• Title/Summary/Keyword: Meloidogyne incognita

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Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound

  • Park, Sook-Young;Jeon, Jongbum;Kim, Jung A;Jeon, Mi Jin;Yu, Nan Hee;Kim, Seulbi;Park, Ae Ran;Kim, Jin-Cheol;Lee, Yerim;Kim, Youngmin;Choi, Eu Ddeum;Jeong, Min-Hye;Lee, Yong-Hwan;Kim, Soonok
    • Mycobiology
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    • v.49 no.3
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    • pp.294-296
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    • 2021
  • An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73 Mb, N50 of 4.60 Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified out of 13,730 gene models predicted.

Screening of Plant Extracts for Nemastatic Activity (선충 억제 활성 식물 추출물의 선발)

  • Kim, Donggeun;Ryu, Younghyun;Huh, Changseok;Ryu, Junga;Yeon, Ilkwon;Lee, Younsu
    • Research in Plant Disease
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    • v.20 no.1
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    • pp.37-49
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    • 2014
  • A total of 2,714 methanol extracts of 1,677 plant species in 178 families were screened for nemastatic activity against Rhabditis sp. by 96-well microplate bioassay. The plant extracts with a concentration of $5,000{\mu}g/ml$ were mixed with aqueous nematode solution containing about 20 Rhabditis sp. and their activity was examined daily for 7 days. Out of 2,714 plant extracts examined in this test, 2,362 (87.0%) showed no negative influence on the nematode activity, while 187 (6.9%) inhibited nematode activity about 50%, 95 (3.5%) inhibited nematode activity over 90%, and 70 (2.6%) rather enhanced nematode activity. Among those showing over 50% nemastatic activity, 25 extracts were randomly selected for further screening with Rhabditis sp. and with juveniles of Meloidogyne incognita. The screening revealed that 11 extracts (44%) were consistently nemastatic. The 282 extracts with nemastatic activity could be of use in future studies on nematicidal plants.

Potential Reasons for Prevalence of Fusarium Wilt in Oriental Melon in Korea

  • Seo, Yunhee;Kim, Young Ho
    • The Plant Pathology Journal
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    • v.33 no.3
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    • pp.249-263
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    • 2017
  • This study aims to examine the potential reasons for the current prevalence of the fusarium wilt in the oriental melon. Twenty-seven Fusarium isolates obtained from oriental melon greenhouses in 2010-2011 were identified morphologically and by analysis of elongation factor-1 alpha gene (EF-$1{\alpha}$) and internal transcribed spacer (ITS) rDNA sequences as 6 Fusarium species (8 isolates of F. oxysporum, 8 F. commune, 5 F. proliferatum, 3 F. equiseti, 2 F. delphinoides, and 1 F. andiyazi), which were classified as same into 6 EF-$1{\alpha}$ sequence-based phylogenetic clades. Pathogenicity of the Fusarium isolates on the oriental melon was highest in F. proliferatum, next in F. oxysporum and F. andiyazi, and lowest in the other Fusarium species tested, suggesting F. proliferatum and F. oxysporum were major pathogens of the oriental melon, inducing stem rots and vascular wilts, respectively. Oriental melon and watermelon were more susceptible to F. oxysporum than shintosa and cucumber; and cucumber was most, oriental melon and watermelon, medially, and shintosa was least susceptible to F. proliferatum, whose virulence varied among and within their phylogenetic subclades. Severe root-knot galls were formed on all the crops infected with Meloidogyne incognita; however, little indication of vascular wilts or stem and/or root rots was shown by the nematode infection. These results suggest the current fungal disease in the oriental melon may be rarely due to virulence changes of the fusarium wilt pathogen and the direct cause of the severe root-knot nematode infection, but may be potentially from other Fusarium pathogen infection that produces seemingly wilting caused by severe stem rotting.

Ovicidal Activity of Lactic Acid Produced by Lysobacter capsici YS1215 on Eggs of Root-Knot Nematode, Meloidogyne incognita

  • Lee, Yong Seong;Naning, Kyaw Wai;Nguyen, Xuan Hoa;Kim, Sun Bae;Moon, Jae Hak;Kim, Kil Yong
    • Journal of Microbiology and Biotechnology
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    • v.24 no.11
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    • pp.1510-1515
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    • 2014
  • Lysobacter capsici YS1215 isolated from soil previously showed nematicidal potential for biological control of the root-knot nematode. In this study, lactic acid, a nematicidal compound, was isolated from culture filtrate of YS1215, and its ovicidal activity was investigated. Purification and identification of lactic acid were performed by a series of column chromatographies and identified by $^1H$ and $^{13}C$ NMR spectra and GC-MS analysis. Our results showed that bacterial culture filtrate containing lactic acid significantly inhibited egg hatching. The lowest egg hatch rate (5.9%) was found at a high concentration ($25 {\mu}l/ml$) of lactic acid at 5 days after incubation, followed by 20 (15.2%), 15 (23.7%), 10 (29.8%), and $5(36.4%){\mu}l/ml$, while egg hatching in the control (sterile distilled water) was 44.5%. This is the first report of lactic acid as an ovicidal compound, and it may be considered as an alternative of chemical pesticide against root-knot nematodes.

Toxicity Assessment of Photorhabdus temperata Isolated from Heterorhabditis megidis Gwangju Strain (Nematoda: Heterorhabditidae) in Fish and Rat (Heterorhabditis megidis Gwangju Strain (Nematoda: Heterorhabditidae)으로부터 분리한 Photorhabdus temperata의 어류 및 쥐 독성평가)

  • Park, Sun-Han;Chung, Nam-Jun;Choo, Young-Moo;Kim, Young-Joon;Kim, Jin-Ho
    • Korean Journal of Organic Agriculture
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    • v.30 no.1
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    • pp.103-118
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    • 2022
  • Photorhabdus is a bacterial symbiont of entomopathogenic nematodes of the genus Heterorhabditis in the family Heterorhabditidae. Photorhabdus is known to have nematicidal activity in addition to insecticidal activity. P. temperata isolated from Korean indigenous H. megidis Gwangju strain also produced high control efficacy against root-knot nematode Meloidogyne incognita and root-lesion nematode Pratylenchus penetrans. P. temperata has drawn interest as a potential bionematicide for the control of root-knot nematodes thereby. For the registration as an organic agricultural material, the toxicity of P. temperata was assessed by the acute toxicity test in carp (Cyprinus carpio) and acute oral and dermal toxicity tests in Sprague-Dawley rat (Rattus norvegicus) in compliance with the guidelines of the Rural Development Administration (RDA). In the acute toxicity test in fish, neither lethality nor abnormal responses of carp were observed. Body length and weight of carp and changes in DO concentrations and pH values were not significantly different between the treated group and the untreated control. In the acute oral and dermal toxicity tests, clinical signs, abnormal behavior, mortality, and pathological findings were not observed in all the experimental rats. The weight increment of all rats was normal. Acute toxicity results of P. temperata in fish and rats belonged to categories III, IV, and IV of RDA, respectively. Toxicity results of the present study indicated that P. temperata could be a safe and promising bionematicide against root-knot nematodes and root lesion nematode.

Studies on the Patterns of Plastic Film House, Their Growing; Conditions, and Diseases and Pests Occurrence on Horticultural Crops in Southern Part of Korea. Insects and Nematodes Associated with Horticultural Crops and Effect of Nursery Soil Conditions on the Infection of Root-knot Nematode (남부지방(南部地方) 시설원예(施設園藝)의 유형(類型).재배환경(栽培環境) 및 병해충발생(病害蟲發生)에 관(關)한 연구(硏究) -충발생양상(蟲發集樣相)과 상토(床土)의 선택(選擇)에 따른 뿌리혹선충(線蟲)의 발생(發生)-)

  • Choo, Ho-Yul;Kim, Hee-Kyu;Park, Jung-Choon;Lee, Sang-Myeong;Lee, Jeong-Im
    • Korean journal of applied entomology
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    • v.26 no.4 s.73
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    • pp.195-201
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    • 1987
  • Insects and nematodes associated with crops growing in plastic film houses were surveyed throughout the southern part of Korea at Jinju, Jiphyeon, Geumsan, Hapcheon, Changyeong, Namji, Milyang, Kimhae, Busan, Sooncheon and Gwangyang from December of 1984 to December of 1985. The phytonematodes representing six families, nine genera and nine species, and the insects representing four orders, seventeen families, twenty-three genera and twenty-four species were identified. The mite also caused problem on the leaves of strawberry and watermelon. Of these Meloidogyne incognita and Aphis gossyphii were most important ones. Aphelenchoides fragariae and M. hapla, however dominant nematodes on strawberry. M. incognita was always detected from pepper plants which were heavily infected with Phytophthora capsici. Tomato roots were readily infected with root-knot nematodes in non-sterilized upland surface soil. However, tomato were growing-vigorouly free from nematode damage in the upland surface soil treated by nematicide or in the paddy soil. A few galls were developed even in the upland subsoil at 60cm below surface. Soil salinity affected profoundly the host-root-knot nematode interaction: the numerous galls were developed on the tomato roots at EC $1mS/cm^2$ followed by 4mS and 2mS, but few galls were at 6mS.

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Evaluation of Disease Resistance of Cucurbit Cultivars to Powdery Mildew and Root-Knot Nematode (박과작물 주요 품종의 흰가루병 및 뿌리혹선충병 저항성 평가)

  • Kim, Sung-Heun;Shin, Ji-Eun;Lee, Kyung-Jun;Xu, Sheng-Jun;Kim, Byung-Sup
    • Research in Plant Disease
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    • v.18 no.1
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    • pp.29-34
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    • 2012
  • Powdery mildew and root-knot nematode are very important diseases occurred in cucurbits. This study was conducted to evaluate the resistance of commercial cucurbit cultivars (21 cultivars of cucumber, 9 cultivars of watermelon, 7 cultivars of oriental melon, and 2 cultivars of melon) to powdery mildew and root-knot nematode. At 60 days after transplanting, disease severity of powdery mildew of commercial cucurbit cultivars was investigated. Two cucumber cultivars, 'Gangryeogsamcheok' and 'Sunhobaegchimdadagi' were moderately resistant but the rest of cucumber cultivars were susceptible to powdery mildew. All examined watermelon and oriental melon cultivars were susceptible to powdery mildew, while two melon cultivars ('PMR Turbo' and 'PMR Victory') were resistant. At 45 days after inoculation of seedlings, disease severity of root-knot nematode of commercial cucurbit cultivars were investigated. One cucumber cultivars, 'Baegbongdadagi' was moderately resistant and the others were susceptible to root-knot nematode. In case of watermelon, 'Dalgonakkul' was resistant and the others were moderately resistant or susceptible to root-knot nematode. All examined oriental melon and melon cultivars were susceptible to root-knot nematode. On these results, we recommend that resistant cultivars to powdery mildew and/or root-knot nematode will be more suitable in cultivation of cucurbits for organic farming.