• Title/Summary/Keyword: MR Image

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Deep Learning in MR Image Processing

  • Lee, Doohee;Lee, Jingu;Ko, Jingyu;Yoon, Jaeyeon;Ryu, Kanghyun;Nam, Yoonho
    • Investigative Magnetic Resonance Imaging
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    • v.23 no.2
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    • pp.81-99
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    • 2019
  • Recently, deep learning methods have shown great potential in various tasks that involve handling large amounts of digital data. In the field of MR imaging research, deep learning methods are also rapidly being applied in a wide range of areas to complement or replace traditional model-based methods. Deep learning methods have shown remarkable improvements in several MR image processing areas such as image reconstruction, image quality improvement, parameter mapping, image contrast conversion, and image segmentation. With the current rapid development of deep learning technologies, the importance of the role of deep learning in MR imaging research appears to be growing. In this article, we introduce the basic concepts of deep learning and review recent studies on various MR image processing applications.

The evaluation of usefulness of the newly manufactured immobilization device (치료보조기구의 제작 및 유용성 평가)

  • Seo Seok Jin;Kim Chan Yoeng;Lee Je Hee;Park Heung Deuk
    • The Journal of Korean Society for Radiation Therapy
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    • v.17 no.1
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    • pp.45-55
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    • 2005
  • Purpose : To evaluate the usefulness of the handmade patient immobilization device and to report the clinical results of it. Materials and methods : We made two fusion images and analyzed those images. One image is made with diagnostic MR image and CT image, the other with therapeutic planning MR image and CT image. With open head holder, we measured the skin dose and attenuation dose. Also, we made the planning CT couch plate with acrylic plate and styrofoam and compared artifact. Results : We could get more accurate fusion image when we use MR head holder(within 2mm error). The skin dose was reduced 2 times and the attenuation dose was reduced more than $20\%$ when open head holder used. The planning CT couch plate was more convenient than conventional board and reduced artifact remarkably. Conclusion : We could verify the localization point in the MR image which is taken with MR head holder. So we could fuse the image more accurately. The same method could be applied to PET and US image, if the alike immobilization device used. With open head holder, the skin dose and the attenuation dose was reduced. And those above devices could substitute for expensive foreign device, if those are manufactured adequately.

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Representation Techniques for 4-Dimensional MR Images

  • Homma, Kazuhiro;Takenaka, Kenji;Nakai, Yoshihiko;Hirose, Takeshi
    • Proceedings of the Korean Society of Medical Physics Conference
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    • 2002.09a
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    • pp.429-431
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    • 2002
  • Metabolic analysis of biological tissues, the interventional radiology in MRT (Magnetic Resonance Treatment) and for clinical diagnoses, representation of 4-Dimensional (4D) structural information (x,y,z,t) of biological tissues is required. This paper discusses image representation techniques for those 4D MR Images. We have proposed an image reconstruction method for ultra-fast 3D MRI. It is based on image interpolation and prediction of un-acquired pictorial data in both of the real and the k-space (the acquisition domain in MRI). A 4D MR image is reconstructed from only two 3D MR images and acquired a few echo signals that are optimized by prediction of the tissue motion. This prediction can be done by the phase of acquired echo signal is proportioned to the tissue motion. On the other hand, reconstructed 4D MR images are represented as a 3D-movie by using computer graphics techniques. Rendered tissue surfaces and/or ROIs are displayed on a CRT monitor. It is represented in an arbitrary plane and/or rendered surface with their motion. As examples of the proposed representation techniques, the finger and the lung motion of healthy volunteers are demonstrated.

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An Efficient Segmentation-based Wavelet Compression Method for MR Image (MR 영상을 위한 효율적인 영역분할기반 웨이블렛 압축기법)

  • 문남수;이승준;송준석;김종효;이충웅
    • Journal of Biomedical Engineering Research
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    • v.18 no.4
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    • pp.339-348
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    • 1997
  • In this paper, we propose a coding method to improve compression efficiency for MR image. This can be achieved by combining coding scheme and segmentation scheme which removes noisy background region, which is meaningless for diagnosis in the MR image. In segmentation algoritm, we use full-resolution wavelet transform to extract features of regions in image and Kohonen self-organizing map to classify the features. The subsequent wavelet coder encodes only diagnostically significant foreground regions refering to segmentation map. Our proposed algorithm provides about 15% of bit rate reduction when compared with the same coder which is not combined with segmentation scheme. And the proposed scheme shows better reconstructed image quality than JPEG at the same compression ratio.

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Feasibility study of improved median filtering in PET/MR fusion images with parallel imaging using generalized autocalibrating partially parallel acquisition

  • Chanrok Park;Jae-Young Kim;Chang-Hyeon An;Youngjin Lee
    • Nuclear Engineering and Technology
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    • v.55 no.1
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    • pp.222-228
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    • 2023
  • This study aimed to analyze the applicability of the improved median filter in positron emission tomography (PET)/magnetic resonance (MR) fusion images based on parallel imaging using generalized autocalibrating partially parallel acquisition (GRAPPA). In this study, a PET/MR fusion imaging system based on a 3.0T magnetic field and 18F radioisotope were used. An improved median filter that can set a mask of the median value more efficiently than before was modeled and applied to the acquired image. As quantitative evaluation parameters of the noise level, the contrast to noise ratio (CNR) and coefficient of variation (COV) were calculated. Additionally, no-reference-based evaluation parameters were used to analyze the overall image quality. We confirmed that the CNR and COV values of the PET/MR fusion images to which the improved median filter was applied improved by approximately 3.32 and 2.19 times on average, respectively, compared to the noisy image. In addition, the no-reference-based evaluation results showed a similar trend for the noise-level results. In conclusion, we demonstrated that it can be supplemented by using an improved median filter, which suggests the problem of image quality degradation of PET/MR fusion images that shortens scan time using GRAPPA.

3D Non-Rigid Registration for Abdominal PET-CT and MR Images Using Mutual Information and Independent Component Analysis

  • Lee, Hakjae;Chun, Jaehee;Lee, Kisung;Kim, Kyeong Min
    • IEIE Transactions on Smart Processing and Computing
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    • v.4 no.5
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    • pp.311-317
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    • 2015
  • The aim of this study is to develop a 3D registration algorithm for positron emission tomography/computed tomography (PET/CT) and magnetic resonance (MR) images acquired from independent PET/CT and MR imaging systems. Combined PET/CT images provide anatomic and functional information, and MR images have high resolution for soft tissue. With the registration technique, the strengths of each modality image can be combined to achieve higher performance in diagnosis and radiotherapy planning. The proposed method consists of two stages: normalized mutual information (NMI)-based global matching and independent component analysis (ICA)-based refinement. In global matching, the field of view of the CT and MR images are adjusted to the same size in the preprocessing step. Then, the target image is geometrically transformed, and the similarities between the two images are measured with NMI. The optimization step updates the transformation parameters to efficiently find the best matched parameter set. In the refinement stage, ICA planes from the windowed image slices are extracted and the similarity between the images is measured to determine the transformation parameters of the control points. B-spline. based freeform deformation is performed for the geometric transformation. The results show good agreement between PET/CT and MR images.

Brain Magnetic Resonance Image Segmentation Using Adaptive Region Clustering and Fuzzy Rules (적응 영역 군집화 기법과 퍼지 규칙을 이용한 자기공명 뇌 영상의 분할)

  • 김성환;이배호
    • Proceedings of the IEEK Conference
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    • 1999.11a
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    • pp.525-528
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    • 1999
  • Abstract - In this paper, a segmentation method for brain Magnetic Resonance(MR) image using region clustering technique with statistical distribution of gradient image and fuzzy rules is described. The brain MRI consists of gray matter and white matter, cerebrospinal fluid. But due to noise, overlap, vagueness, and various parameters, segmentation of MR image is a very difficult task. We use gradient information rather than intensity directly from the MR images and find appropriate thresholds for region classification using gradient approximation, rayleigh distribution function, region clustering, and merging techniques. And then, we propose the adaptive fuzzy rules in order to extract anatomical structures and diseases from brain MR image data. The experimental results shows that the proposed segmentation algorithm given better performance than traditional segmentation techniques.

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Comparison of PET/MR image quality with and without point spread function algorithm according to reconstruction type (재구성 방법(점 확산함수 적용 유무)에 따른 PET/MR 영상 평가)

  • Park, Chan Rok;Moon, Il Sang;Noh, Gyeong Woon
    • The Korean Journal of Nuclear Medicine Technology
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    • v.22 no.1
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    • pp.43-45
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    • 2018
  • Purpose In this study, we evaluated image by applying with and without point spread function algorithm(PSF) according to reconstruction type. Materials and Methods Biograph mMR (Siemens, Germany) was used as PET/MR scanner. For phantom study, we used NEMA IEC Body phantom maintaining radioactivity ratio (hotsphere:background = 8:1). To evaluate phantom image quality, percent contrast recovery and signal to noise ratio (SNR) were used by drawing ROI to 4 spheres. In clinical study, the 20 patients who underwent simultaneous PET/MR was selected and set the ROI at liver. we evaluated images as SNR. Results In the phantom results, The percent contrast recovery applying PSF algoritm was high 5 % compared to without PSF algoritm and SNR was also high 11 %. In the clinical study result, we confirmed that The SNR applying PSF algoritm was high 5 % compared to without PSF algoritm. Conclusion We need to simulate a lot of phantom study and clinical analysis to improve image quality for PET/MRI.

Segmentation-based Wavelet Coding Method for MR Image (MR 영상의 영역분할기반 웨이블렛 부호화방법)

  • Moon, N.S.;Lee, S.J.;Song, J.S.;Kim, J.H.;Lee, C.W.
    • Proceedings of the KOSOMBE Conference
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    • v.1997 no.05
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    • pp.95-100
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    • 1997
  • In this paper, we propose a coding method to improve compression efficiency for MR image. This can be achieved by combining coding and segmentation scheme which removes noisy background region, which is meaningless for diagnosis, in MR image. The wavelet coder encodes only diagnostically significant foreground regions refering to segmentation map. Our proposed algorithm provides about 15% of bitrate reduction when compared with the same coder which is not combined with segmentation scheme. And the proposed scheme shows better reconstructed image Qualify than JPEG at the same compression ratio.

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Efficiency of Median Modified Wiener Filter Algorithm for Noise Reduction in PET/MR Images: A Phantom Study (PET/MR 영상에서의 팬텀을 활용한 노이즈 감소를 위한 변형된 중간값 위너필터의 적용 효율성 연구)

  • Cho, Young Hyun;Lee, Se Jeong;Lee, Youngjin;Park, Chan Rok
    • Journal of radiological science and technology
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    • v.44 no.3
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    • pp.225-229
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    • 2021
  • The digital image such as medical X-ray and nuclear medicine field mainly contains noise distribution. The noise degree in image degrades image quality. That is why, the noise reduction algorithm is efficient for medical image field. In this study, we confirmed effectiveness of application for median modified Wiener filter (MMWF) algorithm for noise reduction in PET/MR image compared with median filter image, which is used as conventional noise redcution algorithm. The Jaszczak PET phantom was used by using 18F solution and filled with NaCl+NiSO4 fluids. In addition, the radioactivity ratio between background and six spheres in the phantom is maintained to 1:8. In order to mimic noise distribution in the image, we applied Gaussian noise using MATLAB software. To evlauate image quality, the contrast to noise ratio (CNR) and coefficient of variation (COV) were used. According to the results, compared with noise image and images with MMWF algorithm, the image with MMWF algorithm is increased approximately 33.2% for CNR result, decreased approximately 79.3% for COV result. In conclusion, we proved usefulness of MMWF algorithm in the PET/MR images.