• Title/Summary/Keyword: Morphological Traits

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Investigation on sink/source related traits and their relation of watermelon germplasm to promote use

  • Hwang, Hyun-Chul;Yi, Jung-Yoon;Rhee, Ju-Hee;Hur, On-Sook;Ro, Na-Young;Sung, Jung-Sook;Lee, Ho-Sun;Lee, Jae-Eun;Lee, Sok-Young
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.10a
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    • pp.75-75
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    • 2018
  • Watermelons, Citrullus species(Cucurbitaceae), are native to Africa and have been cultivated since ancient times. T he fruit flesh of wild watermelon is watery, but typically hard-textured, pale-colored and bland or bitter. The familiar sweet dessert watermelons, C. lanatus, featuring non-bitter, tender, well colored flesh, have a narrow genetic base, suggesting that they are originated from a series of selection events in a single ancestral population. In this study, considered as sweet dissert watermelon, genetic resources, C. lanatus, comprising of traditional cultivars and local accessions were collected from 18 different countries in four continents. A total of 60 accessions were characterized morphologically according to RDA genebank descriptors combined with Japan and China, list for 11 qualitative characteristics, leaf length, leaf width, petiole length, petiole diameter-source, stalk end length, stalk diameter, fruit length, fruit diameter, rind thickness, flesh sugar content($^{\circ}brix$), fruit weight-sink, and 6 sink related characters, leaf margin incision-source, fruit shape, fruit skin ground color, fruit skin stain color, fruit skin stain pattern and flesh color-sink, were also investigated. Even though the relatedness between some morphological traits and fruit weight or fruit sweetness showed no significance, the accessions investigated have a great deal of variation for most of the morphological traits. Additionally, the accessions which showed good performance in flesh color and fruit shape (IT271048) and high sugar content of flesh (IT274119, IT290118) above 14brix, were investigated in this experiment. The accessions, which have the information on specific traits including the selected accessions could be introduced, distributed and investigated for further use.

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Gene expression and SNP identification related to leaf angle traits using a genome-wide association study in rice (Oryza sativa L.) (GWAS 분석을 이용한 벼 지엽각 관련 SNP 동정 및 발현 분석)

  • Kim, Me-Sun;Yu, Yeisoo;Kang, Kwon-Kyoo;Cho, Yong-Gu
    • Journal of Plant Biotechnology
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    • v.45 no.1
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    • pp.17-29
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    • 2018
  • This study was conducted to investigate a morphological trait in 294 rice accessions including Korean breeding lines. We also carried out a genome-wide association study (GWAS) to detect significant single nucleotide polymorphism markers and candidate genes affecting major agronomic traits. A Manhattan plot analysis of GWAS using morphological traits showed that phenotypic and statistical significance was associated with a chromosome in each group. The significance of SNPs that were detected in this study was investigated by comparing them with those found previously studied QTL regions related to agronomic traits. As a result, SNP (S8-19815442), which is significant with regard to leaf angle, was located in the known QTL regions. To observe gene mutations related to leaf angle in a candidate gene, Os08g31950, its sequences were compared with sequences in previously selected rice varieties. In Os08g31950, a single nucleotide mutation occurred in one region. To compare relative RNA expression levels of candidate gene Os08g31950, obtained from GWAS analysis of 294 rice accessions and related to lateral leaf angle, we investigated relative levels by selecting 10 erect leaf angle varieties and 10 horizontal leaf angle varieties and examining real-time PCR. In Os08g31950, a high level of expression and various expression patterns were observed in all tissues. Also, Os08g31950 showed higher expression levels in the erect leaf angle variety group and higher expression rates in the leaf than in the root. The candidate gene detected through GWAS would be useful in developing new rice varieties with improved yield potential through future molecular breeding.

Genetic Diversity Evaluation of Thamnocalamus spathiflorus (Trin.) Munro Accessions through Morphological and Randomly Amplified Polymorphic DNA (RAPD) Markers

  • Tiwari, Chandrakant;Bakshi, Meena;Gupta, Dinesh
    • Journal of Forest and Environmental Science
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    • v.35 no.2
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    • pp.90-101
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    • 2019
  • Biodiversity refers to the total number and variation among species of flora and fauna of an area. Due to tremendous biotic especially anthropogenic pressure these natural resources are being vanishing. In present study genetic diversity among accessions of Thamnocalamus spathiflorus was evaluated. A total of 51 vegetative characters and 42 primers (10-mer) were screened. Out of 42 screened primers, 28 polymorphic primers were selected for further analysis. A total of 263 bands were recorded as polymorphic whereas 48 bands were monomorphic. The resolving power (Rp) of 28 Randomly Amplified Polymorphic DNA (RAPD) primers ranged from 4.6 (OPE08) to 17.6 (OPA11). The polymorphic information content (PIC) value ranged from 0.21 (OPAH09) to 0.44 (OPG02). The result revealed high degree of genetic relatedness (56 to 80%). Cluster analysis revealed two major clusters both for morphology as well as RAPD. Unlike morphological characterization, the accession (D5) from Bahli, Rampur, Shimla (H.P.) was clustered separately from the others in RAPD cluster analysis. Accessions with closed locality grouped together through RAPD marker system however analogy was recorded for morphological traits. The study conducted reflects the utility of RAPD technique for species identification and phylogenetic studies in bamboo for conducting bamboo breeding program.

Establishing a Core Collection of Proso Millet (Panicum miliaceum) Germplasm

  • Myung Chul Lee;Yu-Mi Choi;Myoung-Jae Shin;Hyemyeong Yoon;Kebede Taye Desta
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2020.08a
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    • pp.47-47
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    • 2020
  • The Korean National Agrobiodiversity Center holds the more than 1300 accessions of proso millet, but a large portion of accessions are landrace of Korea that has very similar traits. To comprehend the maximum genetic diversity of this crop, a core collection with minimum number of accessions will facilitate easy access to genetic material. Here we assessed the genetic diversity and population structure in a germplasm collection of 830 accessions by employing EST-SSR markers and morphological traits. A total of 107 alleles were detected with an average allele number of 4.9 per locus among the 830 accessions based on 37 EST-SSR markers. The number of alleles per locus ranged from 2 to 7. Polymorphism information content and expected heterozygosity ranged from 0.06 to 0.68 (mean = 0.21) and 0.06 to 0.73 (mean = 0.23), respectively. The germplasm collection was separated into two groups based on population structure analysis, whereas principal coordinate analysis (PCoA) could not cluster accessions according to their geographic origin. Subsequently, a preliminarily developed core collection with a total of 141 accessions (17%) was selected from the whole set of germplasm by combining allelic variations of EST-SSR markers and eight different phenotypic traits. The core collection optimally represented the whole germplasm collection and displayed a similar level of PCoA value and genetic variation from the initial collection. The results obtained here provide a primary resource for further genetic analysis and establish a reference for further development of appropriate genetic breeding strategies.

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Analysis of Morphological Characteristics Among Super Sweet Corn Inbred Lines (초당옥수수 자식계통들에 대한 형태적 특성 연구)

  • Ko, Woo Ri;Choi, Hong-Jib;Sa, Kyu Jin;Cho, Jin-Woong;Lee, Ju Kyong
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.60 no.2
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    • pp.190-196
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    • 2015
  • We evaluated the morphological characteristics in 100 super sweet corn inbred lines, which were developed to breeding super sweet corn variety at Gyeongsangbuk-do Agricultural Research and Extension Services, by examining six quantitative and two qualitative characteristics. On the result of evaluation of two qualitative traits, most of inbred lines showed yellow (91 inbred lines) at seed color (QL1) and weak (68 inbred lines) at seedling vigor (QL2). In the survey of six quantitative traits, the average value for each trait indicated as follows: days of tasseling (QN1, 41.0 to 55.0 days), days of silking (QN2, 44.0 to 59.0 days), anthesis-silking interval (QN3, 2.0 to 7.0 days), tillering (QN4, 0.0 to 2.0), plant height (QN5, 96.0 to 187.0 cm) and ear height (QN6, 30.0 to 86.0 cm). In PCAs (principal component analysis) for 8 morphological characteristics, seedling vigor (QL2) and tillering (QN4) greatly contributed in negative direction and the days of tasseling (QN1) and days of silking (QN2) greatly contributed in positive direction on the first principal component. While, ear height (QN6) and plant height (QN5) contributed in positive direction on the second principal component. Thus these morphological traits, which were greatly contributed in the first and second principal components, might be considered to be useful for discrimination in 100 super sweet corn inbred lines. In our study, the results of morphological variation and PCAs for 100 super sweet corn inbred lines will be helpful for super sweet corn breeding programs such activities as planning crosses for hybrid and line development.

Morphological characteristics, chemical and genetic diversity of kenaf (Hibiscus cannabinus L.) genotypes

  • Ryu, Jaihyunk;Kwon, Soon-Jae;Kim, Dong-Gun;Lee, Min-Kyu;Kim, Jung Min;Jo, Yeong Deuk;Kim, Sang Hoon;Jeong, Sang Wook;Kang, Kyung-Yun;Kim, Se Won;Kim, Jin-Baek;Kang, Si-Yong
    • Journal of Plant Biotechnology
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    • v.44 no.4
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    • pp.416-430
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    • 2017
  • The kenaf plant is used widely as food and in traditional folk medicine. This study evaluated the morphological characteristics, functional compounds, and genetic diversity of 32 kenaf cultivars from a worldwide collection. We found significant differences in the functional compounds of leaves from all cultivars, including differences in levels of chlorogenic acid isomer (CAI), chlorogenic acid (CA), kaempferol glucosyl rhamnoside isomer (KGRI), kaempferol rhamnosyl xyloside (KRX), kaemperitrin (KAPT) and total phenols (TPC). The highest TPC, KAPT, CA, and KRX contents were observed in the C22 cultivars. A significant correlation was observed between flowering time and DM yield, seed yield, and four phenolic compounds (KGRI, KRX, CAI, and TPC) (P < 0.01). To assess genetic diversity, we used 80 simple sequence repeats (SSR) primer sets and identified 225 polymorphic loci in the kenaf cultivars. The polymorphism information content and genetic diversity values ranged from 0.11 to 0.79 and 12 to 0.83, with average values of 0.39 and 0.43, respectively. The cluster analysis of the SSR markers showed that the kenaf genotypes could be clearly divided into three clusters based on flowering time. Correlations analysis was conducted for the 80 SSR markers; morphological, chemical and growth traits were found for 15 marker traits (corolla, vein, petal, leaf, stem color, leaf shape, and KGRI content) with significant marker-trait correlations. These results could be used for the selection of kenaf cultivars with improved yield and functional compounds.

Taxonomic identity of Crepidiastrum ×nakaii recorded on Hongdo Island (홍도고들빼기의 분류학적 실체)

  • JANG, Young-Jong;CHOI, Byoung-Hee
    • Korean Journal of Plant Taxonomy
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    • v.51 no.3
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    • pp.198-204
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    • 2021
  • The plant known as "Hong-do-go-deul-ppae-gi" on Hongdo Island, belonging to the genus Crepidiastrum, has been recorded as C. ×nakaii, a hybrid between C. denticulatum and C. platyphyllum. During a survey of the flora of Hongdo Island, we reexamined the taxonomic identity of "Hong-do-go-deul-ppae-gi". The morphological traits, geographical distribution, and internal transcribed spacer (ITS) sequences of "Hong-do-go-deul-ppae-gi" were compared to related species within the genus. A morphological examination revealed that the plant was similar to C. lanceolatum in that it has subshrub stems with caudex stout, 8 inner involucrals bracts, and 10 to 12 florets. In contrast, similarities to C. denticulatum were observed in terms of radical leaves deciduous in the flowering period, cauline leaves membranous with acute serrations, and beaked achenes. Furthermore, C. denticulatum and C. lanceolatum grew on Hongdo Island and nearby areas, but C. platyphyllum was not distributed in these areas. The results of morphological and distributional investigations revealed that the Hongdo Island plant should be regarded as C. ×muratagenii, a hybrid between C. denticulatum and C. lanceolatum, not C. ×nakaii, which is a hybrid between C. denticulatum and C. platyphyllum. However, the resolution of the ITS sequences was insufficient such that we could not separate the examined species.

Comparison of Morphological and Physiological Traits of Barley Varieties Bred Different Year (육성연대가 다른 보리 품종의 형태와 생리적 특성 및 수량성 비교)

  • 남윤일;하용웅
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.30 no.4
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    • pp.412-418
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    • 1985
  • Two fertilizer levels were treated to the nine barley varieties developed at different years to investigate the morphological and physiological traits related to grain yields. Recently developed varieties were higher in amounts of chlorophyll and nitrogen content of leaf, root activity, root weight and specipic leaf weight as compared with older varieties. Dry matter production was closely related to NAR rather than LAI in new varieties, but indicating the reverse results in older varieties. They showed higher NAR and light transmission rate in new varieties but higher LAI in older varieties. Leaves in new varieties were distributed uniformly according to its position on clum. However, leaves in older varieties arranged irregularly showing more distribution at the upper and middle positions on culm. The factors which showed high correlations with grain yield were chlorophyll content, root activity, NAR, and nitrogen content of leaf of which stepwise multiple regression with grain yield indicated that 90% of total variance was occupied by chlorophyll content, root activity and dry matter.

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