• 제목/요약/키워드: Junction-based

검색결과 556건 처리시간 0.027초

Analysis of Genomic Structure of an Aflatoxin Biosynthesis Homologous Gene Cluster in Aspergillus oryzae RIB Strains

  • Lee, Yun-Hae;Tominaga, Mihoko;Hayashi, Risa;Sakamoto, Kazutoshi;Yamada, Osamu;Akita, Osamu
    • 한국균학회소식:학술대회논문집
    • /
    • 한국균학회 2006년도 추계학술대회 및 정기총회
    • /
    • pp.32-44
    • /
    • 2006
  • To investigate non-aflatoxin-production of A. oryzae at the molecular level, an aflatoxin biosynthesis gene homolog cluster of RIB 40 was analyzed. Although most genes in the corresponding cluster exhibited from 97 to 99 % similarity to those of Aspergillus flavus, three genes shared 93 % similarity or less. In addition, although slight expression of aflR, positive transcriptional regulator gene, was detected in some A. oryzae strains having seven aflatoxin biosynthesis homologous genes, other genes related to aflatoxin production were not detected. RIB strains were mainly divided into group 1, having seven aflatoxin biosynthesis homologous genes (aflT, nor-i, aflR, norA, avnA, verB, and vbs), and group 2, having three homologous (avnA, verB, and vbs). Partial aflatoxin homologous gene cluster of RIB62 from group 2 was sequenced and compared with that of RIB40 from group 1. RIB62 showed a large deletion upstream of ver-1 with more than half of the aflatoxin homologous gene cluster missing including aflR, a positive transcriptional regulatory gene. Adjacent to the deletion of the aflatoxin homologous gene cluster, RIB62 has a unique sequence of about 8kb and a telomere. Southern analysis of A. oryzae RIB strains with four kinds of probe derived from the unique sequence of RIB62 showed that all group 2 strains have identical hybridizing signals. Polymerase chain reaction with specific primer set designed to amplify the junction between ver-1 and the unique sequence of RIB62 resulted in the same size of DNA fragment only from group 2 strains. Based on these results, we developed a useful genetic tool that distinguishes A. oryzae group 2 strains from the other groups' strains and propose that it might have differentiated from the ancestral strains due to chromosomal breakage.

  • PDF

마우스세포주 Balb/c 3T3 A31-1-1에서 Epigallocatechin gallate(EGCG)의 세포암화 억제효과에 대한 유전자발현 해석 (Genome-based Gene Expression Analysis of EGCG-mediated Cell Transformation Suppression Effect in Mouse Cell line Balb/c 3T3 A31-1-1)

  • 정기경;서수경;김태균;박문숙;이우선;박순희;김승희;정해관
    • 한국환경성돌연변이발암원학회지
    • /
    • 제26권4호
    • /
    • pp.125-132
    • /
    • 2006
  • Previous studies showed that epigallocatechin gallate(EGCG) have substantial effects of suppressing the N-methyl-N'-nitro-N-nitrosoguanidine(MNNG)-initiated cell transformation process on the bases of foci formation frequency and loss of anchorage dependency. In this study we tried to clarify the molecular mechanism of suppressing the cell transformation process. Mouse cell line balb/c 3T3 A31-1-1 was exposed 2 days to MNNG followed by 15 days 12-O-tetradecanoylphorbol-13-acetate(TPA) treatment for our transformation process. EGCG was added after the time point of 24 hours exposure to TPA and incubated for 19 days. 2029 genes were selected in our transformation process that showed fold change value of 1.5 or more in the microarray gene expression analysis covering the mouse full genome. These genes were found to be involved mainly in the cell cycle pathway, focal adhesion, adherens junction, TGE-$\beta$ signaling, apoptosis, lysine degradation, insulin signaling, ECM-receptor interaction. Among the genes, we focused on the 631 genes(FC>0.5) reciprocally affected by EGCG treatment. Our study suggest that EGCG down-regulate the gene expressions of up stream signaling factors such as nemo like kinase with MAPK activity and PI3-Kinase, Ras GTPase and down stream factors such as cyclin D1, D2, H, T2, cdk6.

  • PDF

리브플러스 PC슬래브의 수평전단강도 평가 (Evaluation on the Horizontal Shear Strength of Precast Concrete Slab with the Inverted-Rib-Plus)

  • 박금성;이상섭;최윤철
    • 한국구조물진단유지관리공학회 논문집
    • /
    • 제15권6호
    • /
    • pp.156-165
    • /
    • 2011
  • 본 연구는 PC와 RC부분이 만나는 접합면에 대한 구조적 거동과 수평 전단강도 평가를 위한 실험적 연구이다. 접합면에서의 수평전단 내력은 접합면의 거칠기나 전단보강근 유무에 따라 결정되어진다. 본 연구에서는 전단 보강근의 형상이 루프형과 래티스형로 구분하고, 보강근 간격 등에 따라 총 4개의 수평전단강도 실험체를 제작하여 실험을 수행하였다. 실험결과, 접합면에서 수평전단 강도는 수직방향 변형에 의해 지배됨을 알 수 있었다. 보강근 형상에 따른 비교 결과, 루프형의 실험체가 평균 초기균열하중, 평균 최대하중 및 접합면의 평균 초기강성 측면에서 각각 33.7%, 45.9%와 55.2%정도 큰 것으로 나타났다. 현행의 국내 전단강도 평가식과 비교한 결과, 루프형 전단보강 실험체는 2.32~4.23배, 래티스형 전단보강 실험체는 1.65~3.06배 상회하는 것으로 나타났다. 따라서 접합면의 거동이나 구조설계기준에 의한 내력이 안전측으로 평가되어 현장에 적용하는 데에는 별다른 문제는 없는 것으로 판단된다.

Effects of substitution of soybean meal with rapeseed meal and glutamine supplementation on growth performance, intestinal morphology, and intestinal mucosa barrier of Qiandongnan Xiaoxiang Chicken

  • Zhang, Bolin;Liu, Ning;Hao, Meilin;Xie, Yuxiao;Song, Peiyong
    • Animal Bioscience
    • /
    • 제35권11호
    • /
    • pp.1711-1724
    • /
    • 2022
  • Objective: The present study was to evaluate the effects of different rapeseed meal substitution (RSM) and glutamine (Gln) supplementation on growth performance, intestine morphology, and intestinal mucosa barrier of broilers. Methods: Four hundred and twenty Qiandongnan Xiaoxiang Chicken at 1 day of age with similar weight were chosen and were randomly assigned into 7 groups, consisting of 10 replicates per group and 6 broilers per replicate. Three groups were provided with diets separately containing 0%, 10%, and 20% RSM, and the other four groups were fed with diets separately supplemented with 0.5% and 1% Gln based on the inclusion of 10% and 20% RSM. At 21 and 42 days of age, 10 broilers per group were chosen to collect plasma and intestinal samples for further analysis. Results: The results showed that 10% RSM decreased average daily feed intake (ADFI) and average daily weight gain (ADG) of broilers at 21 days of age (p<0.05). Furthermore, both ADFI and ADG of broilers at 21 and 42 days of age were decreased by 20% RSM, while feed conversion ratio (FCR) was increased (p<0.05). Besides, 10% RSM resulted in lower intestinal villus height and the ratio of villus height to crypt depth, deeper crypt depth (p<0.05), combined with the lower mRNA expressions of occludin, claudin-1, and zonula occludens-1 (ZO-1) in broilers at 21 days of age (p<0.05). Similar results were also observed in broilers at 21 and 42 days of age fed with 20% RSM. However, 1% Gln improved the growth performance of broilers fed with 10% and 20% RSM (p<0.05), ameliorated intestine morphology and elevated mRNA expressions of occludin, claudin-1 and ZO-1 (p<0.05). Conclusion: In conclusion, the increasing inclusion of RSM resulted in more serious effects on broilers, however, 1.0% Gln could reverse the negative effects induced by the inclusion of RSM.

소아청소년의 하악 대구치에서 협측소와 및 협측소와 결함의 발생 빈도 (Frequency of Buccal Pits and Defective Buccal Pits in Mandibular Molars of Children and Adolescents)

  • 김소영;송제선;김익환;최형준
    • 대한소아치과학회지
    • /
    • 제49권3호
    • /
    • pp.253-263
    • /
    • 2022
  • 협측소와는 하악 대구치 발달구의 말단에 나타나는 강한 점상의 함몰된 구조이다. 협측소와 결함은 협측소와가 상아질까지 침범한 상태로 정의할 수 있다. 이 연구는 콘빔 컴퓨터 단층촬영(CBCT) 분석을 통해 소아청소년의 하악 제1대구치 및 제2 대구치에서 협측소와 및 협측소와 결함의 발생 빈도를 조사하는 것을 목적으로 하였다. 연구는 2004년부터 2020년까지 연세대학교 치과병원 소아치과를 방문한 한국 소아청소년 417명을 대상으로 촬영한 CBCT 영상을 대상으로 수행하였다. 협측소와의 발현율은 29.1%로 보고되었다. 제4급 협측소와에 해당하는 협측소와 결함의 유병률은 총 7.9%였다. 협측소와는 양측성으로 나타나는 경향이 있었다. 이 연구는 협측소와의 빈도에 대해 가장 큰 표본 크기를 사용하여 시행한 포괄적인 연구이며, CBCT를 이용한 최초의 연구였다. 또한 협측소와 결함을 최초로 정의 내리고자 하였다.

담수환경에서 eDNA와 eRNA를 이용한 Microcystin 합성 남조류 탐색 및 세포 내 Microcystin 생합성 활성 변화 (Detection of Microcystin Synthetic Cyanobacteria and Variation of Intracellular Microcystin Synthesis Using by eDNA and eRNA in Freshwater Ecocystem)

  • 김건희;박채홍;조현진;권대률;황순진
    • 생태와환경
    • /
    • 제56권1호
    • /
    • pp.1-13
    • /
    • 2023
  • 북한강 수역에서 가장 많이 검출되는 Microcystin (MC)을 대상으로 하여 MC 생합성 유전자(mcyA gene), 남조류 세포밀도, MC 농도 사이의 관계를 분석하여 RNA-MC 환산식을 도출하고 남조류 세포 내 존재하는 MC 농도를 예측하였다. 북한강 수역에서 mcyA 유전자는 묵현천 합류 이후 북한강 하류 지점에서 주로 발견되었으며 평균적으로 다른 지점보다 높은 copy number가 발견되었다. 북한강 상류 의암호 수역의 경우, 공지천 지점에서 mcyA 유전자 copy number가 증가하였으며 9월 이후 북한강 수역 전체에서 mcyA 유전자 copy number는 감소하였다. mcyA gene expression은 상류와 하류 수역의 시·공간적 차이가 존재하였으며 여름철 짧은 시기에 집중적으로 발현하였다. mcyA gene expression 양은 MC 농도와 상관성이 매우 높을 뿐만 아니라 MC을 생합성하는 것으로 알려진 Microcystis aeruginosa와 Dolichospermum circinale의 세포밀도와도 통계적으로 유의한 상관성이 존재하였다. RNA-MC 관계를 기반으로 도출된 6개의 환산식은 통계적 유의성을 보이며(p<0.05) 0.9 이상의 높은 상관계수(r)를 나타냈다. eRNA에 존재하는 MC 생합성 유전자 발현량은 수중의 남조독소 물질 합성을 판단하고 유전자의 활성 정도를 빠르게 정량하여 MC 발생 조기경보에 충분히 활용할 수 있을 것으로 판단된다.

ISE 기반의 임베디드 시스템을 이용한 실시간 수경재배 양액 모니터링 (Real-time Nutrient Monitoring of Hydroponic Solutions Using an Ion-selective Electrode-based Embedded System)

  • 한희조;김학진;정대현;조우재;조영열;이공인
    • 생물환경조절학회지
    • /
    • 제29권2호
    • /
    • pp.141-152
    • /
    • 2020
  • 본 연구는 양액 내 존재하는 다량 영양소의 농도를 실시간으로 측정하기 위해 이온 선택 전극 (ISE) 으로 구성된 임베디드 시스템의 개발을 보여준다. NO3, K 및 Ca 이온을 감지하기위한 PVC ISE, H2PO4를 감지하기위한 코발트 전극, 기준 전극, 샘플 용액이 담기는 챔버, 펌프 및 밸브를 사용하여 측정하는 시스템으로 구성된다. 양액 샘플양 조절과 데이터 수집을 위해서 데이터 Due 보드가 사용되었고, 각각의 샘플 측정 전에, 측정 중 발생하는 드리프트를 최소화시키기 위해 2 점 정규화 방법을 사용하였다. PVC 멤브레인을 기반으로 한 NO3 및 K 전극의 농도 예측 성능은 표준 분석기의 결과와 근접한 일치 (R2 = 0.99) 나타내며 만족스러운 결과를 나타냈다. 하지만, Ca II 이온 투과체 제조된 Ca 전극은 고농도 양액 농도에서 Ca 농도를 55 %로 낮게 측정하였다. 코발트 전극 기반 인산 측정은 반복측정 중에 발생한 코발트 전극의 불안정한 신호로 인해 표준 방법과 비교하여 45 ~ 155 mg / L의 인산 농도 범위에서 24.7 ± 9.26 %의 비교적 높은 오차를 나타냈다. 수경 P 감지의 예측 능력을 향상시키기 위해 코발트 전극의 신호 컨디셔닝에 대한 추가 연구가 필요함으로 판단된다.

Dietary corn resistant starch regulates intestinal morphology and barrier functions by activating the Notch signaling pathway of broilers

  • Zhang, Yingying;Liu, Yingsen;Li, Jiaolong;Xing, Tong;Jiang, Yun;Zhang, Lin;Gao, Feng
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제33권12호
    • /
    • pp.2008-2020
    • /
    • 2020
  • Objective: This study was conducted to investigate the effects of dietary corn resistant starch (RS) on the intestinal morphology and barrier functions of broilers. Methods: A total of 320 one-day-old broilers were randomly allocated to 5 dietary treatments: one normal corn-soybean (NC) diet, one corn-soybean-based diet supplementation with 20% corn starch (CS), and 3 corn-soybean-based diets supplementation with 4%, 8%, and 12% corn resistant starch (RS) (identified as 4% RS, 8% RS, and 12% RS, respectively). Each group had eight replicates with eight broilers per replicate. After 21 days feeding, one bird with a body weight (BW) close to the average BW of their replicate was selected and slaughtered. The samples of duodenum, jejunum, ileum, caecum digesta, and blood were collected. Results: Birds fed 4% RS, 8% RS and 12% RS diets showed lower feed intake, BW gain, jejunal villus height (VH), duodenal crypt depth (CD), jejunal VH/CD ratio, duodenal goblet cell density as well as mucin1 mRNA expressions compared to the NC group, but showed higher concentrations of cecal acetic acid and butyric acid, percentage of jejunal proliferating cell nuclear antigen-positive cells and delta like canonical Notch ligand 4 (Dll4), and hes family bHLH transcription factor 1 mRNA expressions. However, there were no differences on the plasma diamine oxidase activity and D-lactic acid concentration among all groups. Conclusion: These findings suggested that RS could suppress intestinal morphology and barrier functions by activating Notch pathway and inhibiting the development of goblet cells, resulting in decreased mucins and tight junction mRNA expression.

상아질과 Gutta-Percha에 대한 근관충전용 Sealer의 결합강도의 측정 (MEASUREMENT OF ADHESION OF ROOT CANAL SEALER TO DENTINE AND GUTTA-PERCHA)

  • 허미자;유미경;이세준;이광원
    • Restorative Dentistry and Endodontics
    • /
    • 제28권1호
    • /
    • pp.89-99
    • /
    • 2003
  • The purpose of this study was to investigate the bonding of resin- based root canal sealer, AH26 when the sealer was applied as a thin layer between dentine and gutta-percha surface. In this study forty non-caries extracted human molars and resin-based root canal sealer(AH 26, DeTrey/Dentsply, Germany) were used. Disks of gutta-percha, 6mm in diameter.6mm thick (Diadent/Dentsply, Korea) for thermoplastic obturation were used and dentin surfaces were treated with 2% NaOCl(Group 1) or 2%NaOCl+17% EDTA(Group 3). Disks of gutta-Percha, 6mm in diameter.6mm thick (Diadent/Dentsply, Korea) for conventional obturation were used and dentin surface were treated with 2% NaOCl(Group 2) or 2%NaOCl+17% EDTA(Group 4). Enamel was removed by a horizontal section 1mm below the deepest portion of the central occlusal groove by using a watercooled low speed diamond saw. A second horizontal section was done around cementoenamel junction. Exposed dentin surface was cut to approximately $8{\times}8{\;}mm$ rectangular shape and was ground against 320, 400, 600 grade silicon carbide abrasive paper serially. After grinding, the dentine surface were soaked in a solution of 2% NaOCl for 30 minutes and twenty of specimens were treated with 17% EDTA solution for 1 minute. The treated specimens were washed and dried, Root canal sealer, AH26 was prepared according to the manufacture's instructions The Gutta-percha and dentin surface were coated with a thin layer of the freshly mixed seal or. The specimens were left overnight at room temperature. After their initial set, they were transferred to an incubator at $37$^{\circ}C$ for 72 h. After 72 hours, resin blocks were made. The resin block was serially sectioned vertically into stick of $1{\cdot}1mm$. Twenty sticks were prepared from each group. After that, tensile bond strength f3r each stick was measured with Microtensile Tester Failure patterns of the specimens at the interface between gutta-percha and dentin were observed under the SEM(x1000) and Stereomicroscope (LEICA M42O, Meyer Inst., TX U.S.A) at 1.25 x25 magnification. The results were statistically analysed by using a One-way ANOVA and Tukey's test. The results were as follows; 1. Tensile bond strengths($mean{\pm}SD$) were expressed with ascending order as follows: Group 1, $3.09{\pm}$ 1.05Mpa : Group 2, $6.23{\pm}1.16MPa$ : Group 3, $7.12{\pm}1.07MPa$ : Group 4, $10.32{\pm}2.06MPa$. 2. Tensile bond strengths of the group 2 and 4 used disks of gutta-percha for conventional obturation were significantly higher than that of the group 1 and 3 used fir thermoplastic obturation. (p < 0.05). 3. Tensile bond strengths of the group 3 and 4 treated with 2% NaOC1+17% EDTA were significantly higher than that of the group 1 and 2 treated with 2% NaOCl. (p < 0.05). 4. In analysis of failure patterns at the interface between sealer and gutta-percha, there were observed 49 (61%)cases of adhesive failure patterns and 31 (39%) cases of mixed failures patterns.

Effects of Replacing Soy Protein Concentrate with Fermented Soy Protein in Starter Diet on Growth Performance and Ileal Amino Acid Digestibility in Weaned Pigs

  • Min, B.J.;Cho, J.H.;Chen, Y.J.;Kim, H.J.;Yoo, J.S.;Wang, Q.;Kim, I.H.;Cho, W.T.;Lee, S.S.
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제22권1호
    • /
    • pp.99-106
    • /
    • 2009
  • For Exp. 1, 120 ((Yorkshire${\times}$Landrace)${\times}$Duroc) weaned pigs (7.96${\pm}$0.01 kg average initial BW, 21 days weaning) were used in a 28 d-growth assay to determine the effects of replacing soy protein concentrate (SPC) with fermented soy protein (FSP) in a starter diet (d 0 to 7) on the growth performance, apparent fecal amino acid digestibility and subsequent performance in weaned pigs. Dietary treatments included: i) FSP0 (basal diet; whey-skim milk powder-SPC based diet); ii) FSP5 (replacing SPC with 5% FSP); iii) FSP10 (replacing SPC with 10% FSP). Pigs were fed the phase I diet for 7 days, and then each group was fed a common commercial diet for 21 days to determine the effect of previous diet on subsequent performance. Average daily gain (ADG) from d 5 to 7 (linear effect, p = 0.01) and d 7 to 14 (linear effect, p<0.001) were increased as FSP level increased. The pigs fed with FSP was heavier than the pigs fed with SPC at d 5 to 7 and d 7 to 14 after weaning (p<0.05). In the entire period (d 0 to 28), there were no significant differences in weight gain and final weight between SPC and FSP diets (p>0.05). Average daily feed intake (ADFI) was higher in pigs fed with the 5% FSP diet than those fed with the other diets at d 0 to 2 post-weaning (quadratic effect, p = 0.05). Also, for the entire period of phase I (d 0 to 7), pigs consumed more 5% FSP diet compared to other treatments (quadratic effect, p = 0.03). Gain/feed (G/F) was not affected by dietary SPC or FSP in phase I and subsequent periods, but G/F from d 5 to 7 after weaning was improved linearly (p = 0.04) as dietary FSP level increased. Pigs fed with 10% FSP also improved G/F compared with those fed only SPC (p<0.05). At d 7, there were linear increments in fecal dry matter (DM) (p<0.1) and nitrogen (N) (p<0.01) digestibilities as the dietary FSP level increased. The digestibilities of fecal essential and total amino acids were increased as the FSP level increased (linear effect, p<0.1). For Exp. 2, three ((Yorkshire${\times}$Landrace)${\times}$Duroc) weaned barrows (average initial BW of 7.32 kg) were surgically fitted with a simple T-cannula approximately 15 cm prior to the ileo-cecal junction. The experimental designs were 3${\times}$3 latin squares with pigs and periods as blocking criteria. Dietary treatments and composition were the same as in Exp. 1. Apparent ileal N digestibility was increased as FSP level was increased (linear effect, p<0.05). The dietary treatments (SPC and FSP) did not affect apparent ileal DM digestibility (p>0.05). Among essential amino acids, apparent digestibility of ileal arginine (Arg), lysine (Lys), methionine (Met) and phenylalanine (Phe) were improved as the FSP level increased (linear effect, p<0.1). Also, apparent ileal total essential, non-essential and total amino acid digestibilities were increased linearly (p<0.1). In conclusion, replacing SPC with fermented soy protein appeared beneficial in growth performance, N and amino acid digestibility during the early 7 days after weaning, and an equivalent effect showed on growth performance in subsequent period of 7 to 28 days after weaning.