• Asian-Australasian Journal of Animal Sciences
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• 제20권5호
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• pp.615-621
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• 2007

AMP-activated protein kinase alpha 2 (PRKAA2) plays a key role in regulation of fatty acid and cholesterol metabolism. This study investigated the porcine PRKAA2 gene as a positional candidate for intramuscular fat and backfat thickness traits in pig chromosome 6. A partial fragment of the porcine PRKAA2 gene, amplified by PCR, contained a putative intron 3 including a part of exon 3 and 4, comparable with that of human PRKAA2 gene. Within the fragment, several single nucleotide polymorphisms were identified using multiple sequence alignments. Of these, TaqI restriction enzyme polymorphism was used for genotyping various pig breeds including Korean reference family. Using linkage and physical mapping, the porcine PRKAA2 gene was mapped in the region between microsatellite markers SW1881 and SW1680 on chromosome 6. Allele frequencies were quite different among pig breeds. The full length cDNA of the porcine PRKAA2 (2,145 bp) obtained by RACE containing 1,656 bp open reading frame of deduced 552 amino acids, had sequence identities with PRKAA2 of human (98.2%), rat (97.8%), and mouse (97.5%). These results suggested that the porcine PRKAA2 is a positional candidate gene for fat deposition trait at near telomeric region of the long arm of SSC 6.

• Animal Bioscience
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• 제34권8호
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• pp.1309-1320
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• 2021

Objective: Investigation of muscle growth at different developmental stages is an appropriate strategy for studying the mechanisms underlying muscle development and differences in phenotypes. In particular, the muscle development mechanisms and the difference between the fastest and slowest growth rates. Methods: In this study, we used a growth curve model to fit the growth inflection point (IP) of QingYu pigs and compared differences in the long non-coding RNA (lncRNA) transcriptome of muscle both at the growth IP and plateau phase (PP). Results: The growth curve of the QingYu pig had a good fit (R² = 0.974) relative to a typical S-curve and reached the IP at day 177.96. At the PP, marbling, intramuscular fat, and monounsaturated fatty acids had increased significantly and the percentage of lean muscle and polyunsaturated fatty acids had decreased. A total of 1,199 mRNAs and 62 lncRNAs were differentially expressed at the IP compared with the PP. Additional to gene ontology and Kyoto encyclopedia of genes and genomes pathway analyses, these differentially expressed protein coding genes were principally related to muscle growth and lipid metabolism. Conclusion: Our results suggest that the identified differentially expressed lncRNAs, could play roles in muscle growth, fat deposition and regulation of fatty acid composition at the IP and PP.

• Animal Bioscience
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• 제35권2호
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• pp.155-165
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• 2022

Objective: This study was performed to examine whether the porcine glutamic-oxaloacetic transaminase 1 (GOT1) gene has important functions in regulating adipocyte differentiation. Methods: Porcine GOT1 knockout and overexpression vectors were constructed and transfected into the mouse adipogenic 3T3-L1 cells. Lipid droplets levels were measured after 8 days of differentiation. The mechanisms through which GOT1 participated in lipid deposition were examined by measuring the expression of malate dehydrogenase 1 (MDH1) and malic enzyme (ME1) and the cellular nicotinamide adenine dinucleotide phosphate (NADPH) content. Results: GOT1 knockout significantly decreased lipid deposition in the 3T3-L1 cells (p<0.01), whereas GOT1 overexpression significantly increased lipid accumulation (p<0.01). At the same time, GOT1 knockout significantly decreased the NADPH content and the expression of MDH1 and ME1 in the 3T3-L1 cells. Overexpression of GOT1 significantly increased the NADPH content and the expression of MDH1 and ME1, suggesting that GOT1 regulated adipocyte differentiation by altering the NADPH content. Conclusion: The results preliminarily revealed the effector mechanisms of GOT1 in regulating adipose differentiation. Thus, a theoretical basis is provided for improving the quality of pork and studies on diseases associated with lipid metabolism.

• Asian-Australasian Journal of Animal Sciences
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• 제28권8호
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• pp.1075-1083
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• 2015

Adipose tissue deposited within muscle fibers, known as intramuscular fat (IMF or marbling), is a major determinant of meat quality and thereby affects its economic value. The biological mechanisms that determine IMF content are therefore of interest. In this study, 48 genes involved in the bovine peroxisome proliferator-activated receptor signaling pathway, which is involved in lipid metabolism, were investigated to identify candidate genes associated with IMF in the longissimus dorsi of Hanwoo (Korean cattle). Ten genes, retinoid X receptor alpha, peroxisome proliferator-activated receptor gamma (PPARG), phospholipid transfer protein, stearoyl-CoA desaturase, nuclear receptor subfamily 1 group H member 3, fatty acid binding protein 3 (FABP3), carnitine palmitoyltransferase II, acyl-Coenzyme A dehydrogenase long chain (ACADL), acyl-Coenzyme A oxidase 2 branched chain, and fatty acid binding protein 4, showed significant effects with regard to IMF and were differentially expressed between the low- and high-marbled groups (p<0.05). Analysis of the gene co-expression network based on Pearson's correlation coefficients identified 10 up-regulated genes in the high-marbled group that formed a major cluster. Among these genes, the PPARG-FABP4 gene pair exhibited the strongest correlation in the network. Glycerol kinase was found to play a role in mediating activation of the differentially expressed genes. We categorized the 10 significantly differentially expressed genes into the corresponding downstream pathways and investigated the direct interactive relationships among these genes. We suggest that fatty acid oxidation is the major downstream pathway affecting IMF content. The PPARG/RXRA complex triggers activation of target genes involved in fatty acid oxidation resulting in increased triglyceride formation by ATP production. Our findings highlight candidate genes associated with the IMF content of the loin muscle of Korean cattle and provide insight into the biological mechanisms that determine adipose deposition within muscle.

• Asian-Australasian Journal of Animal Sciences
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• 제19권10호
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• pp.1514-1518
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• 2006

English crossbred steers (n = 32) and heifers (n = 32) were fed a corn-based finishing diet and supplemented with 2% Ascophyllum nodosum on a DM basis to for various feeding stages of the 119 d feeding period determine the supplementation strategy that maximized intramuscular fat deposition as determined by quality grade. All cattle were implanted with Ralgro$^{(R)}$ on d 36 of the trial and re-implanted with Revalor-S$^{(R)}$ or Revalor-H$^{(R)}$ on d 92. Cattle were blocked by sex and divided into one control and three treatment groups receiving Ascophyllum nodosum. Treatment 1 (trt 1) received Ascophyllum nodosum from d 36 to 50 of the feeding period, trt 2 received Ascophyllum nodosum for the last 14 d of the feeding period, and trt 3 which received Ascophyllum nodosum for both d 36-50 and the last 14 d of the feeding period. Cattle were weighted initially ($385{\pm}4.53kg$) and every 28 d following until they reach an average BW of $554{\pm}7.46kg$. No effect for Ascophyllum nodosum supplementation was found on measured performance characteristics. All treatment groups supplemented with Ascophyllum nodosum had higher actual marbling scores (p<0.05) than controls. Trt 1 was found to have a highest marbling score (572.5; p<0.05), whereas the control group having the lowest marbling score (473.8). Trt 1 had a higher quality grade (5.25; p<0.05) than the control (3.94) group, but did not differ from trt 2 (4.56; p = 0.105) and trt 3 (4.75; p = 0.236) where high Select = 4, and low Choice = 5. Trt 2 did not differ from trt 3 (p = 0.655), or the control group (p = 0.140) for quality grade. However, trt 3 did tend to differ (p = 0.057) from the control group for quality grade. Control group animals graded 25% Choice, 62.5% Select; trt 1 graded 75% Choice, 18.8% Select; trt 2 graded 62.5% Choice, 25% Select and trt 3 graded 56.3% Choice and 31.2% Select. Overall, treatment groups had a 39.6% increase in Choice quality grade and a 37.5% decrease in Select quality grade when compared to the control animals.

• Journal of Animal Science and Technology
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• 제48권3호
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• pp.345-352
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• 2006

지방합성이 왕성하게 진행되는 비육후기의 근육내 지방합성에 있어서, 지방산 및 당의 이용경로 및 이에 따른 근육내 지방합성과정을 규명하기 위해서 지방산 및 당 운반 유전자인 FABP4, GLUT4와 근육내 지방대사 주요유전자인 ACL, ACC, LPL 및 SCD 유전자의 mRNA 발현양상을 분석하였다. 한우 비육전기 및 후기 각 3두를 공시하여 total RNA 추출 및 1st cDNA 합성하여 SYBR green을 이용하여 real-time PCR 분석을 각 유전자별로 3반복씩 수행하였다. FABP4 유전자는 비육전기에 비해 비육후기에 있어서, 3배 이상 유전자 발현이 증가함을 확인할 수 있었고, GLUT4 유전자는 비육전기 및 비육후기에서 큰 차이를 보이지 않았다. 또한 근육내 지방합성 주요유전자인 ACL, ACC, LPL 및 SCD 유전자의 발현량은 비육후기에서 ACL 유전자가 3.8배, ACC 유전자는 2.7배, LPL 유전자는 3.5배, 그리고 SCD 유전자는 7.5배 발현량이 증가하였다. 따라서 본 연구를 통하여 한우의 비육후기에서 근육내 지방합성은 FABP4에 의한 지방산 유입의 증가와 더불어 ACL 유전자에 의해서 지방산 합성의 중간대사물인 acetyl-CoA가 합성되고, 이 중간 대사물을 이용하여 ACC 및 SCD 유전자에 의해서 긴 사슬 지방산 합성이 왕성하게 일어남을 알 수 있었다.

• Journal of Animal Science and Technology
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• 제45권5호
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• pp.703-710
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• 2003

본 연구는 재래돼지와 랜드레이스를 기초축으로 이용한 F$_2$ 241두에 대해 Heart Fatty Acid- Binding Protein 유전자와 연관되어 있는 PCR- RFLP를 이용하여 그 다형성을 조사하고 돼지의 성장형질, 도체형질, 육질형질과 그 유전자형간의 연관성을 구명코자 실시하였다. H-FABP PCR-RFLP는 두 쌍의 primer에 의한 850bp와 700bp의 증폭산물을 HaeⅢ와 HinfⅠ제한효소를 사용하여 실시되었다. HaeⅢ을 이용한 PCR-RFLP 유전자형은 DD형/700+150bp, Dd형/700+400+300+ 150bp 그리고 dd형/400+300+150bp의 DNA 단편을 보였으며, Hinf1에 의한 유전자형은 HH형은 350+180+130bp, Hh형은 350+220+180+130bp, hh형/350+220+130bp의 절단된 DNA 단편을 보였다. H-FABP/HaeⅢ 유전자형 중에서 12주령 체중은 DD형에 비해 Dd와 dd형에서 유의적으로 높은 값을 보였으며(p〈0.001), 3주령 체중 (p〈0.01)과 5주령, 30주령 체중 (p〈0.05)에 경우도 Dd와 dd형에서 유의적으로 높게 관찰되었고(Table 3), 특히 ‘d’ 대립유전자가 체중과 연관성이 있음이 관찰되었다. H-FABP/HinfⅠ의 유전자형과 표현형질의 연관성을 보면 12주령, 30주령 체중 및 도체지방 과 등지방 두께에서는 hh형에 비해 HH와 Hh형에서 유의적으로 높게 나타났으며(p〈0.001), 5주령 체중과 근내지방 함량에서도 HH형에서 유의적으로 높게 관찰되었고(p〈0.05), 특히 ‘H’ 대립유전자가 체중과 도체지방, 등지방 두께 및 근내지방 함량과 연관성이 있음이 관찰되었다. 따라서 돼지성장 및 지방축적과 관련한 선발력을 높이기 위해 H- FABP PCR-RFLP(HaeⅢ & HinfⅠ)를 분자생물학적 marker로 사용할 수 있을 것으로 사료된다.

• Asian-Australasian Journal of Animal Sciences
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• 제22권7호
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• pp.943-954
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• 2009

Diacylglycerol acyltransferase (DGAT) is a key enzyme that catalyzes the final and rate-limiting step of triglyceride synthesis. Both DGAT1 and DGAT2 genes code proteins with DGAT activity. Studies have shown DGAT1 polymorphisms associate with intramuscular fat deposition in beef cattle, but fewer associations between DGAT2 and beef cattle economic traits have been reported. The objective of this study was to investigate single nucleotide polymorphism (SNP) in intron3 of bovine DGAT2 and evaluate the associations of that with carcass, meat quality, and fat yield traits. Test animals were 157 commercial feedlot steers belonging to 3 Chinese native breeds (22 for Luxi, 24 for Jinnan, and 23 for Qinchuan), 3 cross populations (20 for Charolais${\times}$Fuzhou, 18 for Limousin ${\times}$Luxi, and 17 for Simmental${\times}$Jinan) and 1 Taurus pure breed population (16 Angus steers). In the current study, 15 SNP were discovered in intron3 and exon4 of DGAT2 at positions 65, 128, 178, 210, 241, 255, 270, 312, 328, 334, 365, 366, 371, 415, and 437 (named as their positions in PCR amplified fragments). Only 7 of them (128, 178, 241, 270, 312, 328, and 371) were analyzed, because SNP in three groups (65-128-255, 178-210-365 and 241-334-366) were in complete linkage disequilibrium within the group, and SNP 415 was a deletion and 437 was a null mutation. Frequencies for rare alleles in the 3 native breed populations were higher than in the 3 cross populations for 178 (p = 0.04), 270 (p = 0.001), 312 (p = 0.03) and 371 (p = 0.002). A general linear model was used to evaluate the associations between either SNP genotypes or allele substitutions and the measured traits. Results showed that SNP 270 had a significant association with the fat yield associated with kidney, pelvic cavity, heart, intestine, and stomach (KPHISY). Animals with genotype CC and CT for 270 had less (CC: -7.71${\pm}$3.3 kg and CT: -5.34${\pm}$2.5 kg) KPHISY than animals with genotype TT (p = 0.02). Allele C for 270 was associated with an increase of -4.26${\pm}$1.52 kg KPHISY (p = 0.006) and $-0.92{\pm}0.45%$ of retail cuts weight percentage (NMP, Retail cuts weight/slaughter body weight) (p = 0.045); allele G for 312 was associated with an increase of -5.45${\pm}$2.41 kg KPHISY (p = 0.026). An initial conclusion was that associations do exist between DGAT2 gene and carcass fat traits. Because of the small sample size of this study, it is proposed that further effort is required to validate these findings in larger populations.

• Journal of Animal Science and Technology
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• 제50권3호
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• pp.293-300
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• 2008

비육 기간 중 근육 내 지방 축적 및 관련 유전자 발현 양상을 확인하기 위하여, 등심 내 지방 및 중성지방 함량을 측정하고 중성지방 생합성 관련 유전자인 ACSS2, GPAT, MGAT 및 DGAT의 유전자 발현량을 real-time PCR법을 통하여 분석하였다. 근육 내 중성지방 함량은 20개월령 이후 급속히 증가됨을 보였고, 중성지방 함량의 증가와 함께 ACSS2, GPAT 및 DGAT 유전자의 발현이 증가됨을 확인하였다. 특히, 12개월령과 비교하여 ACSS2 유전자의 발현은 비육후기인 27개월령에서 7.3배, GPAT는 6.9배 증가되었다. 이러한 중성지방 함량의 증가와 중성지방 생합성 관련 유전자의 발현량 증가는 비육후기에 있어 고 에너지 사료 급여로 인한 지방산의 증가와, 증가된 지방산의 이용성 증대로 축적 형태인 중성지방 합성이 증가되는 것으로 판단되어 진다. 또한 중성지방 생합성 관련 유전자인 ACSS2, GPAT 및 DGAT 유전자의 발현증가는 근육 내 지방 축적과 밀접히 관련되어 있으며, 근내지방 축적과 관련되어 주요한 후보 유전자로 생각되어 진다.

• Journal of Animal Science and Technology
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• 제48권1호
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• pp.21-28
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• 2006

지방세포 내에서 자유 지방산과의 결합수송과 근내지방의 축적에 핵심적인 역할을 담당하는 지방세포 지방산결합단백질 유전자(A-FABP)의 promoter 영역에서 다형성(T-406C)를 SSCP에 이은 DNA 염기서열 분석을 통해 돼지 Duroc 품종에서 확인하였다. 이 돌연변이 406C는 전사인자 nuclear factor 1의 결합 활성을 변화시킬 수 있는 돌연변이로 확인되었다. Duroc 집단에서 HinfⅠ-RFLP 방법으로 유전자형을 결정한 결과 세 종류(TT, TC, CC)의 유전자형을 확인하였고, 빈도는 각각 42.3, 44.3, 13.4%로 확인되었다. 발견된 유전자형과 성장형질간의 상관관계를 통계적으로 유의성을 분석했을 때, 406C/ (TC와 CC)인 돼지의 20주령 체중이 TT인 돼지에서보다 더 무거운 양상을 보이며 유의한 차이를 보였고(P<0.05), 생시체중, 3주령, 10주령 체중에서는 유의한 차이가 발견되지 않았다. 동형접합인 406C/C 돼지들은 406T/인 돼지들에 비해 일당증체량, 90kg 도달일령, 사료효율 면에서 유의적인 차이를 나타내었다. 또한, 등지방두께의 변화와는 무관하게 등심단면적과 정육률에서 유의적인 차이를 확인하였고, CC 동형접합인 돼지에서 더 높은 수치를 나타내었다(P<0.05). 이상의 결과들을 토대로, A-FABP 유전자의 promoter 상에서 발견된 돌연변이인 T-406C는 생육 후반기에서 체중과 등심단면적의 증가에 중요한 역할을 담당하고 있다고 사료되며, 생육 후기 근내지방의 축적과 관련되어 있는 것으로 사료된다. 본 연구에서 발견한 유전자의 다형성은 Duroc 품종의 육종을 위한 분자 marker로서 유용하게 이용될 것으로 사료된다.