• 제목/요약/키워드: Isolation Forest

검색결과 154건 처리시간 0.026초

A report of 42 unrecorded bacterial species belonging to the Alphaproteobacteria in Korea

  • Jin, Hyun Mi;Yoon, Jung-Hoon;Kim, Seung-Bum;Jahng, Kwang-Yeop;Cho, Jang-Cheon;Joh, Ki-seong;Cha, Chang-Jun;Seong, Chi-Nam;Bae, Jin-Woo;Im, Wan-Taek;Jeon, Che-Ok
    • Journal of Species Research
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    • 제5권2호
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    • pp.206-219
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    • 2016
  • As a subset study to discover indigenous prokaryotic species in Korea, a total of 42 bacterial strains assigned to the class Alphaproteobacteria were isolated from diverse environmental habitats including plant roots, ginseng soil, forest soil, marsh, mud flat, freshwater, and seawater. From the high 16S rRNA gene sequence similarity (>99.1%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to each independent and predefined bacterial species. There is no official report that these 42 species have been described in Korea; therefore 4 species of 1 genera in the order Caulobacterales, 18 species of 10 genera in the order Rhizobiales, 7 species of 5 genera in the order Sphingomonadales and 13 species of 11 genera in the order Rhodobacterales within the Alphaproteobacteria are reported for alphaproteobacterial species found in Korea. Gram reaction, colony and cell morphology, basic biochemical characteristics, isolation source, and strain IDs are also described in the species description section.

다양한 유기물을 분해하는 Bacillus subtilis CK-2의 분리 (Isolation of Bacillus subtilis CK-2 Hydrolysing Various Organic Materials)

  • 김철호;이상협
    • 생명과학회지
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    • 제21권12호
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    • pp.1716-1720
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    • 2011
  • 섬유소를 비롯한 단백질, 지질, 녹말을 분해할 수 있는 세균을 된장으로부터 분리하여 동정한 결과 Bacillus subtilis로 분류되었으며, Bacillus subtilis CK-2로 명명하였다. 분리균주는 $40\sim45^{\circ}C$의 비교적 넓은 온도 범위와 pH 6~9의 넓은 pH 범위, 그리고 NaCl 0~3% 범위에서 잘 자랐으며, 높은 자가분해효소 활성을 갖는 것을 알 수 있었다. B. subtilis CK-2가 분비하는 가수분해효소들은 대부분 세균의 생장과 거의 비례적으로 세포외 활성을 나타내는 1차 대사산물로 확인되었다. 이상의 결과로부터 B. subtilis CK-2는 농수임산물 폐기물이나 음식물 폐기물의 퇴비화, 사료 생산 등에 유용하게 이용될 수 있을 것으로 생각한다.

Isolation and Identification of Burkholderia pyrrocinia CH-67 to Control Tomato Leaf Mold and Damping-off on Crisphead Lettuce and Tomato

  • Lee, Kwang-Youll;Kong, Hyun-Gi;Choi, Ki-Hyuck;Lee, Seon-Woo;Moon, Byung-Ju
    • The Plant Pathology Journal
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    • 제27권1호
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    • pp.59-67
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    • 2011
  • A bacterial strain CH-67 which exhibits antagonism towards several plant pathogenic fungi such as Botrytis cinerea, Fulvia fulva, Rhizoctonia solani, Sclerotinia sclerotiorum, Colletotrichum sp. and Phytophthora sp. was isolated from forest soil by a chitin-baiting method. This strain was identified as Burkholderia cepacia complex (Bcc) and belonging to genomovar IX (Burkholderia pyrrocinia) by colony morphology, biochemical traits and molecular method like 16S rRNA and recA gene analysis. This strain was used to develop a bio-fungicide for the control of tomato leaf mold caused by Fulvia fulva. Various formulations of B. pyrrocinia CH-67 were prepared using fermentation cultures of the bacterium in rice oil medium. The result of pot experiments led to selection of the wettable powder formulation CH67-C containing modified starch as the best formulation for the control of tomato leaf mold. CH67-C, at 100-fold dilution, showed a control value of 85% against tomato leaf mold. Its disease control efficacy was not significantly different from that of the chemical fungicide triflumidazole. B. pyrrocinia CH-67 was also effective in controlling damping-off caused by Rhizoctonia solani PY-1 in crisphead lettuce and tomato plants. CH67-C formulation was recognized as a cell-free formulation since B. pyrrocinia CH-67 was all lethal during formulation process. This study provides an effective biocontrol formulation of biofungicide using B. pyrrocinia CH-67 to control tomato leaf mold and damping-off crisphead lettuce and tomato.

제재공장내 슬라임 발생원의 분리와 동정 (Isolation and Identification of the Origins Causing the Slime Found in Pulp and Paper Making Processes)

  • 오정수;조병묵;김은희
    • Journal of the Korean Wood Science and Technology
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    • 제25권3호
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    • pp.50-57
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    • 1997
  • The presence of slime in paper mills is practically universal. Many researches have been performed for many years to resolve the problem caused by the slime in pulp and paper mill. Many papers have been published to show the bacteria is a major cause of paper mill slime. Now that the recycling of the water has been increased and the regulations of a toxic chemical dosage have become more strengthen, the importance of the control of slime in pulp and paper mill recently has been more recognized. Therefore, to produce quality products at the lowest economic and environmental costs, a through study of the microbial ecology and the indentification of troublesome slime-forming bacteria is a quite necessary. The purpose of this paper is to indentify slime~forming bacteria isolated from the papermaking process. The samples were taken from four parts of making fine paper : machine chest, head box, wire part, white water tank. Machine chest showed the most numbers of bacteria, numbering $2.55{\times}10^7$. The different colony types were taken from the 105 dilution plate. Nine bacteria were identified u sing the Biolog system and the vitek system: 6 gram-negative bacteria, 3 gram-positive bacteria. They are Pseudomonas paucimobilis B., Staphylococcus sp., Acinetobacter calcoaceticus., Pseudomonas cepacia, Actinobaci1lus capsulatus, Acidovorax sp., Flavobacterium sp., and Staphylococcus auricularis in addition to one unidentified sp., Among them. Pseudomonas paucimobillis was found in all places where the samples were taken. And, each parts had the different predominant bacteria in it : Pseudomonas paucimobilis B. in machine chest, Acinetobactor calcoaceticus. in Wire Part and Staphylococcus sp. in head box.

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계방산, 오대산 및 지리산 야생 표고균주의 유전적 변이 (Genetic Variation of the Wild Strains of Lentinula edodes in Three Mountains of Korea)

  • 김둘이;박원철
    • 한국균학회지
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    • 제29권2호
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    • pp.99-103
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    • 2001
  • RAPD 검정법을 이용하여, 우리 나라에 자생하고 있는 야생 표고균주의 지역간 유전변이에 관해 분석하였다. 사용된 야생 표고균주는 계방산 수집 10개, 오대산 수집 11개, 지리산 수집 11개의 야생 표고 총 32균주를 사용하였다. Genomic DNA를 추출하여 10개의 random primer를 사용하여 PCR 증폭시킨 후 전기영동 한 결과 170개의 밴드가 관찰되었으며, 그중 다형성 밴드는 161개가 검출되었다. 이들 전기영동 상에 나타난 밴드의 유무(1,0)로 cluster 분석을 한 결과, 계방산과 오대산 표고균주들이 하나의 그룹으로, 나머지 지리산 표고균주들이 다른 하나의 그룹으로 형성되었다. 또한 AMOVA 분석결과 세 지역의 집단간 유전적인 차이는 12.5%를 나타내었고, 각 균주들 간에는 87.5%임을 알 수 있었다. 이러한 결과는 계방산과 오대산 균주들은 그룹 내 분화가 큰 것이 주요 원인일 것으로 생각되며, 반면, 지리산 균주들은 계방산과 오대산과는 유전적 격리가 존재함을 알 수 있었다.

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백출 추출물의 암세포증식 저해 효과 (Inhibitory Effects of the Rhizome Extract of Atractylodes japonica on the Proliferation of Human Tumor Cell Lines)

  • 이성옥;서지희;이정원;유미영;권지웅;최상운;강종성;권대영;김영균;김영섭;유시용
    • 생약학회지
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    • 제36권3호통권142호
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    • pp.201-204
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    • 2005
  • The rhizome extract of Atractylodes japonica Koidzumi(Compositae) exhibited a particular inhibition on the proliferation of cultured human tumor cell lines, in vitro. Thus, the intensive phytichemical investigation of the MeOH extract of Atractylodes japonica have been conducted by the way of activity-guided purification. The repeated column chromatographic separation of the n-hexane soluble part of extract resulted in the isolation of four sesquiterpenes (1-4) and a polyacetylene component (5). Chemical structures of them were identified as atractylon (1), atractylenolide Ⅰ(2), atractylenolide Ⅲ(3), eudesma-4(15),7(11)-dien-8-one (4) and 1,3-diacetyl-atractylodiol (5) by spectroscopic means. Among the isolates, compound 2-4 were shown to give moderate inhibitory effect in a dose dependent manner on the proliferation of cultured human tumor cell lines such as A549 (non small cell lung), SK-OV-3 (ovary), SK-MEL-2 (melanoma), XF498 (central nerve system) and HCT 15(colon), respectively.

육두구 추출물의 암세포증식 저해 효과 (Inhibitory Effects of the Seed Extract of Myristica fragrans on the Proliferation of Human Tumor Cell Lines)

  • 이정원;이성옥;서지희;유미영;권지웅;최상운;이강노;권대영;김영균;김영섭;유시용
    • 생약학회지
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    • 제36권3호통권142호
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    • pp.240-244
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    • 2005
  • The methanol extract of the seed of Myristica fragrans (myristicaceae) demonstrated a potent inhibition on the proliferation of cultured human tumor cells such as A549 (non small cell lung), SK-OV-3 (ovary), SK-MEL-2(melanoma), XF498 (central nerve system) and HCT-15(colon). The MeOH extract was fractionated into three portions by serial solvent partition i,e., EtOAc soluble part, BuOH soluble part and remaining water layer. Among them, the EtOAc soluble part of the extract demonstrated a potent inhibition on the proliferation of cultured human tumor cells, Bioassay-guided fractionation of the EtOAc soluble part led to the isolation of six lignan constituents, i.e., safrole(1), machilin A (2), licarin B (3), macelignan (4), mesodihydroguaiaretic acid (5) and myristargenol A (6) as well as a large amount of myristic acid as active ingredients. Structures of the isolated active components (1-6) were established by chemical and spectroscopic means.

Traditional Unani Medicine in Flu-like Epidemics and COVID-19 during Pregnancy: A Literary Research

  • Sultana, Arshiya;Khanam, Marhaba;Rahman, Khaleequr;Sumbul, Sumbul
    • 셀메드
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    • 제11권4호
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    • pp.20.1-20.23
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    • 2021
  • Background: The pandemic COVID-19 caused by a novel coronavirus SARS-COV-2 has spread like a forest fire. This disease may have serious consequences for pregnant women. Presently, no specific drugs or vaccines exist to battle this disease and researches are underway. Unani medicine has a unique role in prevention and management during epidemics. Here, we reviewed the overview of COVID-19 infection and pregnancy, concept and practices in Unani medicine for flu-like epidemics in general and pregnancy, and safety of Unani drugs for the prevention and treatment of mild symptomatic cases of COVID-19 during pregnancy. Methodology: Unani classical texts and pharmacopoeia were meticulously explored for concepts and practices for flu-like epidemic diseases. Further, we browsed scientific databases such as PubMed, Scopus and others for an overview, epidemics and Unani medicine, effectiveness and safety of Unani drugs in COVID-19 and pregnancy. Results: Unani medicine includes prevention and management of flu-like epidemic include quarantine and isolation, aromatic herbal drugs fumigation and spraying for environmental disinfection, ilaj bid tadbir for health promotion and use of health-protecting drugs and symptom-specific drugs in general and related to pregnancy. Lahsun, asalussus, behidana, banafsha, zanjabeel, unnab, etc are in use since antiquity for the prevention and treatment of asymptomatic and mildly symptomatic pregnant women during infectious and epidemic diseases. Conclusion: Currently, the aforementioned plants are proven for antiviral, antioxidant, immunomodulatory and anti-inflammatory activities, probably useful in the COVID-19 pandemic. Additionally, scientific studies have provided new insight into the mechanism underlying the therapeutic effect of Unani medicines that are safe in pregnancy.

느릅나무 근피의 화학조성분 및 항균성 물질(I) : 화학조성분 및 추출성분의 항균성 (Chemical Analysis and Isolation of Antibacterial Compound from Ulmus species(I) : Chemical Analysis and Antibacterial Activity of Extractives)

  • 김창순;이중명;최장옥;박성배;엄태진
    • Journal of the Korean Wood Science and Technology
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    • 제30권4호
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    • pp.66-73
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    • 2002
  • 느릅나무 근피와 점액질의 화학 조성을 분석하였고, 근피의 MeOH추출물을 각종 유기용제 및 수층으로 분획하고 각 분획물의 항균성을 조사하였다. 원소조성은 수종간의 차이는 없었지만, 목부의 질소 및 리그닌 함량은 사부보다 높았으며 회분 및 추출물양은 목부보다 사부가 높게 나타났다. 근피의 점액질은 냉수에 의해 매우 느리게 용출 되었으며, 높은 산성당 함량을 갖는 pectin 유사 물질이었다. 느릅나무 근피로부터 약 7% 정도의 메탄올 추출물이 얻어졌고 이 중 78%가 수용성 물질이었으며 Staphylococcus aureus와 Salmonella typhimurium에 대하여 항균성을 나타내었다.

기후변화적응형 도시림 조성을 위한 i-Tree Canopy 기반 의사결정지원 방안 (i-Tree Canopy-based Decision Support Method for Establishing Climate Change Adaptive Urban Forests)

  • 김태한;이재영;송창길;오지은
    • 반도체디스플레이기술학회지
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    • 제23권1호
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    • pp.12-18
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    • 2024
  • The accelerated pace of climate crisis due to continuous industrialization and greenhouse gas emissions necessitates sustainable solutions that simultaneously address mitigation and adaptation to climate change. Naturebased Solutions (NbS) have gained prominence as viable approaches, with Green Infrastructure being a representative NbS. Green Infrastructure involves securing green spaces within urban areas, providing diverse climate adaptation functions such as removal of various air pollutants, carbon sequestration, and isolation. The proliferation of Green Infrastructure is influenced by the quantification of improvement effects related to various projects. To support decision-making by assessing the climate vulnerability of Green Infrastructure, the U.S. Department of Agriculture (USDA) has developed i-Tree Tools. This study proposes a comprehensive evaluation approach for climate change adaptation types by quantifying the climate adaptation performance of urban Green Infrastructure. Using i-Tree Canopy, the analysis focuses on five urban green spaces covering more than 30 hectares, considering the tree ratio relative to the total area. The evaluation encompasses aspects of thermal environment, aquatic environment, and atmospheric environment to assess the overall eco-friendliness in terms of climate change adaptation. The results indicate that an increase in the tree ratio correlates with improved eco-friendliness in terms of thermal, aquatic, and atmospheric environments. In particular, it is necessary to prioritize consideration of the water environment sector in order to realize climate change adaptive green infrastructure, such as increasing green space in urban areas, as it has been confirmed that four out of five target sites are specialized in improving the water environment.

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