• 제목/요약/키워드: K-mean cluster analysis

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Evaluation for anaerobic germinability of rice germplasm for direct-seeding cultivation under submerged conditions

  • Rauf, Muhammad;Choi, Yu-Mi;Lee, Sukyeung;Lee, Myung-Chul;Oh, Sejong;Hyun, Do Yoon
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.71-71
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    • 2017
  • Stable stand establishment is pre-requisite in direct rice seeding system for obtaining optimal yield of rice crop in rain-fed and waterlogged areas. Anaerobic condition on waterlogged soil causes low germination which significantly reduces crop yield. Due to low availability of tolerant genetic material for anaerobic germination, there is urgent need to evaluate rice germplasm for better germinability under anaerobic conditions. Seeds of the 185 rice accessions were evaluated for germination vigor and coleoptile length under anaerobic conditions. The variation among germplasm was tested for significance using analysis of variance and various multivariate components. Significant level of variation was observed among all accessions for germination vigor and coleoptiles length. Although highest mean values for coleoptiles length (2.1cm) and germination rate (60%) were observed in japonica accessions but maximum coleoptile length (4.68cm) and germination rate (96%) was found in indica genotype CO18. A highly significant and positive correlation was also observed between germination vigor and coleoptiles length, which signify the importance of elongated coleoptile under anaerobic conditions. The PCA analysis illustrated that 97.24% variation was accounted by PC1 while PC2 and PC3 explained 2.54% and 0.24% variation for germination vigor and coleoptile length. PCA scattered plot divided the accessions in four various groups. All AG tolerant accessions were included in group I. Likewise in the case of cluster analysis, two major clades (I and II) were formed. All accessions showing >40% germination rate were included in clade I, whereas all other accessions with <40% germination rate were grouped in clade II. Further more highly tolerant accessions (>80% germination) were grouped in sub-cluster IA.

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해발고도 및 인접성에 의한 제주도 토양통 분포특성 (Distribution of Soil Series in Jeju Island by Proximity and Altitude)

  • 문경환;임한철;현해남
    • 한국토양비료학회지
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    • 제40권3호
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    • pp.221-228
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    • 2007
  • 제주도 토양의 분포특성을 객관적으로 파악하기 위하여 인접정도 및 해발고도별 토양통의 분포를 GIS기법을 이용하여 정량화하고 이를 바탕으로 통계분석을 실시하였다. 토양통 간의 인접정도는 각 통별 경계의 인접비율로 나타내었고 이를 토양통의 고유특성으로 파악하여 군집분석을 실시한 결과 5개의 군집으로 분류할 수 있었고, 이러한 결과는 정밀토양도에서 토색별로 4개의 토양군으로 구분한 분류체계와 유사한 결과였다. 정밀토양도에서는 토색, 해발고도, 토양의 화학적 특성 등 다양한 근거로 분류하였으나 이번 연구에서는 인접성 한 개의 기준으로 분류한 것으로 인접정도의 관점에서 볼 때 관행의 분류체계가 합리적일 수 있음을 의미하고 있다. 해발고도별 토양통 분포면적으로부터 토양통의 대표해발고도를 수치화할 수 있었고, 이를 바탕으로 토양통간 해발고도별 분포순서를 정할 수 있었다. 분포순서는 한라산의 정상에서 4면의 해안방향으로 갈색산림토 - 흑색토 - 농암갈색토 - 암갈색토의 순서로 토양이 연쇄되고 있어, 제주도 토양의 생성과정과 밀접하게 연관되는 것으로 추정되었다.

노인의 여가참여유형에 따른 생활만족도의 (Differences in Life Satisfaction by Leisure Participation Types of the Elderly)

  • 김외숙
    • 가족자원경영과 정책
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    • 제20권1호
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    • pp.23-42
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    • 2016
  • The purpose of this study was to explore a typology of leisure participation, investigate determinants of leisure participation types, and analyze differences in life satisfaction by the types of leisure participation of the elderly. The data source for this research was the 2014 Time Use Survey conducted by the Korea National Statistical office (KNSO). The statistical methods for the analysis were mean, standard deviation, ANOVA, Duncan test, cluster analysis, and logistic regression analysis. Leisure participation were classified into five types based on five categories; social activities, religious activities, media, sports, time-spending activity. The five types were named "general", "insufficient", "religious oriented", "media oriented", and sports oriented" type. Gender, health condition were identified as important determinants for the types. Life satisfaction was different according to leisure participation type of the elderly. Religious oriented type showed the highest score of life satisfaction and media oriented type showed the lowest.

노인의 시간배분 유형에 따른 시간사용만족도의 차이 (Differences in Time Use Satisfaction by Time Allocation Types of the Elderly)

  • 김외숙
    • 가족자원경영과 정책
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    • 제19권1호
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    • pp.163-180
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    • 2015
  • The purpose of this study was to explore a typology of time allocation, investigate determinants of time allocation types, and analyze differences in time use satisfaction by the types of time use of the elderly. The data source for this research was the 2009 Time Use Survey conducted by the Korea National Statistical office (KNSO). The 4,699 time diaries (3,552 for weekday, 1,147 for Sunday) completed by the elderly over the age of 60 were analyzed using mean, standard deviation, chi-square, cluster analysis, ANOVA analysis, Duncan test, and multinomial logistic regression analysis. Time allocation of the elderly was classified into four types: personal care oriented, work oriented, leisure oriented, and balanced type. Gender, age, education, employment status, income, and the presence of spouse were identified as determinants for each type. According to the types of time allocation, time use satisfaction was different on week days.

기후인자가 일본잎갈나무의 연륜생장에 미치는 영향 분석 (Effect of Climate Factors on Tree-Ring Growth of Larix leptolepis Distributed in Korea)

  • 임종환;성주한;천정화;신만용
    • 한국산림과학회지
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    • 제105권1호
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    • pp.122-131
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    • 2016
  • 본 연구는 연륜기후학적 방법에 의해 기후인자가 우리나라에 분포하는 일본잎갈나무의 연륜생장에 미치는 영향을 구명하기 위해 수행하였다. 본 연구에서는 먼저 일본잎갈나무의 연도별 생장특성을 분석하기 위해 제5차 국가산림자원자료에서 수집된 일본잎갈나무의 연륜생장 자료를 정리하였다. 한편 일본잎갈나무의 연륜생장과 기후변수와의 관계를 구명하기 위해 1950년부터 2010년까지 정리된 월평균 기온과 월강수량 자료를 시군 단위로 정리하였다. 기후조건의 유사성에 근거하여 일본잎갈나무의 시군별 연륜생장 자료를 군집분석한 결과 6 개의 기후 군집으로 구분할 수 있었다. 이와 함께 연륜생장 자료에 대한 크로스데이팅과 표준화 절차를 통해 각 군집별 지표연대기를 제작하였다. 각 군집별 지표연대기의 적합성은 연륜생장의 평균민감도, 자기상관계수, 신호 대 잡음비, 신호강도와 같은 기초통계량 분석을 통해 점검하였다. 최종적으로 각 군집별 일본잎갈나무의 연륜생장과 기후변수 간의 관계를 구명하기 위해 반응함수 분석을 실시하였다. 본 연구에서 얻어진 결과는 일본잎갈나무의 지역별 생장특성의 추정뿐만 아니라 기후변화에 따른 생장패턴의 변화 예측에 필요한 유용한 정보로 활용될 수 있을 것으로 기대된다.

Genetic Diversity among Indian Oak Tasar Silkworm, Antheraea proylei J. Revealed by ISSR Markers

  • Devi, Kanghujam Ibsorani;Ponnuvel, Kangayam M.;Singh, Laishram Somen;Singh, Kangjam Chaoba;Dutta, Karabi
    • International Journal of Industrial Entomology and Biomaterials
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    • 제24권2호
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    • pp.57-61
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    • 2012
  • The Indian Oak Tasar silkworm, Antheraea proylei J. is a beneficial insect with great economic importance in India for its silk production. In this study, six populations of Antheraea proylei and A. frithi Moore (as an out group) were subjected to inter simple sequence repeat (ISSR) marker analysis in order to assess its genetic diversity. Fifteen ISSR primers produced 91 markers among different breeds of A. proylei and A. frithi of which 89 are polymorphic, generating 97.8% polymorphism. The dendrogram constructed using the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) and cluster analysis made using Nei's genetic distance resulted in the formation of one major group containing four sub-groups separating the breeds. This result suggests that ISSR amplification is potentially useful for molecular characterization of oak tasar silkworm genotypes.

University Student Characteristics of Type of Job Values and Key Competency

  • Bok, Mi-Jung
    • 한국컴퓨터정보학회논문지
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    • 제23권5호
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    • pp.47-53
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    • 2018
  • This study is aimed to determine types of job values which is searched by 242 university student in Gwangju, to study characteristics of each type, and to analyze key competency of each type. The data were analyed with PASW 18.0 using frequency analysis, k-mean cluster analysis, crosstabs and one-way ANOVA. According to findings, first of all, university student types of job values are divided into 4 groups; a type of intrinsic job values(27.7%), a type of active job value(32.2%), a type of external job value(12.4%), a type of passive job value(27.7%). Secondly, the type of job values showed statistically significant difference only in the monthly allowance of socio-economic variables. Thirdly, the type of job values showed statistically significant difference 'communication', 'mathematics', 'problem solving', 'self development', 'resource management', 'interpersonal skills', 'technical ability', 'understanding organizations' and 'work ethics'.

K-means 클러스터링을 이용한 자율학습을 통한 잠재적간 질환 환자의 분류를 위한 계층 정의 (Identifying Classes for Classification of Potential Liver Disorder Patients by Unsupervised Learning with K-means Clustering)

  • 김준범;오교중;오근휘;최호진
    • 한국정보과학회:학술대회논문집
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    • 한국정보과학회 2011년도 한국컴퓨터종합학술대회논문집 Vol.38 No.1(C)
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    • pp.195-197
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    • 2011
  • This research deals with an issue of preventive medicine in bioinformatics. We can diagnose liver conditions reasonably well to prevent Liver Cirrhosis by classifying liver disorder patients into fatty liver and high risk groups. The classification proceeds in two steps. Classification rules are first built by clustering five attributes (MCV, ALP, ALT, ASP, and GGT) of blood test dataset provided by the UCI Repository. The clusters can be formed by the K-mean method that analyzes multi dimensional attributes. We analyze the properties of each cluster divided into fatty liver, high risk and normal classes. The classification rules are generated by the analysis. In this paper, we suggest a method to diagnosis and predict liver condition to alcoholic patient according to risk levels using the classification rule from the new results of blood test. The K-mean classifier has been found to be more accurate for the result of blood test and provides the risk of fatty liver to normal liver conditions.

The Development of Climax Index by Analysis of Eco-morphological Characters for Major Deciduous Tree Species

  • Kim, Ji Hong;Chung, Sang Hoon;Lee, Jeong Min;Kim, Se Mi
    • Journal of Forest and Environmental Science
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    • 제28권4호
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    • pp.199-204
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    • 2012
  • This study was conducted to estimate climax index by eco-morphology for major 36 tree and sub-tree species in natural deciduous forests so as to interpret seral position of each species in the forest community. Fourteen eco-morphological characters which were considered to be associated with successional gradient in the forest were selected for the study. Four levels per character for each species were given on a standardized scale of increasing climax, and the index was computed by the proportion of the sum of total scores, expressed by percent values. With calculated mean value of 54.8 for all indices, Carpinus cordata had the highest index value of 90.5, and Populus davidiana recorded the lowest of 13.2. The most climax group, greater than 70 of the index, contained only 8 species, intermediate group, between 41 to 70 of the index, had 23 species, and the most pioneer group, less than 40 of the index comprised 5 species. The result has noticed that the large number of species would take advantage of most diverse resource and niche in the intermediate stage of the sere in the forest. By cluster analysis all 36 species were subjected to be classified into several species groups which had common similar eco-morphological characteristics. The indices were additionally plotted on the two dimensional graph to recognize the positions related to the light absorption factor and reproduction factor. The climax index of tree and sub-tree species developed by this study could be applied to understand the present status of successional stage on the basis of species composition by the method of summing up the indices. And comparison of forest successional stage among various forest communities could be done by summing up the climax indices of composed species in each community. However, this kind of applied methodology should be limited to the forest of similar species composition and site condition.

역궤적 이동경로별 용인지역의 컬럼에어로졸 특성 (Columnar Aerosol Properties at Yongin According to Transport Paths of Back Trajectories)

  • 박지수;최용주;김영성
    • 한국대기환경학회지
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    • 제33권2호
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    • pp.97-107
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    • 2017
  • Columnar aerosol properties retrieved from solar radiation were investigated at the Yongin (YGN) SKYNET site over seven years from October 2008 to October 2015. Hourly averages were calculated when the data were available, and back trajectories were calculated to examine the effects of regional transport. Data recovery rate was low at 6.6%, primarily because solar radiation was measured only under daytime clear-sky conditions. Mean values of the fine-mode volume fraction (FMVF) as well as its seasonal variation were similar to those of $PM_{2.5}/PM_{10}$ although the coarse-mode fraction of column aerosols tended to be slightly larger. The values of single scattering albedo (SSA) and FMVF were lower in spring due to the effects of mineral dust, and higher in summer due to secondarily-formed inorganic ions. Back trajectories were grouped into five clusters according to the directions of transport paths. Aerosol loading was highest for Cluster 2 from the northwest, but SSA and FMVF were not particularly high or low because aerosols were composed of various materials with different properties. Aerosol loading was lowest for Cluster 5 from the Pacific Ocean passing through the south end of Japan, whose SSA and FMVF were highest as secondarily-formed inorganic ions were mixed.