• Title/Summary/Keyword: Isolation Forest

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Distribution of Oligotrophic Actinomycetes in Forest Soil. (산림 토양 중 저 영양성 방선균의 분포)

  • Jeong, Eun-Ye;Lee, Sang-Hwa;Park, Dong-Jin;Lee, Hyang-Burm;Piao, Zhe;Kim, Chang-Jin
    • Microbiology and Biotechnology Letters
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    • v.28 no.4
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    • pp.239-241
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    • 2000
  • From 5 forest soil samples, the isolation frequency of oligotrophic Actinomycetes was investigated with nutrient and minimal media. The frequency of soil Actinomycetes by the minimal media. The frequency of soil Actinomycetes by the minimal media of DHV, WA, BA and NA was similar to the value by HV nutrient medium. In addition, different Actinomycetes were isolated from all the media used in this experiment and then their growth were tested on nutrient (Bennett's agar) and minimal media(WA). In consequent, the number of different Actinomycetes from minimal media was 26.1 strains, whereas the number of from nutrient medium (HV) was 26.6 strains. Furthermore, the percentage of facultative and obligate strains among the oligotrophic Actinomycetes was 90% and 10%, respectively.

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Isolation and HPLC-DAD validation of xanthoangelol in Lespedeza bicolor extract (싸리나무 추출물의 Xanthoangelol 분리 및 HPLC-DAD 밸리데이션)

  • Woo, Hyun Sim;Kim, Yeong-Su;Oh, Yu Jin;Cho, Hae Jin;Song, Se-Kyu;Kim, Dae Wook
    • Korean Journal of Food Science and Technology
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    • v.52 no.1
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    • pp.26-30
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    • 2020
  • This study was undertaken to determine the characteristics of xanthoangelol, the major chalcone constituent derived from the extracts of different parts of Lespedeza bicolor. Xanthoangelol was isolated from the root extract using column chromatography and used as a standard for quantitative analysis. The structure of the isolated compound was established based on spectroscopic evidence. The HPLC-DAD method was validated for specificity, linearity, precision, accuracy, limit of detection, and limit of quantitation. The calibration curve of xanthoangelol had significant linearity (R2>0.9999). Limit of detection and limit of quantitation 0.018 and 0.059 ㎍/mL, respectively. The relative standard deviation values of precision test, and intra- and inter-day tests were less than 0.22 and 0.40%, respectively. In the recovery test, the accuracy ranged from 98.98-102.78% with RSD values less than 0.13%. The method validation parameters indicate the applicability of the HPLC method for quality control of food or drug formulations containing L. bicolor.

Extraction of the Tree Regions in Forest Areas Using LIDAR Data and Ortho-image (라이다 자료와 정사영상을 이용한 산림지역의 수목영역추출)

  • Kim, Eui Myoung
    • Journal of Korean Society for Geospatial Information Science
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    • v.21 no.2
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    • pp.27-34
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    • 2013
  • Due to the increased interest in global warming, interest in forest resources aimed towards reducing greenhouse gases have subsequently increased. Thus far, data related to forest resources have been obtained, through the employment of aerial photographs or satellite images, by means of plotting. However, the use of imaging data is disadvantageous; merely, due to the fact that recorded measurements such as the height of trees, in dense forest areas, lack accuracy. Within such context, the authors of this study have presented a method of data processing in which an individual tree is isolated within forested areas through the use of LIDAR data and ortho-images. Such isolation resulted in the provision of more efficient and accurate data in regards to the height of trees. As for the data processing of LIDAR, the authors have generated a normalized digital surface model to extract tree points via local maxima filtering, and have additionally, with motives to extract forest areas, applied object oriented image classifications to the processing of data using ortho-images. The final tree point was then given a figure derived from the combination of LIDAR and ortho-images results. Based from an experiment conducted in the Yongin area, the authors have analyzed the merits and demerits of methods that either employ LIDAR data or ortho-images and have thereby obtained information of individual trees within forested areas by combining the two data; thus verifying the efficiency of the above presented method.

Forest Green Mold Disease Caused by Trichoderma pseudokoningii in Winter Mushroom, Flammulina velutipes (Trichoderma pseudokoningii에 의한 팽이버섯 푸른곰팡이병)

  • Choi, In-Young;Lee, Wang-Hyu;Choi, Joung-Sik
    • The Korean Journal of Mycology
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    • v.26 no.4 s.87
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    • pp.531-537
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    • 1998
  • Forest green mold incidence rate, extent of damage according to the inoculation periods, and its cultural characteristics were observed in the automatic cultural system of the winter mushroom, Flammulina velutipes. The incidence rate of the forest green mold was 7.7% in early cultivation stage and slowly increased to 14.9% in harvest stage. When the forest green mold was inoculated at cultural period, the rate was recorded at 100%, but the extent of the damage increased up to 40% (+++). There was also 100% incidence rate at early pinheading time, whereas the yield of mushroom decreased to ++ $(10{\sim}39%)$. The rate of forest green mold was greatly decreased to 34.4% at 10 days after pinheading, and its damage extent was also below 10%. A pathogen to infect the winter mushroom was identified as Trichoderma pseudokoningii. It's optimum temperature for mycelial growth is $25^{\circ}C$, and it grew 2.6 times faster than that of F. velutipes. The mycelial color of T. pseudokoningii was pale yellow or olivaceous in shades on PDA medium. Phialospore was one celled, and ellipsodal or obovoid, smooth walled, and measured $1.3{\sim}3.0{\times}1.0{\sim}2.5\;{\mu}m$. It aggregated in small heads at the tips of the phialides. The phialides were $3.2{\sim}9.2{\times}2.0{\sim}5.5\;{\mu}m$ and were of bowling pin type, solitary and alternate or more irregularly disposed at the conidiophore apex, T. pseudokoningii depressed the F. velutipes growth at the crossing cultivation when they were simultaneously. FV 4-1 (F. velutipes) cultivar was less depressed by T. pseudokoningii, but had a lower cross growth rate than the other four cultivars.

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Biocontrol of Blue Stain in Pine Wood with Lyophilized Mycelium of Ophiostoma quercus Albino Strain

  • Cho, Byung-Ju;Kim, Nam-Kyu;Cho, Nam-Seok;Lee, Jong-Kyu
    • The Plant Pathology Journal
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    • v.24 no.3
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    • pp.309-316
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    • 2008
  • Mycelium of Ophiostoma quercus albino strain cultured in liquid culture media was harvested, lyophilized, and stored for examining biocontrol efficacy against wood discoloration by staining fungi in the laboratory and field conditions. Dry weight of mycelium grown in brown sugar yeast extract broth(BYB) showed 3.8 times higher than that grown in potato dextrose broth(PDB). The optimum culture period in BYB was 4 weeks. In vitality test of the albino strain, the lyophilized mycelium stored in liquid nitrogen($-196^{\circ}C$) or in a refrigerator($4^{\circ}C$) kept the vitality until 13 months after storage; however, the mycelium stored at room temperature lost the vitality completely after 13 months. The mycelium stored in liquid nitrogen or in a refrigerator protected wood chips from the discoloration by pretreating mycelial suspension on pine wood chips. The mycelium stored at room temperature for 7 months also showed complete protection. These results suggest that the lyophilized mycelium have a biocontrol efficacy only if it keeps the least vitality. In the field conditions, both albino strain and $Woodguard^{(R)}$(commercial chemical protectant) showed significant differences(p=0.05) in discoloration rate as compared to the non-treated control when these were treated on the wood logs of Pinus rigida. The albino strain showed better protection than $Woodguard^{(R)}$. Isolation frequency of blue stain fungi from the chips of wood logs treated with the albino strain was 0% at three months after treatment, while that treated with $Woodguard^{(R)}$ was 76.7%. In another experiment, pre-treatment of mycelial suspension on the cut surface of wood logs also showed significant protection from wood discoloration. Spraying of both albino strain on the cut surface and insecticides on the bark also showed relatively good control effects as compared to insecticide alone on the bark or nontreated control.

Cellular Slime Molds in Forest Soils of Central Areas of Korea (중남부 삼림 지역에서의 세포성 점균의 출현과 분포)

  • 박미아;장남기
    • Asian Journal of Turfgrass Science
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    • v.10 no.3
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    • pp.213-230
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    • 1996
  • A study of occurrence and distribution of cellular slime molds(CSMs) in forest soils of central areas of Korea was carried out. Samples for CSMs isolation were collected from 4 study sites; Mt.Kyeryong, Mt. Taebaek, Mt. Sobaek and Mt. Sokri. In Mt. Kyeryong, six species were found. These were Dictyostelium fasciculatum, D.firmibasis, D. mucoroides, D. minutum, D. brefeldianum and Polysphondylium pallidum. The average number of species isolated at one site was 0.75, and average density(clones /g soil) was 292. The results of soil sample analyses were that the concentration of Pb was higher than any other areas. In Mt. Taebaek, seven species were found; D. fasciculatum, D.firmibasis, D. mucoroides, D. miuutum, P.pallidum. P. violaceum, P. candidum. The average number of species isolated at one site was 2.3,and average density was 1,108. Based on importance values calculated from study sites within each of three elevation ranges, several of the more widely distributed and abundant species have distribution patterns that show a response to elevation. In Mt. Sobaek, eleven species were found. These were D. fasciculatum. D.firmibasis, D. mucoroides, D. miuutum, D. brefeldianum, D. crassicaule,D. deminutivum, D. implicatum, P. pallidum. P. violaceum and P. candidum. The average number of species isolated at one site was 3, and average density was 793. Species diversity appeared to be the highest in this area. In Mt. Sokri, six species were found. These were D. fasciculatum. D. mucoroides, D. minutum, D. purpureum, P. pallidum. and P. violaceum. The average number of species isolated at one site was 2.4 and average density was 858. It was noticeable that D.purpureum were much more comrnonly found in this pinus evergreen forest. Key words: Cellular slime molds(CSMs), Importance value, Elevation, Average number of species, Average density.

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Application of Mycorrhizal Research to Agriculture and Forestry (균근연구(菌根硏究)의 농림업(農林業)에의 응용(應用))

  • Lee, Kyung Joon;Lee, Don Koo;Lee, Won Kyu;Koo, Chang Duck
    • Journal of Korean Society of Forest Science
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    • v.59 no.1
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    • pp.121-142
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    • 1983
  • Recently mycorrhizal research has been one of the most fast-growing research areas in modern plant science and microbiology. The application potential of mycorrhizal techniques to agriculture and forestry is enormous in view of the ubiquitous nature of mycorrhizae and known benefits of mycorrhizae to host plants. Unfortunately, very few scientists in Korea are currently involved in mycorrhizal research. When a team of American plant pathologists visited Korea in September 1982 to participate in the Korea-U.S.A. Joint Seminar on Forest Diseases and Insect Pests, they were surprised by the principal author's statement that there was no single research project on mycorrhizae sponsored by Korean government or any scientific institutions. The author initiated a few years ago a research project on the ecology of tree mycorrhizae with a foreign financial support. Major areas of interest were survey of ectomycorrhizae in relation to soil fertility, taxonomic distribution of mycorrhizae among woody plants, identification of ectomycorrhizal fungi, and growth response of woody plants to artificial inoculation. In spite of the enormous application potential of mycorrhizae to agronomic plants, the subject of mycorrhizae has not been recognized by Korean agronomists, foresters or pathologists. The purpose of this review rather written in Korean is to introduce the techniques of mycorrhizal research to Korean scientists and to urge them to participate in challenging new scientific field which might bring us a remarkable increase in crop productivity and tree growth through manipulation of this unique symbiosis. In this review, following topics were discussed in the same order: introduction; brief history of mycorrhizal research; morphology and classification of mycorrhizae; distribution of mycorrhizae in plant kingdom and in soil profile; physiology of mycorrhizae (functions, mineral nutrition, mycorrhizal formation); interaction of mycorrhizae with soil-born plant pathogens. mycorrhizae in nitrogen-fixing plants; application of mycorrhizal techniques to nursery practices (isolation, culture, inoculation, and response); prospect in the future.

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Restoration Model of Evergreen Broad-leaved Forests in Warm Temperate Region(II) - Vegetational Structure - (난대 기후대의 상록활엽수림 복원 모형(II) - 식생구조 -)

  • 오구균;김용식
    • Korean Journal of Environment and Ecology
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    • v.10 no.1
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    • pp.87-102
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    • 1996
  • To study vegetational structure of the Korean warm temperate region fifty two plots were surveyed in evergreen broad-leaved forests of southern islands. The vegetational structures among sites were dissimilar in virtue of geographical isolation and artificial disturbance. The surveyed plots were generally classified into three groups; the first, the group in which plant succession has proceeded naturally, the second, the group which was disturbed and managed for a long time, the third, the group which was afforested and has been succeeded into evergreen broad-leaved forest. The species with constancy over 80% in fifty two plots were Machilus thunbergii, Eurya japonica, Trachelospermum asiaticum var. intermidium, Cinnamomum japonicum, and Ligustrum japonicum. The community of Lozoste lancifolia, which is assumed to be a climax community of the Korean warm temperate region, remains in Chudo and Aedo. The secondary succession of seashore forest which were disturbed in the past will be done into Castanopsis cuspidata var. sieboldii

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Biological Control & Isolation of Chestnut Diseases by Colletotrichum Goeosporioides (밤나무 종실에 발생하는 탄저병균의 분리 및 친환경적 방제)

  • Kim, Young-Jae;Kang, Kil-Nam;Kim, Jong-Woo;Kim, Young-Myung;Lee, Sang-Hyeon;Hong, Suk-Il;Lee, Jae-Jun;Lee, Hyun-Su;Kim, Young-Kwon;Park, In-Seo;Cho, Yong-Gu
    • Korean Journal of Organic Agriculture
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    • v.21 no.4
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    • pp.725-736
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    • 2013
  • In order to acquire morphological characteristics and genetic characteristics of pathogen that causes anthrax to chestnut, anthrax was separate and identified in Gongju, chungnam chestnut plantation. Antagonistic microorganisms and plant extracts were selected for control of anthrax. Medium maturing variety treatment of 250 dilution fold in field was control at 71.2% and treatment of 500 dilution fold was control at 64.4% and treatment of 1000 dilution fold was control at 40.7%. Storage control value of Jabong in $25^{\circ}C$ after treatment in field is 61.7% at 250 dilution fold, 62.8% at 500 dilution fold, 40.9% at 1000 dilution fold treatment.

Isolation and Characterization of Extracellular Polymeric Substances (EPS)-producing bacteria for restoration of burnt forest soils (산불토양복원을 위한 Extracellular Polymeric Substances (EPS) 생성세균의 분리, 동정 및 특성에 관한 연구)

  • Lee, Gun-Young;Song, In-Geun;Chung, Jae-Chun;Kim, Young-Jun
    • Journal of the Korea Organic Resources Recycling Association
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    • v.12 no.4
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    • pp.139-147
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    • 2004
  • We have isolated two bacterial strains, FM-02 and AL-02, which produced EPS from forest soil for the restoration of forest fire by promoting soil aggregation. FM-02 was found to be Gram negative rod and belong to Beta Proteobacterium sp. through 16s-rDNA sequence analysis, and AL-02 was Gram positive rod and showed 81% of similarity to Zoogloea sp. through the analysis of 16s-rDNA sequence. FM-02 and AL-02 produced about 1.8g and 8.3g of EPS, respectively, per 1L of culture as dry weight. Flocculation activity (FA) was also measured in two strains. FM-02 showed 2.31 FA against active carbon, and AL-02 showed 6.21 FA against kaolin clay. From these results, we expect that AL-02 strain will be applied as a good biological material for the reduction of forest soil erosion by wild and rain after fire through promoting coagulation of soil particles.

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