analysis of these genes is a reliable approach to identify the disorder. Methods: We collected and analyzed relevant data related to clinical diagnosis, biological investigation, and molecular determination in nine children carrying these gene mutations, who were from unrelated families in South China. Results: Of the nine patients (five males, four females) with PFIC, one case of PFIC1, four cases of PFIC2, and four cases of PFIC3 were diagnosed. Except in patient no. 8, jaundice and severe pruritus were the major clinical signs in all forms. γ-glutamyl transpeptidase was low in patients with PFIC1/PFIC2, and remained mildly elevated in patients with PFIC3. We identified 15 different mutations, including nine novel mutations (p.R470HfsX8, p.Q794X and p.I1170T of ABCB11 gene mutations, p.G319R, p.A1047P, p.G1074R, p.T830NfsX11, p.A1047PfsX8 and p.N1048TfsX of ABCB4 gene mutations) and six known mutations (p.G446R and p.F529del of ATP8B1 gene mutations, p.A588V, p.G1004D and p.R1057X of ABCB11 gene mutations, p.P479L of ABCB4 gene mutations). The results showed that compared with other regions, these three types of PFIC genes had different mutational spectrum in China. Conclusion: The study expands the genotypic spectrum of PFIC. We identified nine novel mutations of PFIC and our findings could help in the diagnosis and treatment of this disease.

• Nuclear Medicine and Molecular Imaging
• /
• v.43 no.5
• /
• pp.443-450
• /
• 2009

Purpose: Conventional image reconstruction uses simplified physical models of projection. However, real physics, for example 3D reconstruction, takes too long time to process all the data in clinic and is unable in a common reconstruction machine because of the large memory for complex physical models. We suggest the realistic distributed memory model of fast-reconstruction using parallel processing on personal computers to enable large-scale technologies. Materials and Methods: The preliminary tests for the possibility on virtual manchines and various performance test on commercial super computer, Tachyon were performed. Expectation maximization algorithm with common 2D projection and realistic 3D line of response were tested. Since the process time was getting slower (max 6 times) after a certain iteration, optimization for compiler was performed to maximize the efficiency of parallelization. Results: Parallel processing of a program on multiple computers was available on Linux with MPICH and NFS. We verified that differences between parallel processed image and single processed image at the same iterations were under the significant digits of floating point number, about 6 bit. Double processors showed good efficiency (1.96 times) of parallel computing. Delay phenomenon was solved by vectorization method using SSE. Conclusion: Through the study, realistic parallel computing system in clinic was established to be able to reconstruct by plenty of memory using the realistic physical models which was impossible to simplify.

• Journal of KIISE:Computing Practices and Letters
• /
• v.9 no.6
• /
• pp.635-645
• /
• 2003

One of very important features that are necessarily supported by clustered parallel computer systems is a single I/O system image in which users can access both the local and remote I/O resources transparently. In this paper, we propose an efficient disk sharing technique supporting a single disk I/O system image architecture. The design separates the I/O subsystem of a cluster into the file system and a set of virtual hard disk drivers. The virtual hard disk driver deals with a hard disk in the remote node as a local hard disk. All services provided by it are performed in the device driver level without any modification of file systems. Users can, therefore, access all the disks in the cluster regardless of their locations. Our virtual hard disk driver is implemented under the linux, and also tested in a linux cluster system. We find by experiments that it can successfully support a single disk I/O space, and at the same time it shows better performance than NFS. We are sure that this paper can be a guideline for single I/O space of other devices to be easily constructed.