• Korean Journal of Soil Science and Fertilizer
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• v.46 no.3
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• pp.182-186
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• 2013

In this study, we examined the chemical properties and microbial community characteristics in 25 controlled horticultural soils (CHS) sampled from Gyeongnam Province by fatty acid methyl ester (FAME) method. The electrical conductivity of watermelon CHS was significantly (p < 0.05) higher than those of red pepper CHS, pumpkin CHS, and strawberry CHS. The amounts of total FAMEs, total bacteria, gram-negative bacteria, gram-positive bacteria, and fungi were significantly (p < 0.05) higher in red pepper CHS than those in strawberry CHS and pumpkin CHS. In addition, higher (p < 0.05) ratios of cy19:0 to $18:1{\omega}7c$ were detected in tomato CHS than those in watermelon CHS, pumpkin CHS, and red pepper CHS. This implied that microbial communities of tomato CHS were stressed more than other species of cultivation soils. Actinomycetes community in red pepper CHS was significantly (p < 0.05) higher than those in tomato CHS, strawberry CHS, and watermelon CHS. Differences in soil microbial community composition were highly associated with cultivated crop species which might result from the management inputs such as fertilizer, herbicide, and irrigation.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.4
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• pp.600-614
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• 2011

Classical methods which used for removal of heavy metals from contaminated water are adsorption, precipitation, coagulation, ion exchange resin, evaporation, and membrane processes. Microbial biosorption can be used for the removal of contaminated waters with pollutants such as heavy metals and dyes which are not easily biodegradable. Microbial biosorbents are inexpensive, eco friendly and more effective for the removal of toxic metals from aqueous solution. In this review, the bacterial and fungal abilities for heavy metals ions removal are emphasized. Environmental factors which affect biosorption process are also discussed. A detailed description for the most common isotherm and kinetic models are presented. This article reviews the achievements and the current status of bacterial and fungal biosorption technology for heavy metals removal and provides insights for further researches.

• Korean Journal of Soil Science and Fertilizer
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• v.49 no.6
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• pp.783-788
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• 2016

Agricultural management of paddy soil depends on the effects of soil microbial activities. The present study evaluated the soil microbial community of 25 paddy soils in Gyeongnam Province by fatty acid methyl ester (FAME). The average of microbial communities in paddy soils were 32.2% of total bacteria, 16.7% of Gram-negative bacteria, 12.9% of Gram-positive bacteria, 2.0% of actinomycetes, 14.9% of fungi, and 1.3% of arbuscular mycorrhizal fungi. The communities of total bacteria (34.9%) and Gram-negative bacteria (19.4%) in soils with $30{\sim}35g\;kg^{-1}$ of organic matter were significantly larger than those in soils with other organic matter levels. However, soils with $20{\sim}30g\;kg^{-1}$ of organic matter had significantly low ratio of cy17:0 to $16:1{\omega}7c$ and cy19:0 to $18:1{\omega}7c$ as compared with soils with $30{\sim}35g\;kg^{-1}$ of organic matter, indicating microbial stress decreased (p < 0.05). In principal component analyses of soil microbial communities, Gram-negative bacteria should be considered as a potential responsible factor for the obvious microbial community differentiation that was observed between the two different organic matter levels in paddy fields. Thus, soils containing $20{\sim}30g\;kg^{-1}$ of organic matter were responsible for strong effect on microbial biomass and stress in paddy fields.

• Korean Journal of Soil Science and Fertilizer
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• v.42 no.2
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• pp.139-143
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• 2009

We examined the vertical distribution of specific microbial groups and the patterns of microbial community structure within the soil profile using phospholipid fatty acid (PLFA). Samples were collected from the soil surface down to 15 cm in depth from paddy and upland fields located in Daegu, Korea. The two fields have been fertilized with only chemical fertilizers N, P, K for 33 years. Principal component analysis of the PLFA signatures indicated that the composition of the soil microbial communities changed significantly with the cultivation practices and soil depth, suggesting that cultivation practices of paddy and upland fields had more significant influence on soil microbial community than the soil depth did. The soil microbial communities changed more drastically with soil depth in upland field than in paddy field, with making thicker soil surface in paddy field in terms of soil microbial community. The ratios of cyclopropyl/monoenoic precursors and total saturated/total monounsaturated fatty acids increased with soil depth, suggesting that the deeper soil horizons are more carbon-limited and anaerobic than surface soil. The community analysis using PLFAs as biomarkers revealed that Gram-positive bacteria and actinomycetes tended to increase in proportional abundance with increasing soil depth, while the abundance of Gram-negative bacteria and fungi were highest at the soil surface and substantially lower in the subsurface.

• Korean Journal of Soil Science and Fertilizer
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• v.48 no.4
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• pp.262-270
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• 2015

The scientific information between microbial community and chemical properties of reclaimed tidal soil is not enough to understand the land reclamation process. This study was conducted to investigate the relation between chemical properties and microbial activities of soils from reclaimed tidal lands located at south-western coastal area (42 samples from Goheuong, Samsan, Bojun, Kunnae, Hwaong and Yeongsangang sites). Most of the reclaimed soils showed chemical characteristics as salinity soil based on EC. Only $Na^+$ in exchangeable cation was dependent on EC of reclaimed soil, whereas other cations such as $K^+$, $Ca^{2+}$, and $Mg^{2+}$ were independent on EC. The mesophilic bacteria decreased with an increase in EC of soil. Microbial population increased with soil organic content in the range of $0{\sim}10g\;kg^{-1}$ and dehydrogenase activity less than $100{\mu}g-TPF\;g^{-1}h^{-1}$. Microbial population of soils from reclaimed tidal lands was closely related to the microbial community containing hydrolytic enzyme activities of cellulase, amylase, protease, and lipase.

• Korean Journal of Soil Science and Fertilizer
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• v.43 no.6
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• pp.1012-1017
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• 2010

This study was carried out to investigate the effect of continuous cropping of pepper on soil microbial phospholipid fatty acids (PLFAs) under upland applied without any pesticides and chemical herbicides from 2000 to 2009. Microbial PLFAs were analysed from soils sampled in 2009. Soil microbial diversities showed PLFAs of monoplanting of pepper were distinct from those of monoplanting of garlic and interplanting of garlic and pepper by principle component 2 (PC2). Furthermore, soil microbial activity of monoplanting of pepper significantly decreased PLFAs representing as VAM-fungi, whereas it significantly increased in actinomycetes and saturated/monounsaturated PLFAs' ratio. The results drove continuous cropping of pepper would vary the microbial community and their specific activity. Soil microbial activities in continuous cropping system would depend on crop root systems.

• Korean Journal of Soil Science and Fertilizer
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• v.42 no.4
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• pp.257-265
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• 2009

The long-term effects of soil management history on microbial communities are still poorly understood. Our objectives were to determine the impact of long-term application of soil amendments on microbial communities in rice paddy fields. The treatments selected were control where crops were grown without any nutrient application (CON); nitrogen-phosphorus-potassium (NPK); NPK plus compost (CNPK); NPK plus lime (LNPK); and NPK plus silicate (WNPK). The long-term addition of organic and inorganic amendments significantly changed soil chemical properties. The amount of organic carbon increased in the treatments with fertilizer and amendments over that in the soil without inputs. However, we could not observe the differences of bacterial population among the treatments, but the number of aerobic bacteria increased by the addition of amendments. Isolates from the rice paddy soils before irrigation were Dactylosporangium, Ewingella, Geobacillus, Kocuria, Kurthia, Kytococcus, Lechevalieria, Micrococcus, Micromonospora, Paenibacillus, Pedobacter, Pseudomonas, Pseudoxanthomonas, Rhodococcus, Rothia, Sphingopyxis, Stenotrophomonas, and Variovorax. Dominant genera were Arthrobacter, Kocuria, Kurthia, and Bacillus in the long-term field. Microbial biomass was the highest in the compost treatment (CNPK), and was the lowest in the CON. Dehydrogenase activity in soils treated with rice compost straw was the highest and the activity showed an increasing trend according to treatment as follows: CON < WNPK < NPK = LNPK < CNPK. These results demonstrate that soil management practice, such as optimal application of fertilizer and amendment, that result in accumulations of organic carbon may increase microbial biomass and dehydrogenase activity in long-term rice paddy soils.

• Korean Journal of Soil Science and Fertilizer
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• v.36 no.3
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• pp.127-133
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• 2003

The effect of parent rocks to the soil microbial diversity were investigated in soils developed from granite, limestone and basalt parent rocks. In the soils, microbial populations were positively related to the soil chemicals, such as soil pH with ftuorescent Pseudomonas, and soil EC with actinomycetes, fungi, mesophilic Bacillus and alkaliphilic bacteria. Gram negative bacteria, spore forming Bacillus, were maintained relatively same levels of population between granite, limestone and basalt soils. Among the species of Burkholderia, Pseudomonas and Ralstonia were dominated in the granite soils, Pseudomonas, Burkholderia and Phyllobacterium in the limestone soils, and Burkholderia in the basalt soils.

• Korean Journal of Soil Science and Fertilizer
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• v.43 no.2
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• pp.194-199
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• 2010

Compost as a soil amendment is of importance in enhancing the soil chemical and microbial qualities; however, soil microbial community can vary depending on the composition, and the amount of compost applied to plant in the soil. Responses of soil microbial properties to compost applications with 0, 30, and 60 Mg $ha^{-1}$ were investigated in silt loam soils where red pepper(Capsicum annuum L.) was mainly cultivated in Yeongyang, Gyeongbuk, Korea. The analysis of phospholipid fatty acids (PLFAs) extracted from soil showed that compost amounts significantly increased PLFAs representing as bacteria, fungi, and VAM-fungi as well as the ratio of fungi/bacteria, and monounsaturated/saturated PLFAs. Increasing the amount of compost significantly increased Gram-/Gram+ PLFAs' ratio, but significantly decreased monounsaturated/saturated PLFAs' ratio. Therefore, this result shows that compost would vary to a limited extent the microbial community in red pepper field. However, increase in compost application would change the subgroup structure of microbial community only.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.1
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• pp.146-159
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• 2011

The continuous increase in the production of metals and their subsequent release into the environment has lead to increased concentration of these elements in agricultural soils. Because microbes are involved in almost every chemical transformations taking place in the soil, considerable attention has been given to assessing their responses to metal contaminants. Short-term and long-term exposures to toxic metals have been shown to reduce microbial diversity, biomass and activities in the soil. Several studies show that microbial parameters like basal respiration, metabolic quotient, and enzymatic activities, including those of oxidoreductases and those involved in the cycle of C, N, P and other elements, exhibit sensitivity to soil metal concentrations. These have been therefore, regarded as good indices for assessing the impact of metal contaminants to the soil. Metal contamination has also been extensively shown to decrease species diversity and cause shifts in microbial community structure. Biochemical and molecular techniques that are currently being employed to detect these changes are continuously challenged by several limiting factors, although showing some degree of sensitivity and efficiency. Variations and inconsistencies in the responses of bioindicators to metal stress in the soil can also be explained by differences in bioavailability of the metal to the microorganisms. This, in turn, is influenced by soil characteristics such as CEC, pH, soil particles and other factors. Therefore, aside from selecting the appropriate techniques to better understand microbial responses to metals, it is also important to understand the prevalent environmental conditions that interplay to bring about observed changes in any given soil parameter.