• 제목/요약/키워드: Interval Mapping

검색결과 140건 처리시간 0.03초

실시간 GPS/INS 시스템을 이용한 웹기반 모바일 매핑시스템 연구 (A Study on Web-based Mobile Mapping System Using Real-Time GPS/INS System)

  • 이종기;김병국;권재현
    • Spatial Information Research
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    • 제11권3호
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    • pp.291-299
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    • 2003
  • 모바일 매핑시스템은 차량에 CCD카메라와 위치측정장비(GPS/INS, Odometer 등)를 장착하고 도로에서 일정한 거리 또는 시간간격으로 지리 정보 데이터를 획득하는 이동 정보취득 시스템이다. 이러한 모바일 매핑시스템으로부터의 자료가 실시간으로 사용자에게 전달되면, 사용자는 이동국의 위치 및 지리정보 상황을 쉽게 파악할 수 있는 장점이 있다. 실시간 위치정보 제공의 방법은 PDA, 무선모뎀, 핸드폰 그리고 웹 등 여러 가지가 있을 수 있으나, 안정적이고 효율적이며, 경제적인 방법으로 웹을 통한 전송을 생각할 수 있다. 웹을 이용한 실시간 지리정보 전송을 위해서는 먼저 실시간 위치측정이 가능한 모바일 매핑시스템을 이용하여 지리정보를 취득하고 이를 웹을 통하여 전송할 수 있는 플랫폼이 필요하다. 본 연구에서는 실시간 위치정보를 취득할 수 있는 GPS/INS 시스템을 이용하여 데이터를 취득한 후 사용자가 모바일 매핑시스템의 실시간 위치정보를 확인할 수 있도록 웹으로 전송하는 플랫폼을 연구하였다.

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Mapping Quantitative Trait Loci Associated with Arsenic Toxicity Stress in a Double Haploid Population of Rice (Oryza sativa L.)

  • Saleem Asif;Rahmatullah Jan;Kyung-Min Kim
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2022년도 추계학술대회
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    • pp.282-282
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    • 2022
  • Arsenic (As) is a toxic heavy metal that affects the major rice-growing regions of the world and can cause cancer in humans. Rice paddy fields in South Asia are mostly dependent on arsenic-contaminated water sources due to which rice takes up the arsenic from the soil through roots and accumulates it in plant different parts. Here, we present a quantitative trait locus (QTL) mapping study to find out candidate genes conferring As toxicity tolerance in rice (Oryza sativa L.) at the seedling stage. Three weeks old, 120 double haploid CNDH lines derived from a cross between the Indica variety Cheongcheong and the Japonica variety Nagdong and their parental lines were used by treating with 25 μM As. After 2 weeks ofAs stress, 5 traits such as; shoot length (SL), root length (RL), shoot fresh weight (SFW), root fresh weight (RFW), and chlorophyll contents (CHC) were measured. A linkage map of 12 rice chromosomes was constructed from genotypic data DH lines using 778 SSR markers. The linkage map covered a total genetic distance of 2121.7 cM of the rice genome with an average interval of 10.6 cM between markers. A total of seventeen QTLs (LOD>2) were mapped on chromosomes 1, 2, 3, 6, 7, 8, 9, 11, and 12 using composite interval mapping with trait-increasing alleles coming from both parents. Five QTLs for SL, Two QTLs for RL, Five QTLs for SHL, Three QTLs for RFW, and Two QTLs for CHC were detected. The QTLs related to CHC were selected for forther study.

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Evaluating LIMU System Quality with Interval Evidence and Input Uncertainty

  • Xiangyi Zhou;Zhijie Zhou;Xiaoxia Han;Zhichao Ming;Yanshan Bian
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제17권11호
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    • pp.2945-2965
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    • 2023
  • The laser inertial measurement unit is a precision device widely used in rocket navigation system and other equipment, and its quality is directly related to navigation accuracy. In the quality evaluation of laser inertial measurement unit, there is inevitably uncertainty in the index input information. First, the input numerical information is in interval form. Second, the index input grade and the quality evaluation result grade are given according to different national standards. So, it is a key step to transform the interval information input by the index into the data form consistent with the evaluation result grade. In the case of uncertain input, this paper puts forward a method based on probability distribution to solve the problem of asymmetry between the reference grade given by the index and the evaluation result grade when evaluating the quality of laser inertial measurement unit. By mapping the numerical relationship between the designated reference level and the evaluation reference level of the index information under different distributions, the index evidence symmetrical with the evaluation reference level is given. After the uncertain input information is transformed into evidence of interval degree distribution by this method, the information fusion of interval degree distribution evidence is carried out by interval evidential reasoning algorithm, and the evaluation result is obtained by projection covariance matrix adaptive evolution strategy optimization. Taking a five-meter redundant laser inertial measurement unit as an example, the applicability and effectiveness of this method are verified.

AT LEAST TWO SOLUTIONS FOR THE SEMILINEAR BIHARMONIC BOUNDARY VALUE PROBLEM

  • Jung, Tacksun;Choiy, Q-Heung
    • Korean Journal of Mathematics
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    • 제22권4호
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    • pp.633-644
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    • 2014
  • We get one theorem that there exists a unique solution for the fourth order semilinear elliptic Dirichlet boundary value problem when the number 0 and the coefficient of the semilinear part belong to the same open interval made by two successive eigenvalues of the fourth order elliptic eigenvalue problem. We prove this result by the contraction mapping principle. We also get another theorem that there exist at least two solutions when there exist n eigenvalues of the fourth order elliptic eigenvalue problem between the coefficient of the semilinear part and the number 0. We prove this result by the critical point theory and the variation of linking method.

Fast, Flexible Text Search Using Genomic Short-Read Mapping Model

  • Kim, Sung-Hwan;Cho, Hwan-Gue
    • ETRI Journal
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    • 제38권3호
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    • pp.518-528
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    • 2016
  • The searching of an extensive document database for documents that are locally similar to a given query document, and the subsequent detection of similar regions between such documents, is considered as an essential task in the fields of information retrieval and data management. In this paper, we present a framework for such a task. The proposed framework employs the method of short-read mapping, which is used in bioinformatics to reveal similarities between genomic sequences. In this paper, documents are considered biological objects; consequently, edit operations between locally similar documents are viewed as an evolutionary process. Accordingly, we are able to apply the method of evolution tracing in the detection of similar regions between documents. In addition, we propose heuristic methods to address issues associated with the different stages of the proposed framework, for example, a frequency-based fragment ordering method and a locality-aware interval aggregation method. Extensive experiments covering various scenarios related to the search of an extensive document database for documents that are locally similar to a given query document are considered, and the results indicate that the proposed framework outperforms existing methods.

Genetic Mapping of Resistant Genes in Brassica pekinensis Against Plasmodiophora brassicae Race 6

  • Lee, Gung-Pyo;Baek, Nam-Kwon;Park, Kuen-Woo
    • The Plant Pathology Journal
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    • 제18권5호
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    • pp.266-270
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    • 2002
  • Inbred lines of Chinese cabbage KU-101 (resistant line against Plasmodiophora brassicae race race 6) and CS-113 (susceptible line) were crossed and their progeny lines F$_1$, BC$_1$F$_1$, F$_2$, and F$_3$ were produced for the construction of the genetic linkage map of R brassicae race 6-resistant Brassica campestris ssp. pekinensis genome. Restriction fragment length polymorphism (RFLP) was applied to compare between parents and their f$_2$ progenies with a total of 192 probes and 5 restriction enzymes. The constructed RFLP map covered 1,104 cM with a mean distance between genetic marker of 8.0 cM, and produced 10 linkage groups having 121 genetic loci. The loci of P. brassicae race 6 (CR6)-resistant Brassica genome were determined by interval mapping of quan-titative trait loci (QTL), which resulted from bioassay using the same race of the fungi in P3 population. Resistant loci were estimated in numbers 1 (Gl) and 3 (G3) linkage groups. In the regression test, Gl had a value of4.8 logarithm of odd (LOD) score, while C3 had values of 4.2-7.2. Given these results, the location of the CR6-resistant loci within the Brassica genome map can now be addressed.

Analysis and mapping of the re-1 gene for reduced embryo size in rice

  • Kien, Trinh Hong;Oh, Ji Min;Yang, Paul;Hong, Soon Kwan;Ahn, Sang Nag
    • 한국육종학회지
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    • 제42권1호
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    • pp.23-27
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    • 2010
  • The objective of this study was to map the gene for reduced embryo size in rice using DNA markers. The reduced embryo size mutant was induced from N-methyl-N-nitrosourea (MNU) treated Taichung 65. Genetic analysis revealed that the phenotype of the reduced embryo was controlled by a single recessive gene, designated as re-1. For mapping the gene controlling embryo size, an $F_2$ population was developed from a cross between the Korean Tongil-type, Milyang 23 (Oryza sativa ssp. indica) and the mutant. The ratio of $F_2$ seeds nearly fitted to 3:1 ratio, indicating that this phenotype was controlled by a single recessive gene. Bulked sergeant analysis was performed with SSR markers. The gene for the reduced embryo size was detected on chromosome 1. The gene was further mapped between two SSR markers, RM315 and RM265 on chromosome 1 (approximately 1.5 Mb interval). The linked markers will facilitate selection of this grain character in a breeding program and provide the foundation for positional cloning of this gene.

돼지의 QTL 검색을 위한 유의적 임계수준(Threshold) 결정 (Determination of Significance Threshold for Detecting QTL in Pigs)

  • 이학교;전광주
    • Journal of Animal Science and Technology
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    • 제44권1호
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    • pp.31-38
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    • 2002
  • 양적형질 유전자좌위(Quantitative trait loci; QTL) 연관지도 작성을 위해 regression interval mapping method에 의해 Berkshire종과 Yorkshire종간 교배를 통해 생산된 $F_2$ 집단에서 실시하였다. 염색체내 QTL 위치를 결정하기 위해 regression 모델을 통해 계산된 검정통계량(F-statistic)에 대한 유의적인 threshold 수준의 설정은 permutation test 및 Lander와 kruglyak (1995)에 의해 제시된 방법으로 산출하였다. 525두 $F_2$ 개체에 대해 조사된 기록 중 5형질(도체중, 등심 단면적, 근내지방 교잡도, 콜레스테롤 함량, 척추 늑골 등지방 두께) 기록을 분석에 이용하였고 genome 전체에 걸친 125개의 microsatellite marker에 대해 3세대 집단 모두 개체에 대해 유전자형을 조사하였다. 회귀분석 모형에 따라 additive 및 dominance 효과를 추정하였으며 이때 모든 회귀계수 값과 F-검정 통계량은 각각 1cM 단위로 추정하였다. 각 형질별, 염색체별로 10,000회의 permutation에 의해 genome-wise 및 chromosome-wise threshold를 추정하였다. Lander와 Kruglyak(1995)에 의해 제시된 방법으로 산출된 threshold 값은 매우 높게 추정되어 이러한 threshold의 적용시 실제로 QTL 존재 여부를 인정할 수 있는 경우의 수가 permutation에 의해 유도된 threshold를 적용했을 때보다 상대적으로 적은 결과를 보였다. 5% genome-wise threshold의 경우 형질별로 다소 상이한 경향을 나타냈으며 분석에 활용된 5개 형질에 대해 총 4개의 QTL이 5% genome-wise 수준에서 검색되었다.

RAPD Loci for Seed Protein and Oil Content in Soybean (Glycine max)

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    • 한국자원식물학회지
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    • 제10권3호
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    • pp.247-249
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    • 1997
  • Seed protein and oil content is important trait in the soybean. Both seed protein and oil content in this plant species is inherited quantitatively. A 68-plant $F_2$ segregation population derived from a mating between Mercury and PI 467.468 was evaluated with random amplified polymorphic DNA (RAPD) markers to identify QTL related to seed protein and oil content. Marker OPB12 was found to be associated with differences in seed protein content. Four markers, OPA09b, OPM07b, OPC14, and OPN11b had highly significant effects on seed oil content. By interval mapping, the interval between marker OPK3c and OPQ1b on linkage group 13 contained a QTL that explained 25.7% variation for seed oil content.

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DOA 기반 학습률 조절을 이용한 다채널 음성개선 알고리즘 (Multi-Channel Speech Enhancement Algorithm Using DOA-based Learning Rate Control)

  • 김수환;이영재;김영일;정상배
    • 말소리와 음성과학
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    • 제3권3호
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    • pp.91-98
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    • 2011
  • In this paper, a multi-channel speech enhancement method using the linearly constrained minimum variance (LCMV) algorithm and a variable learning rate control is proposed. To control the learning rate for adaptive filters of the LCMV algorithm, the direction of arrival (DOA) is measured for each short-time input signal and the likelihood function of the target speech presence is estimated to control the filter learning rate. Using the likelihood measure, the learning rate is increased during the pure noise interval and decreased during the target speech interval. To optimize the parameter of the mapping function between the likelihood value and the corresponding learning rate, an exhaustive search is performed using the Bark's scale distortion (BSD) as the performance index. Experimental results show that the proposed algorithm outperforms the conventional LCMV with fixed learning rate in the BSD by around 1.5 dB.

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