• 제목/요약/키워드: Marker Efficiency

검색결과 212건 처리시간 0.027초

Lactobacillus plantarum과 Leuconostoc mesenteroides의 Protoplast 생성의 최적 조건 (Optimum Conditions for the Protoplast Formation of Lactobacillus plantarum and Leuconostoc mesenteroides)

  • 전억한;박범식조재선
    • KSBB Journal
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    • 제9권2호
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    • pp.191-199
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    • 1994
  • 김치 발효에 주관여 미생물로 작용하는 Lactoba-cillus plantarum, Leuconostoc mesenteroides 균주에 세포 융합법을 적용시켜 우수한 형질의 재조합체를 얻기 위한 균주 개량의 방법으로 이용하고자 하여 그 기초가 되는 원형질 형성의 최적 조건을 조사하였다. Protoplast를 생성하기 위하여 세포벽 용균 효소로 lysozyme $40{\mu}$g/ml와 protoplast 형성률이 가장 좋은 생육시기인 15hr으로 결정하였다. $30^{\circ}C$, pH 7.5에서 현저한 흡광도 감소 경향과 protoplast 형성률도 우수하였다. 15% sucrose, 20mM $MgCl_2$, 6mM $CaCl_2$에서는 흡광도 감소 경향을 보이지 않았으나 protoplast 형성률은 다른 농도에서보다 증가하는 경향을 나타냈다. Plasma expander로 알려진 gela tin을 첨가하였을 경우에는 660nm에서 유의적인 흡광도 감소 경향을 보이지 않았으며 단지 proto-plast를 형성시키는데 있어서 중요한 보조적 역할을 수행하는 것으로 여겨진다. 균주 발육을 하기 위한 최소 저지 농도를 조사한 결과 marker로 이용할 수 있는 항생제는 erythromycin($15{\mu}$g/ml), ampicillin($50{\mu}$/ml), tetracyclin($30{\mu}$g/ml), chloramphe-nicol($30{\mu}$g/ml)이었다. Leu. mesenteroides는 모든 조건에서 L.plantarum보다 용균 작용과 protoplast 형성 효율이 낮아 L. plantarum에 준하여 protoplast 생성조건을 결정하였다.

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Isolation and Identification of Prepubertal Buffalo (Bubalus bubalis) Spermatogonial Stem Cells

  • Feng, Wanyou;Chen, Shibei;Do, Dagiang;Liu, Qinyou;Deng, Yanfei;Lei, Xiaocan;Luo, Chan;Huang, Ben;Shi, Deshun
    • Asian-Australasian Journal of Animal Sciences
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    • 제29권10호
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    • pp.1407-1415
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    • 2016
  • Isolation and culture of spermatogonial stem cells (SSCs) are attractive for production of genetic modified offspring. In the present study, buffalo spermatogonial stem-like cells were isolated, cultured and expression pattern of different germ cell marker genes were determined. To recover spermatogonia, testes from age 3 to 7 months of buffalo were decapsulated, and seminiferous tubules were enzymatically dissociated. Two types of cells, immature sertoli cell and type A spermatogonia were observed in buffalo testes in this stage. Germ cell marker genes, OCT3/4 (Pou5f1), THY-1, c-kit, PGP9.5 (UCHL-1) and Dolichos biflorus agglutinin, were determined to be expressed both in mRNA and protein level by reverse transcription polymerase chain reaction and immunostaining in buffalo testes and buffalo spermatogonial stem-like cells, respectively. In the following, when the isolated buffalo buffalo spermatogonial stem-like cells were cultured in the medium supplemented 2.5% fetal bovine serum and 40 ng/mL glial cell-derived neurotrophic factor medium, SSCs proliferation efficiency and colony number were significantly improved than those of other groups (p<0.05). These findings may help in isolation and establishing long term in vitro culture system for buffalo spermatogonial stem-like cells, and accelerating the generation of genetic modified buffaloes.

3차원 재구성을 위한 마커 기반 탠저블 인터페이스 (Marker-based Tangible Interfaces for 3D Reconstruction)

  • 정경부;박종일;최병욱
    • 전자공학회논문지CI
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    • 제49권4호
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    • pp.71-81
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    • 2012
  • 다양한 사용자들이 증강 현실을 쉽게 제작하기 위하여 3차원 물체의 추적 및 인식이 가능하도록 하기 위한 물체 등록과정이 직관적이고 간단하여야 한다. 물체 등록에 활용될 수 있는 다양한 3차원 재구성 방법이 개발되었지만, 아직은 실험적인 단계에 있다. 본 논문은 증강 현실 저작 시 다양한 사용자들에게 다양한 환경에서 직관적으로 활용될 수 있도록 하기 위한 3차원 재구성 방법으로써 마커를 활용하는 마커 기반 탠저블 인터페이스를 제안한다. 본 논문에서 제안하는 인터페이스를 이용하여 사용자가 물체의 표면을 직접 접촉함으로써 물체 여러 표면의 3차원 기하학 정보를 획득한다. 이 인터페이스를 이용하여 단순히 그래픽적인 모델링을 위한 3차원 재구성을 하는 것이 아니라 물체의 특징점 정보를 제공함으로써 증강현실에 활용할 수 있도록 한다. 최종적으로 제안하는 방법을 통하여 증강 현실 응용을 보임으로써 제안하는 방법의 효용성을 확인한다.

2D 영상마커 추적 기반 시린지펌프 투약속도 실시간 감시 기술 개발 (Real-time Monitoring of the Actual Infusion Rate of Syringe Pump Using 2D Image Marker Tracking)

  • 김건호;황영준;김민재;남경원
    • 대한의용생체공학회:의공학회지
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    • 제44권1호
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    • pp.92-98
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    • 2023
  • Purpose: To propose a new infusion rate monitoring technique based on the 2D image marker tacking to improve patient safety by preventing syringe pump-related medication accidents due to decreased infusion rate control accuracy. Materials and Methods: The infusion rate of the syringe pump and drug residue in the pump-equipped syringe were monitored in real time by tracking the movement of the 2D image markers attached to the syringe pump. Results: The error rate between the set and the estimated infusion rates was 1.03, 0.66, 1.95, 0.23, and 1.05% when the infusion rate setting was 10, 20, 30, 40, and 50 mL/H, respectively. In addition, the error rate between the actual and the estimated drug residues was 1.04, 0.47, 0.60, 3.66, and 0.00% when the infusion rate setting was 10, 20, 30, 40, and 50 mL/H, respectively. Conclusion: Experimental results demonstrated that the proposed technique can increase the efficiency of the safety management system for seriously ill inpatients by decreasing a possibility of syringe pump-related medication accidents in hospitals.

Molecular Marker Development for the Rapid Differentiation of Black Rot Causing Xanthomonas campestris pv. campestris Race 7

  • Yeo-Hyeon Kim;Sopheap Mao;Nihar Sahu;Uzzal Somaddar;Hoy-Taek Kim;Masao Watanabe;Jong-In Park
    • The Plant Pathology Journal
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    • 제39권5호
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    • pp.494-503
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    • 2023
  • Xanthomonas campestris pv. campestris (Xcc) is a plant pathogen of Brassica crops that causes black rot disease throughout the world. At present, 11 physiological races of Xcc (races 1-11) have been reported. The conventional method of using differential cultivars for Xcc race detection is not accurate and it is laborious and time-consuming. Therefore, the development of specific molecular markers has been used as a substitute tool because it offers an accurate and reliable result, particularly a quick diagnosis of Xcc races. Previously, our laboratory has successfully developed race-specific molecular markers for Xcc races 1-6. In this study, specific molecular markers to identify Xcc race 7 have been developed. In the course of study, whole genome sequences of several Xcc races, X. campestris pv. incanae, X. campestris pv. raphani, and X. campestris pv. vesicatoria were aligned to identify variable regions like sequence-characterized amplified regions and insertions and deletions specific to race 7. Primer pairs were designed targeting these regions and validated against 22 samples. The polymerase chain reaction analysis revealed that three primer pairs specifically amplified the DNA fragment corresponding to race 7. The obtained finding clearly demonstrates the efficiency of the newly developed markers in accurately detecting Xcc race 7 among the other races. These results indicated that the newly developed marker can successfully and rapidly detect Xcc race 7 from other races. This study represents the first report on the successful development of specific molecular markers for Xcc race 7.

CAPS (Cleaved Amplified Polymorphic Sequence) 마커를 적용한 김 교잡육종 기술 개발 (Cross-breeding of Neopyropia spp. (Bangiales, Rhodophyta) Using CAPS (Cleaved Amplified Polymorphic Sequence) Markers)

  • 박은정
    • 한국수산과학회지
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    • 제56권1호
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    • pp.124-132
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    • 2023
  • This study aimed to cross between Korean and Japanese pure lines of Neopyropia strains to establish cross breeding technology and identify a superior variety that harbors the strength of both parents. Four crossing combinations were tried using three methods, resulting in 1,476 single conchocelis colonies. The three co-dominant Cleaved Amplified Polymorphic Sequence (CAPS) markers (EF-1α/Mse I, TOP2/Mse I, car A/ApaL I) were used to distinguish heterozygotic sporophytes and their maternal lines obtained from the inter and intraspecific cross-fertilization within the wild type of Neopyropia strains. Of the 1,476 colonies, 26.9% (218) were heterozygotes obtained from the nuclear CAPS markers. Their maternal line was clearly confirmed using organelle CAPS marker and chimeric thallus was obtained from crossing experiment of Japanese N. yezoensis (♀) and Korean N. yezoensis (♂). The use of CAPS markers improved the efficiency of crossbreeding by quickly screening heterozygotes and maternal lines in the conchocelis phase, which otherwise required pigmentation mutants as genetic markers.

인간 골수유래-중간엽 줄기세포(hBM-MSCs)에서 PDE4 억제조절을 통한 신경세포 분화 효율 개선 (Improvement of Neuronal Differentiation by PDE4 Inhibition in Human Bone Marrow-mesenchymal Stem Cells)

  • 정다희;조이슬;조광원
    • 생명과학회지
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    • 제26권12호
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    • pp.1355-1359
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    • 2016
  • 인간 중간엽 줄기세포(hMSCs)는 신경세포(neuron-like cells)를 포함한 다양한 세포로 분화할 수 있는 능력을 지닌 성체 줄기세포(adult stem cells)이다. 본 연구에서는 인간의 골수유래-중간엽 줄기세포(bone marrow-mesenchymal stem cells; hBM-MSCs)를 이용한 신경분화에서 신경세포 표지자(neuronal marker)인 NF-M, Tuj-1 뿐만 아니라 성상세포 표지자(glial marker)인 GFAP의 발현 역시 의미 있게 증가함을 real-time PCR, Western blot, and immunocytochemical staining법을 통하여 관찰하였다. 이를 개선하기 위하여, 신경분화에 중요한 신호전달자(signal intermediator)인 PDE4를 억제한 후 신경분화를 유도하였다. PDE4 억제자인 rolipram 혹은 resveratrol를 각각 처리하여 신경분화한 줄기세포(Roli- or RSV-dMSCs)에서 NF-M, Tuj-1의 발현이 증가하였고 반면, GFAP의 발현은 감소함을 real-time PCR, Western blot, and immunocytochemical staining법을 통하여 관찰하였다. 본 연구를 통하여, PDE4를 조절하며 줄기세포의 신경분화를 개선할 수 있음을 보였다.

RNA-Seq explores the functional role of the fibroblast growth factor 10 gene in bovine adipocytes differentiation

  • Nurgulsim Kaster;Rajwali Khan;Ijaz Ahmad;Kazhgaliyev Nurlybay Zhigerbayevich;Imbay Seisembay;Akhmetbekov Nurbolat;Shaikenova Kymbat Hamitovna;Omarova Karlygash Mirambekovna;Makhanbetova Aizhan Bekbolatovna;Tlegen Garipovich Amangaliyev;Ateikhan Bolatbek;Titanov Zhanat Yeginbaevich;Shakoor Ahmad;Zan Linsen;Begenova Ainagul Baibolsynovna
    • Animal Bioscience
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    • 제37권5호
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    • pp.929-943
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    • 2024
  • Objective: The present study was executed to explore the molecular mechanism of fibroblast growth factor 10 (FGF10) gene in bovine adipogenesis. Methods: The bovine FGF10 gene was overexpressed through Ad-FGF10 or inhibited through siFGF10 and their negative control (NC) in bovine adipocytes, and the multiplicity of infection, transfection efficiency, interference efficiency were evaluated through quantitative real-time polymerase chain reaction, western blotting and fluorescence microscopy. The lipid droplets, triglycerides (TG) content and the expression levels of adipogenic marker genes were measured during preadipocytes differentiation. The differentially expressed genes were explored through deep RNA sequencing. Results: The highest mRNA level was found in omasum, subcutaneous fat, and intramuscular fat. Moreover, the highest mRNA level was found in adipocytes at day 4 of differentiation. The results of red-oil o staining showed that overexpression (Ad-FGF10) of the FGF10 gene significantly (p<0.05) reduced the lipid droplets and TG content, and their down-regulation (siFGF10) increased the measurement of lipid droplets and TG in differentiated bovine adipocytes. Furthermore, the overexpression of the FGF10 gene down regulated the mRNA levels of adipogenic marker genes such as CCAAT enhancer binding protein alpha (C/EBPα), fatty acid binding protein (FABP4), peroxisome proliferator-activated receptor-γ (PPARγ), lipoprotein lipase (LPL), and Fas cell surface death receptor (FAS), similarly, down-regulation of the FGF10 gene enriched the mRNA levels of C/EBPα, PPARγ, FABP4, and LPL genes (p<0.01). Additionally, the protein levels of PPARγ and FABP4 were reduced (p<0.05) in adipocytes infected with Ad-FGF10 gene and enriched in adipocytes transfected with siFGF10. Moreover, a total of 1,774 differentially expressed genes (DEGs) including 157 up regulated and 1,617 down regulated genes were explored in adipocytes infected with Ad-FGF10 or Ad-NC through deep RNA-sequencing. The top Kyoto encyclopedia of genes and genomes pathways regulated through DEGs were the PPAR signaling pathway, cell cycle, base excision repair, DNA replication, apoptosis, and regulation of lipolysis in adipocytes. Conclusion: Therefore, we can conclude that the FGF10 gene is a negative regulator of bovine adipogenesis and could be used as a candidate gene in marker-assisted selection.

Improved plastid transformation efficiency in Scoparia dulcis L.

  • Kota, Srinivas;Hao, Qiang;Narra, Muralikrishna;Anumula, Vaishnavi;Rao, A.V;Hu, Zanmin;Abbagani, Sadanandam
    • Journal of Plant Biotechnology
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    • 제46권4호
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    • pp.323-330
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    • 2019
  • The high expression level of industrial and metabolically important proteins in plants can be achieved by plastid transformation. The CaIA vector, a Capsicum-specific vector harboring aadA (spectinomycin resistance), is a selectable marker controlled by the PsbA promoter, and the terminator is flanked by the trnA and trnI regions of the inverted repeat (IR) region of the plastid. The CaIA vector can introduce foreign genes into the IR region of the plastid genome. The biolistic method was used for chloroplast transformation in Scoparia dulcis with leaf explants followed by antibiotic selection on regeneration medium. Transplastomes were successfully screened, and the transformation efficiency of 3 transgenic lines from 25 bombarded leaf explants was determined. Transplastomic lines were evaluated by PCR and Southern blotting for the confirmation of aadA insertion and its integration into the chloroplast genome. Seeds collected from transplastomes were analyzed on spectinomycin medium with wild types to determine genetic stability. The increased chloroplast transformation efficiency (3 transplastomic lines from 25 bombarded explants) would be useful for expressing therapeutically and industrially important genes in Scoparia dulcis L.

Associations between Feed Efficiency, Body Growth and Serum Insulin-like Growth Factor-I Level for Korean Native Ogol Chickens

  • Kim, W.K.;Kim, M.H.;Seo, D.S.;Lee, C.Y.;Suk, Y.O.;Ko, Y.
    • Asian-Australasian Journal of Animal Sciences
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    • 제18권4호
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    • pp.532-537
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    • 2005
  • Increasing of body weight has been one of the important economic factors in the poultry industry. Insulin-like growth factor (IGF)-I is a polypeptide that serves to regulate muscle development and body growth. Moreover, IGF-I is related to feed efficiency. However, there are few studies regarding the regulatory roles of chicken IGF-I/-II compared with that of mammals. Especially, the Korean Native Ogol Chicken (KNOC) has a lean body growth and its body weight is generally lighter than the broiler chicken. Therefore, this study was conducted to investigate associations among serum IGF-I/-II concentration, feed efficiency, and body growth in KNOC. The body weight and feed intake of KNOC were recorded from 20 to 36 weeks at 2 weeks intervals, and blood was taken every 2 weeks. Serum IGF-I/-II were measured by RIA. Chickens were divided into two groups, high and low serum IGF-I concentration. Generally, feed efficiency and growth performance (body weight and weight gain) in the high serum IGF-I group were higher than those of the low group during the experimental period. In particular, the body weight of the IGF-I high group were significantly different from those of the IGF-I low group at 34 and 36 weeks, respectively (p<0.05). Moreover, body weight, weight gain, and feed efficiency had a significant correlation with serum IGF-I at several weeks (p<0.05 and p<0.01). These results show that IGF-I plays an important role in body growth and suggests a possibility that serum IGF-I could be used as a selection marker for body growth in KNOC.