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Expression of Coat Color Associated Genes in Korean Brindle Cattle by Microarray Analysis

  • Lee, Hae-Lee;Park, Jae-Hee;Kim, Jong Gug
    • Journal of Embryo Transfer
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    • v.30 no.2
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    • pp.99-107
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    • 2015
  • The aim of the present study was to identify coat color associated genes that are differentially expressed in mature Korean brindle cattle (KBC) with different coat colors and in Hanwoo cows. KBC calves, before and after coat color appearance, were included. Total cellular RNA was isolated from the tail hair cells and used for microarray. The number of expressed coat color associated genes/probes was 5813 in mature KBC and Hanwoo cows. Among the expressed coat color associated genes/probes, 167 genes were the coat color associated genes listed in the Gene card database and 125 genes were the pigment and melanocyte genes listed in the Gene ontology_bovine database. There were 23 genes/probes commonly listed in both databases and their expressions were further studied. Out of the 23 genes/probes, MLPH, PMEL, TYR and TYRP1 genes were expressed at least two fold higher (p<0.01) levels in KBC with brindle color than either Hanwoo or KBC with brown color. TYRP1 expression was 22.96 or 19.89 fold higher (p<0.01) in KBC with brindle color than either Hanwoo or KBC with brown color, respectively, which was the biggest fold difference. The hierarchical clustering analysis indicated that MLPH, PMEL, TYR and TYRP1 were the highly expressed genes in mature cattle. There were only a few genes differentially expressed after coat color appearance in KBC calves. Studies on the regulation and mechanism of gene expression of highly expressed genes would be next steps to better understand coat color determination and to improve brindle coat color appearance in KBC.

The Effect Estrogen and Testosterone on the Expression of Melanogenesis-related Genes in Korean Brindle Cattle (칡소 모색별 피부세포 배양 시 Estrogen 과 Testosterone 첨가가 Melanogenesis 관련 유전자의 발현에 미치는 영향)

  • Seo, Hui-Gyeong;Lee, Ji-Hye;Kim, Sang-Hwan;Lee, Ho-Jun;Yoon, Jong-Taek
    • Journal of Embryo Transfer
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    • v.33 no.3
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    • pp.107-117
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    • 2018
  • The purpose of this study is to expression pattern of melanogenesis associate genes on cultured melanocyte layer cells in Korean Brindle Cattle(Dark, Brindle and Yellow) were analyzed to evaluate the effects of sex hormones on the control of melanogenesis pathways. Korean Brindle Cattle(Dark, Brindle and Yellow) melanocyte in the skin cells was collected. after the addition of estrogen and testosterone, the culture was analyzed for expression of cell activity and melanin genes for 72 hours. For the analysis of estrogen in different coat color other than the melanogenesis-related genes it is increasingly yellow showed low expression. in particular, the cells of the brindle coat color is low active and expression of genes. However, the testosterone was low, the expression of cell activity inhibiting MMP-2. the expression of melanin genes actually showed a tendency to increase gradually, which is testosterone compared with the estrogen to be considered that affect the skin cell layer brindle coat color. In this study, stimulation with estrogen triggered the inhibition of MC1R of the melanocyte in brindle coat color, but testosterone is induced MC1R in melanocyte. Therefore, considered the eumelanin or phaeomelanin activation are controlled caused by differential expression of sex hormones on melanocyte in Korean Brindle Cattle.

QTL Analysis of Teat Number Traits in an F2 Intercross between Landrace And Korean Native Pigs

  • Park, Hee-Bok;Han, Sang-Hyun;Yoo, Chae-Kyoung;Lee, Jae-Bong;Cho, Sang-Rae;Cho, In-Cheol
    • Journal of Embryo Transfer
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    • v.31 no.4
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    • pp.313-318
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    • 2016
  • The aim of this study was to identify quantitative trait loci (QTLs) influencing teat number traits in an $F_2$ intercross between Landrace and Korean native pigs (KNP). Three teat number traits (left;right;and total) were measured in 1105 $F_2$ progeny. All experimental animals were genotyped with 173 informative microsatellite markers located throughout the pig genome. We detect that seven chromosomes harbored QTLs for teat number traits: genome regions on SSC1;3;7;8;10;11;and 13. Six of fourteen identified QTL reached genome-wide significance. In SSC7;we identified a major QTL affecting total teat number that accounted for 5.6 % of the phenotypic variance;which was the highest test statistic (F-ratio = 61.1 under the additive model;nominal $P=1.3{\times}10^{-14}$) observed in this study. In this region;QTL for left and right teat number were also detected with genome-wide significance. With exception of the QTL in SSC10;the allele from KNP in all 6 identified QTLs was associated with decreased phenotypic values. In conclusion;our study identified both previously reported and novel QTL affecting teat number traits. These results can play an important role in determining the genetic structure underlying the variation of teat number in pigs.

Intra-night optical variability of AGN in COSMOS field

  • Kim, Joonho;Karouzos, Marios;Im, Myungshin;Kim, Dohyeong;Jun, Hyunsung David;Lee, Joon Hyeop;Pallerola, Mar Mezcua
    • The Bulletin of The Korean Astronomical Society
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    • v.42 no.1
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    • pp.45.1-45.1
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    • 2017
  • Optical variability is one way to probe the nature of the central engine of AGN at smaller linear scales, and previous studies have shown that optical variability of AGN is more prevalent at longer timescales and at shorter wavelengths. To understand the properties and physical mechanism of variability, we are performing the KMTNet Active Nuclei Variability Survey (KANVaS). Especially, we investigated intra-night variability of AGN with KMTNet data which observed COSMOS field during 3 separate nights from 2015 to 2016 in B, V, R, and I bands. Each night was composed of 5, 9, and 11 epochs with 20-30 min cadence. To find AGN in the COSMOS field, we applied multi-wavelength selection methods. Using X-ray, mid-infrared, and radio selection methods, 50-60, 130-220, 20-40 number of AGN are detected, respectively. Achieving photometric uncertainty ~0.01mag by differential photometry, we employed a standard time-series analysis tool to identify variable AGN, chi-square test. Preliminary results indicate that there is no evidence of intra-night optical variability of AGN. It is possible that previous studies discovered intra-night variability used inappropriate photometric error. However, main reason seems that our targets have fainter magnitude (higher photometric error) than that of previous studies. To discover variability of AGN, we will investigate longer timescale variability of AGN.

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An Experimental Study of Discharge Coefficient with Non-Circular Effervescent Type Twin-fluid Nozzle (비원형 Effervescent Type 이유체노즐의 Discharge Coefficient에 관한 실험적 연구)

  • Lee, Sang Ji;Park, Hyung Sun;Hong, Jung Goo
    • Proceedings of the Korean Society of Propulsion Engineers Conference
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    • 2017.05a
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    • pp.682-685
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    • 2017
  • An experimental study was carried out to investigate the injection characteristics of non-circular effervescent type twin-fluid nozzles. For this purpose, two types of non-circular nozzles (E1, E2) and one kind of circular nozzle (C) were used. At this time, the Aerorator mounted on the nozzle used three different diameters to match the aspect ratio with the nozzle exit area. Therefore, experiments were performed according to three aspect ratios for each nozzle, and a total experiments were conducted. Experiments were carried out by controlling the amount of air flowing after fixing the flow rate of the liquid, and the nozzle internal pressure and SMD were measured, and the jet image was taken from the nozzle. The discharge coefficients of the three kinds of nozzles were compared with the conventional equation and the Jedelsky's equation, and the Jedelsky's equation was found to be about 4 times larger. The droplet size (SMD) injected from the nozzle was found to be smaller in the non-circular shape than in the circular shape, which is expected to be caused by the difference of the discharge coefficient values.

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Comparison of Reproductive Parameters of Sow at the Rural Areas of Rangamati District of Bangladesh

  • Chakma, Sumen;Roy, Pantu Kumar;Paul, Ashit Kumar;Alam, M. Golam Shahi;Juyena, Nasrin Sultana
    • Journal of Embryo Transfer
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    • v.29 no.3
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    • pp.305-311
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    • 2014
  • It is imperative to know the reproductive parameters of the existing swine breed for profitable farming in Bangladesh. This study was designed to determine the reproductive parameters of sows at hilly areas. A total of 245 pigs with 47 breedable sows were included. The data on age at puberty, oestrous cycle length, oestrus duration, gestation length, interval between furrowing and onset of oestrus, first service pregnancy rate, service per pregnancy and number of piglets born per sow in local and cross bred sows were determined. The present study revealed that age at puberty of local and cross breed sows was $232.5{\pm}8.4$, $221.3{\pm}6.9$ days, respectively. Oestrous duration was $41.1{\pm}3.1$ hours. The interval between furrowing and onset of oestrus was shorter in cross bred sows. There was no variation in values of oestrus cycle length and gestation length. The first service pregnancy rate was higher in both the local and cross bred sow. Number of piglets per sow per farrowing was $6.1{\pm}2.2$ and 60.9% local sows gave birth of 3 to 5 piglets per farrowing whereas 75.0% cross bred sows gave birth of 6 to 9 piglets. These results suggest that reproductive parameters of local sow need to be improved for better production, and cross bred sows should be reared for obtaining expected productivity.

TEM analysis of IBAD/RABiTS substrates prepared by Tripod polishing (Tripod polishing을 이용한 IBAD/RABiTS 기판의 TEM 분석)

  • Choi, Soon-Mee;Chung, Jun-Ki;Yoo, Sang-Im;Park, Chan;Oh, Sang-Soo;Kim, Cheol-Jin
    • Progress in Superconductivity and Cryogenics
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    • v.8 no.1
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    • pp.9-14
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    • 2006
  • Sample preparation plays a critical role in microstructure analysis using TEM. Although TEM specimen has been usually prepared by jet-polishing or Ar-ion beam milling technique. these methods could not be applied to YBCO CC which is composed of IBAD or RABiTS substrates, several buffet layers, and YBCO superconducting layer because of big difference in mechanical strengths between the metallic phase and oxide phases. To obtain useful cross-sectional information such as interface between the phases or second phases in YBCO CC, it is prerequisite to secure the large area of thin section in the cross-sectional direction. The superconducting layer or the buffer layers are relatively weak and fragile compared to the metallic substrate such as Ni-5wt%W RABiTS of Hastelloy-based IBAD, and preferential removal of weak ceramic phases during polishing steps makes specimen preparation almost impossible. Tripod polisher and small jig were home-made and employed to sample preparation. The polishing angle was maintained <$1^{\circ}$ throughout the polishing steps using 2 micrometers attached to the tripod plate. TEM specimens with large and thin area could be secured and used for RABiTS/IBAD substrate analyses. In some cases, additional Ar-beam ion milling with low beam current and impinging angle was used for less than 30 sec. to remove debris or polishing media attacked to the specimens.

Evaluation of trueness and precision of removable partial denture metal frameworks manufactured with digital technology and different materials

  • Leonardo Ciocca;Mattia Maltauro;Elena Pierantozzi;Lorenzo Breschi;Angela Montanari;Laura Anderlucci;Roberto Meneghello
    • The Journal of Advanced Prosthodontics
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    • v.15 no.2
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    • pp.55-62
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    • 2023
  • PURPOSE. The aim of this study is to evaluate the accuracy of removable partial denture (RPD) frameworks produced using different digital protocols. MATERIALS AND METHODS. 80 frameworks for RPDs were produced using CAD-CAM technology and divided into four groups of twenty (n = 20): Group 1, Titanium frameworks manufactured by digital metal laser sintering (DMLS); Group 2, Co-Cr frameworks manufactured by DMLS; Group 3, Polyamide PA12 castable resin manufactured by multi-jet fusion (MJF); and Group 4, Metal (Co-Cr) casting by using lost-wax technique. After the digital acquisition, eight specific areas were selected in order to measure the Δ-error value at the intaglio surface of RPD. The minimum value required for point sampling density (0.4 mm) was derived from the sensitivity analysis. The obtained Δ-error mean value was used for comparisons: 1. between different manufacturing processes; 2. between different manufacturing techniques in the same area of interest (AOI); and 3. between different AOI of the same group. RESULTS. The Δ-error mean value of each group ranged between -0.002 (Ti) and 0.041 (Co-Cr) mm. The Pearson's Chi-squared test revealed significant differences considering all groups paired two by two, except for group 3 and 4. The multiple comparison test documented a significant difference for each AOI among group 1, 3, and 4. The multiple comparison test showed significant differences among almost all different AOIs of each group. CONCLUSION. All Δ-mean error values of all digital protocols for manufacturing RPD frameworks optimally fit within the clinical tolerance limit of trueness and precision.

Reduction of a Numerical Grid Dependency in High-pressure Diesel Injection Simulation Using the Lagrangian-Eulerian CFD Method (Lagrangian-Eulerian 기법을 이용한 고압 디젤 분무 시뮬레이션의 수치해석격자 의존성 저감에 관한 연구)

  • Kim, Sa-Yop;Oh, Yun-Jung;Park, Sung-Wook;Lee, Chang-Sik
    • Transactions of the Korean Society of Automotive Engineers
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    • v.20 no.1
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    • pp.39-45
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    • 2012
  • In the standard CFD code, Lagrangian-Eulerian method is very popular to simulate the liquid spray penetrating into gaseous phase. Though this method can give a simple solution and low computational cost, it have been reported that the Lagrangian spray models have numerical grid dependency, resulting in serious numerical errors. Many researches have shown the grid dependency arise from two sources. The first is due to unaccurate prediction of the droplet-gas relative velocity, and the second is that the probability of binary droplet collision is dependent on the grid resolution. In order to solve the grid dependency problem, the improved spray models are implemented in the KIVA-3V code in this study. For reducing the errors in predicting the relative velocity, the momentum gain from the gaseous phase to liquid particles were resolved according to the gas-jet theory. In addition, the advanced algorithm of the droplet collision modeling which surmounts the grid dependency problem was applied. Then, in order to validate the improved spray model, the computation is compared to the experimental results. By simultaneously regarding the momentum coupling and the droplet collision modeling, successful reduction of the numerical grid dependency could be accomplished in the simulation of the high-pressure injection diesel spray.

An Experimental Study of Film Cooling Characteristics at Supersonic Free Stream Conditions (초음속 주유동 환경에서의 막냉각 특성 시험 연구)

  • Kim, Manshik;Lee, Dong Min
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.45 no.4
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    • pp.342-348
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    • 2017
  • In this paper, film cooling characteristics at supersonic free stream conditions were examined experimentally by applying an IR-thermography. Film cooling experiments were carried out in a free-jet facility at Mach number of 3.0 and with unit Reynolds number of $42.53{\times}10^6$ and $69.35{\times}10^6$ using wedge shaped film cooling model which has a converging film cooling nozzle. Film cooling efficiency was calculated by measuring the surface temperature of PEEK(Polyether Ether Ketone) and the effects of angle of attack and blowing ratios on the film cooling efficiency were examined. The measured wall temperature was significantly reduced by the film cooling flow compared with the results without the film cooling flow. The usefulness of film cooling was also confirmed by the surface heat flux calculated using the surface temperature history of PEEK. As the blowing ratio increases the protected area of PEEK was also expanded along the direction of free stream and film cooling flow.