• 제목/요약/키워드: Lactobacillus farciminis

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Development of Species-Specific Primers for PCR Identification of Lactobacillus hilgardii and Lactobacillus farciminis in Kimchi

  • Lee, Myung-Ki;Ku, Kyung-Hyung;Kim, Young-Jin;Kim, Kyung-Hee;Kim, Yu-Ri;Yang, Hye-Jung
    • Preventive Nutrition and Food Science
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    • 제15권2호
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    • pp.159-166
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    • 2010
  • The aim of this study was to develop species-specific primer sets for kimchi Lactobacillus. Known gene sequences of Lactobacillus 16S rRNA were collected from the NCBI Gene bank, and 69 primer sets were designed using the homologous gene sequence. Six species of kimchi Lactobacilli were used as reference strains: Lactobacillus brevis KCTC3102, Lactobacillus farciminis KCTC3681, Lactobacillus fermentum KCTC3112, Lactobacillus hilgardii KCTC3500, Lactobacillus plantarum KCTC3099, and Lactobacillus sanfranciscensis KCTC3205. PCR amplification and gel electrophoresis were performed to identify the accuracy and specificity of the developed primer set. The results show that the primer set of 5'-aagcctgcgaaggcaag-3' & 5'-aggccaccggctttg-3', 5'-acatactatgcaaatctaagagattagacg-3' & 5'-actgagaatggctttaagagattagcttac-3' resulted in a specific PCR band on L. hilgardii, and primer set of 5'-ctaataccgcataacaactactttcacat-3' & 5'-aacttaataaaccgcctacattctctttac-3' on L. farciminis. The results indicate that the developed primer sets can provide a useful tool for the identification and differentiation of L. hilgardii and L. farciminis from other Lactobacillus species of kimchi.

Lactobacillus farciminis로부터 미지의 작은 플라스미드의 분리와 염기서열 분석 (Isolation and sequence analysis of a small cryptic plasmid from Lactobacillus farciminis KCTC3681)

  • 이은모;최신건
    • 산업기술연구
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    • 제28권B호
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    • pp.53-57
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    • 2008
  • From the extensive screening for small cryptic plasmid among about 23 lactic acid bacteria (LAB), 2.4 kb of cryptic plasmid was isolated from Lactobacillus farciminis strain KCTC 3681 and named as pLF24. The plasmid pLF24 was a circular molecule of 2,396 base-pairs in length with a G+C content of 38%. Two protein-coding sequences could be predicted. ORF1 and ORF2 showed homologies to plasmids of gram-positive bacteria. The replication protein coded by ORF2 and the plus origin, were similar to replication regions of other gram-positive bacteria as shown in plasmids such as pLH2, pLS141-1 and pLC2. The nucleotide sequence of pLF24 was deposited into Genbank data base with an accession number of EU429343. The newly isolated plasmid can be used for construction of shuttle vector in Lactobacillus bacteria.

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시금치 유래 천연 아질산염 생산의 최적화 연구 (Study of optimization of natural nitrite source production from spinach)

  • 김태경;서동호;성정민;구수경;전기홍;김영붕;최윤상
    • 한국식품과학회지
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    • 제49권4호
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    • pp.459-461
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    • 2017
  • 본 연구는 Lactobacillus 표준균주를 활용하여 시금치 발효액의 질산염을 아질산염으로 환원시켜 천연 아질산염 생산량의 최적화 조건을 확인하기 위하여 진행하였다. 유산균 종, 발효온도, 발효시간, 탄소원에 따른 아질산염 생산량에 대하여 평가하였다. 본 연구에서 사용한 Lactobacillus 표준균주에서는 L. farciminis(KCTC 3618)가 가장 많은 아질산염을 생산하였고, 발효온도 및 배양온도는 $30^{\circ}C$에서 36시간이 가장 많은 양의 아질산염을 생산하였다. 설탕을 첨가하였을 때 다른 탄소원을 첨가하였을 경우 보다 많은 양의 아질산염을 생산하였다. 따라서 L. farciminis를 스타터 배양로 활용하여 시금치의 질산염을 아질산염으로 환원($30^{\circ}C$, 36 h)한다면 산업적으로 가장 효과적으로 천연 아질산염을 생산할 수 있을 것으로 사료된다.

Identifications of Predominant Bacterial Isolates from the Fermenting Kimchi Using ITS-PCR and Partial 16S rDNA Sequence Analyses

  • CHIN HWA SUP;BREIDT FRED;FLEMING H. P.;SHIN WON-CHEOL;YOON SUNG-SIK
    • Journal of Microbiology and Biotechnology
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    • 제16권1호
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    • pp.68-76
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    • 2006
  • Despites many attempts to explore the microbial diversity in kimchi fermentation, the predominant flora remains controversial to date. In the present study, major lactic acid bacteria (LAB) were investigated in Chinese cabbage kimchi in the early phase of fermention. For the samples over pH 4.0, viable cell counts of Leuconostoc and Pediococcus were $10^6\;cfu/ml$ and below $10^2\;cfu/ml$, respectively, and 20 isolates out of 172 were subjected to a biochemical identification (API 50 CH kit) as well as molecular-typing methods including ITSPCR with a RsaI digestion and 16s rRNA gene sequence analysis for species confirmation. Seven isolates were nicely assigned to Lb. brevis, 6 to Leuconostoc spp. (2 mesenteroides, 2 citreum, I carnosum, I gasicomitatum), 4 to Weissella (3 kimchii/cibaria, 1 hanii) and 2 to other Lactobacillus spp. (1 farciminis, 1 plantarum). On the other hand, the biochemical identification data revealed 9 strains of Lb. brevis, 6 strains of Leuconostocs,2 strains of Lb. plantarum and 1 strain each of Lb. coprophilus and Lactococcus lactis. However, a single isolates, YSM 16, was not matched to the ITS-PCR database constructed in the present study. Two Lb. brevis strains by API 50 CH kit were reassigned to W kimchii/cibaria, Lb. coprophilus or W hanii, respectively, judging from the results by the above molecular typing approaches. As a whole, the identification data obtained by the biochemical test were different from those of ITS-PCR molecular method by about $63\%$ at genus-level and $42\%$ at species-level. The data by the ITS-PCR method conclusively suggest that predominant LAB species is probably heterolactic Lb. brevis, followed by W kimchii/cibaria, Leuc. mesenteroides, and Leuc. citreum, in contrast to the previous reports [3] that Leuc. mesenteroides is the only a predominant species in the early phase kimchi fermentation.

곡류 및 두류를 이용한 젖산균 전배양용 식용 배지의 제조 (Edible Culture Media from Cereals and Soybeans for Pre-cultivation of Lactic Acid Bacteria)

  • 박소림;박선현;장지은;양혜정;문성원;이명기
    • 한국식품영양과학회지
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    • 제42권6호
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    • pp.991-995
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    • 2013
  • 본 연구는 곡류 및 두류를 이용하여 식용 가능한 젖산균 모배양용 식용배지를 개발하고자 실시하였다. 식용 배지의 제조를 위하여 곡류는 발아현미, 찰현미, 발아찰현미를 사용하였고, 두류는 대두콩(대두콩, 껍질을 제거한 대두콩, 발아 대두콩, 껍질을 제거한 발아 대두콩)과 검은 대두콩(검은 대두콩, 껍질을 제거한 검은 대두콩, 발아 검은 대두콩, 껍질을 제거한 발아 검은 대두콩)으로 나누어서 젖산균 증식배지를 제조하였다. 실험에 사용된 젖산균은 Lactobacillus(Lb.) farciminis, Lb. homohiochii, Lb. pentosus, Lb. plantarum, Leuconostoc(Leu.) paramesenteroides, Leu. citreum 및 Leu. lactis 총 7종이다. 곡류를 이용한 식용배지에서 배양한 경우, 7개 종균의 평균 균수는 7.6~8.0 log CFU/mL의 균수를 나타내었다. 대두콩으로 제조한 식용배지는 껍질을 제거한 발아 대두콩 배지에서 대부분의 균이 높은 증식량을 나타내었다. 특히 Lb. plantarum은 10.08 log CFU/mL로 가장 높은 균수를 보였다. 검은 대두콩의 경우는 껍질을 제거한 발아 검은 콩배지에서 증식량이 많았다. Lb. homohiochii는 껍질제거 발아 검은 콩배지에서 9.90 log CFU/mL로 가장 많은 증식량을 보였다. 모든 결과에서 곡류와 두류를 이용한 식용배지를 이용하여 배양할 때 젖산균 증균량이 우수함을 알 수 있었고, 특히 가장 증식량이 우수한 '껍질을 제거한 발아 검은 대두콩' 식용 배지를 향후 젖산균 모배양에 이용하는 것을 권장한다.