• Title/Summary/Keyword: MsrB

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Detection of Inducible Clindamycin Resistance Genes (ermA, ermB, and ermC) in Staphylococcus aureus and Staphylococcus epidermidis

  • Mazloumi, Mohammad Javad;Akbari, Reza;Yousefi, Saber
    • Microbiology and Biotechnology Letters
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    • v.49 no.3
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    • pp.449-457
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    • 2021
  • The aim of the present study was to survey the frequency of inducible and constitutive phenotypes and inducible cross-resistant genes by regulating the methylation of 23S rRNA (ermA, ermB, and ermC) and macrolide efflux-related msrA gene in Staphylococcus aureus and S. epidermidis strains. A total of 172 bacterial isolates (identified based on standard tests), were examined in this study. Antibiotic susceptibility was determined by the disk diffusion method, and all isolates were evaluated with respect to inducible and constitutive phenotypes. The presence of ermA, ermB, ermC, and msrA genes was investigated by a PCR assay. The constitutive resistance phenotypes showed a higher distribution among the isolates. R phenotype was detected more among S. epidermidis isolates (46.25%). ermB, ermC, and msrA genes were detected more in methicillin-resistant S. aureus (MRSA) and methicillin-resistant S. epidermidis (MRSE) isolates that had R and HD phenotypes (>77% strains). The ermA gene had the lowest frequency among MRSA, MRSE, MSSA, and MSSE strains (<14% isolates). Distribution of inducible resistance genes in MRSA and MRSE strains, and possibly other species, leads to increased constitutive resistance to erythromycin, clindamycin, and other similar antibiotics. Therefore, it can be challenging to treat infections caused by these resistant strains.

A Comparison Between the Agricultural Traits of GM and Non-GM Rice in Drought Stress and Non-stress Conditions (건조 스트레스 환경과 스트레스가 없는 환경에서 GM벼와 non-GM벼의 농업 형질 비교)

  • Racheal, Nafula;Park, Jae-Ryoung;Jeon, Dong Won;Kim, Kyung-Min
    • Journal of Life Science
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    • v.30 no.5
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    • pp.411-419
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    • 2020
  • The development of GM crops has gained significant economic importance, and the number of countries cultivating commercial GM crops has continuously increased since the 1960s. Globally, the area given to cultivating GM soybean, maize, cotton, and canola alone had reached 114 million hectares by 2007. Although the economic importance of cultivating and commercializing GM crops has increased, there is still a need to assess their agricultural traits in comparison to non-GM produce. This study evaluated the agricultural traits of GM rice containing the drought-tolerant gene CaMsrB2 and standard rice to investigate any unintended effects of genetic engineering. The GM and non-GM rice were compared in terms of various agricultural traits in a drought greenhouse and an irrigated paddy field. There was no statistical difference in the field-grown crops, but there was a statistically significant difference in both tiller number and yield in the greenhouse. These results therefore suggest that GM rice lines containing the CaMsrB2 gene are superior in performance to non-GM rice in drought stress conditions and could be grown in drought-prone areas where drought intolerant rice may not be able to grow.

Resistance to Macrolide, Lincosamide and Streptogramin Antibiotics in Staphylococci Isolated in Istanbul, Turkey

  • Aktas, Zerrin;Aridogan, Aslihan;Kayacan, Cigdem Bal;Aydin, Derya
    • Journal of Microbiology
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    • v.45 no.4
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    • pp.286-290
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    • 2007
  • The purpose of this study was to investigate the prevalence and genetic mechanisms of erythromycin resistance in staphylococci. A total of 102 erythromycin resistant non-duplicate clinical isolates of staphylococci [78. coagulase negative stapylococci (CNS), 24 Staphylococcus aureus] were collected between October 2003 and August 2004 in Istanbul Faculty of Medicine in Turkey. The majority of the isolates were from blood and urine specimens. Antimicrobial susceptibilities were determined by the agar dilution procedure and the resistance phenotypes by the double disk induction test. A multiplex PCR was performed, using primers specific for erm(A), erm(B), erm(C), and msrA genes.. Among the 78 CNS isolates, 57.8% expressed the $MLS_{B}-constitutive$, 20.6% the $MLS_{B}-inducible$, and 21.6% the $MS_B$ phenotypes. By PCR, 78.2% of these isolates harbored the erm(C) gene, 8.9% erm(A), 6.4% erm(B), and 11.5% msrA genes. In S. aureus, the constitutive $MLS_B$ (58.3 %) was more common than the inducible phenotype (20.8%). erm(A) was detected in 50% and erm(C) in 62.5% of the isolates, while 37.5% contained both erm(A) and erm(C). erm(C)-associated macrolide resistance was the most prevalent in CNS, while ermC) and erm(A, C) was the most prevalent in S. aureus.

Multi-Spectral Reflectance of Warm-Season Turfgrasses as Influenced by Deficit Irrigation (난지형 잔디의 가뭄 스트레스 상태로 인한 멀티스팩트럴 반사광 연구)

  • Lee, Joon-Hee;Trenholm, Laurie. E.;Unruh, J. Bryan
    • Asian Journal of Turfgrass Science
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    • v.22 no.1
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    • pp.1-12
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    • 2008
  • Remote sensing using multispectral radiometry may be a useful tool to detect drought stress in turf. The objective of this research was to investigate the correlation between drought stress and multispectral reflectance (MSR) from the turf canopy. St. Augustinegrass (Stenotaphrum secundatum[Walt.] Kuntze.) cultivars 'Floratam' and 'Palmetto', 'SeaIsle 1' seashore paspalum Paspalum vaginatum Swartz.), 'Empire' zoysiagrass (Zoysia japonica Steud.), and 'Pensacola' bahiagrass (Paspalum notatumFlugge) were established in lysimeters in the University of Florida Envirotron greenhouse facility in Gainesville. Irrigation was applied at 100%, 80%, 60%, or 40% of evapotranspiration (ET). Weekly evaluations included: a) shoot quality, leaf rolling, leaf firing b) soil moisture, chlorophyll content index; c) photosynthesis and d) multispectral reflectance. All the measurements were correlated with MSR data. Drought stress affected the infrared spectral region more than the visible spectral region. Reflectance sensitivity to water content of leaves was higher in the infrared spectral region than in the visible spectral region. Grasses irrigated at 100% and 80% of ET had no differences in normalized difference vegetation indices (NDVI), leaf area index (LAI), and stress indices. Grasses irrigated at 60% and 40% of ET had differences in NDVI, LAI, and stress indices. All measured wavelengths except 710nm were highly correlated (P < 0.0001) with turf visual quality, leaf firing, leaf rolling, soil moisture, chlorophyll content index, and photosynthesis. MSR could detect drought stress from the turf canopy.

Finite Element Analysis and Measurement on the Release of Residual Stress and Non-linear Behavior in Weldment by Mechanical Loading(I) -Finite Element Analysis-

  • Jang, K.B.;Kim, J.H.;Cho, S.M.
    • International Journal of Korean Welding Society
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    • v.2 no.1
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    • pp.29-32
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    • 2002
  • In previous study, the decrease and recovery of total stiffness in welded structure was discussed on the basis of experimental examination through tensile loading and unloading test of welded specimen. The recovery of structure stiffness was caused by the release of welding residual stress through mechanical loading. In this study, analysis model that is indispensable for the effective application of MSR method was established on the basis of test and measurement result. Thermal elasto-plastic analysis for welding process was performed by non- coupled analysis. Analysis results of welding process were transfer to elasto-plastic model for tensile loading & unloading by restart technique. In elasto-plastic analysis model for mechanical loading & unloading, hardening appearance of weld metal was considered by rezoning technique and tying technique was used for JIG condition of test machine.

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On the Development of Parthenogenetic Oocytes by Cytochalasin B and Production of Cloned Mice by SCNT

  • Sim, Bo-Woong;Min, Kwan-Sik
    • Journal of Embryo Transfer
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    • v.29 no.2
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    • pp.111-117
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    • 2014
  • This study was conducted to optimize the efficiency of cloning and to produce cloned mice. The majority of cloned mammals derived by nuclear transfer (NT) die during gestation and have enlarged and dysfunctional placentas. In this study, the optimized conditions were established to produce clone mice. The parthenogenetic oocytes were activated after 6 h regardless of cytochalasin B (CB) concentration. CB treatment ($2{\mu}g/ml$) was found second polar body. Lower concentration of CB was decreased the activation rate, but the second polar body was the best highly increased during 6 h incubation. The small fragments were exhibited in the $5{\mu}g/ml$ treatment of CB, but it was not found in lower concentration groups (> $2.5{\mu}g/ml$). To examine effects of $SrCl_2$ on the adult cumulus cells, somatic cell NT oocytes were exposed during 0.5, 1 and 6 hrs. The second polar body was significantly greater in 0.5 h exposure group (6.6%) than 1, 6 hrs. Developmental rate from 2-cell to 4-cell was the lowest in 7.5 mM Strontium chloride ($SrCl_2$) groups (84.1% and 64.3%) than 5, 10 m $MSrCl_2$. The implantation rate was not significantly difference among 5, 7.5 and 10 m $MSrCl_2$ group. Three live fetuses were produced by SCNT. SCNT placentas were remarkably heavier than IVF group (8 fetuses) (0.34, 0.34, 0.33 vs 0.14 g) compared with the placenta weight of IVF and SCNT clones.

Acute toxicity evaluation of drought-tolerant transgenic rice Agb0103 to Daphnia magna

  • Oh, Sung-Dug;Lee, Bum Kyu;Park, Soo-Yun;Yun, Doh-Won;Sohn, Soo-In;Chang, Ancheol;Suh, Sang Jae
    • Korean Journal of Agricultural Science
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    • v.43 no.2
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    • pp.205-214
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    • 2016
  • A drought-tolerant transgenic rice (Agb0103) was developed using a pepper methionine sulfoxide reductase (CaMsrB2) under the control of rice Rab21 promoter with a selection marker, the phosphinothricin acetyltransferase (PAT) gene. Commercialization of genetically modified (GM) crops will require the evaluation of risks associated with the release of GM crops. With the potential problems associated to GM crops safety testing, the investigation of their effects on non-target organisms is necessary for environmental risk research. This study was carried out to assess acute toxicity of a GM crop using the water flea (Daphnia magna) for non-target organism risk evaluation. The effect of acute toxicity on Daphnia magna of Agb0103 rice and a non-GM rice, Ilmibyeo, were investigated at different concentrations (0, 625, 1,250, 2,500, 5,000, and 10,000 mg/L). The Agb0103 rice used for the test was confirmed to express the CaMsrB2/PAT gene by the PCR and ELISA. Daphnia magna feeding tests showed no significant differences in cumulative immobility or abnormal response with either Agb0103 rice or non-GM rice. The 48hr-EC50 values showed no difference between Agb0103 rice (2243 mg/L) and non-GM rice (2694 mg/L). These results suggest that there is no significant difference in toxicity to Daphnia magna between Agb0103 rice and its non-GM counterpart.

A Study on Effectiveness of Designed Composite Filter with Noise Reduction in Ultrasound Image for Diffuse Liver Disease (미만성 간질환의 초음파 영상에서 노이즈 감소를 위한 복합필터의 설계 및 유용성에 관한 연구)

  • Lee, Jin-Soo;Kim, Changsoo;Im, In-Chul;Yang, Sung-Hee
    • Journal of the Korean Society of Radiology
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    • v.11 no.2
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    • pp.69-77
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    • 2017
  • This paper proposes a composite filter for noise reduction of image. To improve the image quality by reducing the noise in the liver ultrasound image, we tried to help the accurate image analysis. In the experiment, the top seven composite filters were selected by combining the Gaussian blur filter, the sharpening filter, and the median filter using the ATS-539 ultrasonic phantom, and applied to the ultrasound image in which this was done. As a result, it was found that the values of SNR, CNR and MSR all increased when the top seven composite filters were applied. In addition, PSNR of more than 30 dB, close to SSIM 1 showed that the image loss rate is small. Therefore, the appropriate application of the proposed composite filter in this research will be useful for accurate video reading and analysis.

Synthesis of TiN/TiB2/Ti-silicides Nanocomposite Powders by Mechanochemical Reaction and its Reaction Mechanism (기계화학반응에 의한 TiN/TiB2/Ti-silicides 나노복합분말의 합성과 반응기구)

  • Cho Young-Whan;Kim Ji-Woo;Shim Jae-Hyeok;Ahn Jae-Pyoung;Oh Kyu-Hwan
    • Journal of Powder Materials
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    • v.12 no.4 s.51
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    • pp.273-278
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    • 2005
  • Nanostructured TiN/$TiB_2$/$TiSi_2$ and TiN/$TiB_2$/$Ti_5Si_2$ composite powders have been prepared by mechanochemical reaction from mixtures of Ti, BN, and $Si_3N_4$ powders. The raw materials have reacted to form a uniform mixture of TiN, $TiB_2$ and $TiSi_2$ or $Ti_5Si_3$ depending on the amount of $Si_3N_4$ used in the starting mixtures, and the reaction proceeded through so-called mechanically activated self-sustaining reaction (MSR). Fine TiN and $TiB_2$ crystallites less than a few tens of nanometer were homogeneously dispersed in the amorphous $TiSi_2$ or $Ti_5Si_3$ matrix after milling for 12 hours. These amorphous matrices became crystalline phases after annealing at high temperatures as expected, but the original microstructure did not change significantly.