• 제목/요약/키워드: High-resolution NMR

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Terpenoids from Citrus unshiu Peels and Their Effects on NO Production

  • Vu, Thi Oanh;Seo, Wonyoung;Lee, Jeong Hyung;Min, Byung Sun;Kim, Jeong Ah
    • Natural Product Sciences
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    • 제26권2호
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    • pp.176-181
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    • 2020
  • Two new compounds, 3-methyl-but-2-en-1-yl-1-O-β-xylopyranosyl-(1"→2')-O-β-glucopyranoside (1) and 1-O-β-glucopyranosyl-6-hydroxy-2-methyl-hep-2-enoic acid (2), along with sixteen known terpenoids were isolated from the peels of Citrus unshiu Markov. Their structures were elucidated based on extensive NMR analyses (1H NMR, 13C NMR, DEPT, COSY, HMQC, and HMBC) and high-resolution mass spectrometry. In addition, all isolates (1 - 18) were tested their effects on nitric oxide (NO) production in RAW264.7 cells. Limonin (15) showed to inhibit LPS-induced NO production in a concentration-dependent manner without cytotoxicity.

Study of Metabolic Profiling Changes in Colorectal Cancer Tissues Using 1D 1H HR-MAS NMR Spectroscopy

  • Kim, Siwon;Lee, Sangmi;Maeng, Young Hee;Chang, Weon Young;Hyun, Jin Won;Kim, Suhkmann
    • Bulletin of the Korean Chemical Society
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    • 제34권5호
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    • pp.1467-1472
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    • 2013
  • Metabolomics is a field that studies systematic dynamics and secretion of metabolites from cells to understand biological pathways based on metabolite changes. The metabolic profiling of intact human colorectal tissues was performed using high-resolution magic angle spinning (HR-MAS) NMR spectroscopy, which was unnecessary to extract metabolites from tissues. We used two different groups of samples, which were defined as normal and cancer, from 9 patients with colorectal cancer and investigated the samples in NMR experiments with a water suppression pulse sequence. We applied target profiling and multivariative statistical analysis to the analyzed 1D NMR spectra to identify the metabolites and discriminate between normal and cancer tissues. Cancer tissue showed higher levels of arginine, betaine, glutamate, lysine, taurine and lower levels of glutamine, hypoxanthine, isoleucine, lactate, methionine, pyruvate, tyrosine relative to normal tissue. In the OPLS-DA (orthogonal partial least square discriminant analysis), the score plot showed good separation between the normal and cancer groups. These results suggest that metabolic profiling of colorectal cancer could provide new biomarkers.

Comparison of metabolic profiling of Daphnia magna between HR-MAS NMR and solution NMR techniques

  • Kim, Seonghye;Lee, Sujin;Lee, Wonho;Lee, Yujin;Choi, Juyoung;Lee, Hani;Li, Youzhen;Ha, Seulbin;Kim, Suhkmann
    • 한국자기공명학회논문지
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    • 제25권2호
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    • pp.12-16
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    • 2021
  • Daphnia magna is used as target organism for environmental metabolomics. The metabolome of D. magna was studied with NMR spectroscopy. Most studies used the extract of D. magna, but the reproducibility cannot be obtained using extracted sample. In this study, lyophilized D. magna samples were analyzed with two different 1H NMR techniques, HR-MAS on intact tissues and solution NMR on extracted tissues. Samples were measured three times using 600 MHz NMR spectrometer. Metabolite extraction required more than twice as many D. magna, but the metabolite intensity was lower in solution NMR. In the spectra of HR-MAS NMR, the lipid signal was observed, but they did not interfere with metabolite profiling. We also confirmed the effect of swelling time on signal intensities of metabolites in HR-MAS NMR, and the results suggest that appropriate swelling should be used in lyophilized D. magna to improve the accuracy of metabolite profiles.

현무암과 포놀라이트 비정질 규산염의 원자구조 차이에 대한 고상핵자기 공명 분광분석 연구 (A Solid-state 27Al MAS and 3QMAS NMR Study of Basaltic and Phonolitic Silicate Glasses)

  • 박선영;이성근
    • 한국광물학회지
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    • 제28권1호
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    • pp.61-69
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    • 2015
  • 현무암과 포놀라이트 조성을 가진 마그마는 분화 양상과 거시적 물성에서 많은 차이를 보이나 이에 대한 원자구조 단위의 근본적인 원인은 아직 명확히 밝혀지지 않았다. 본 연구에서는 일차원과 고해상도 이차원 고상 핵자기공명 분광분석(Nuclear Magnetic Resonance, NMR)을 이용하여 현무암질 마그마의 모델인 투휘석과 아노르다이트 공융점 조성을 가진 비정질 규산염과 포놀라이트 조성의 비정질 규산염의 Al 주변 원자 구조를 관찰하였다. $^{27}Al$ MAS NMR 실험 결과 두 조성 모두 Al 피크가 지배적인 것을 보여주며 현무암 조성의 비정질 규산염의 피크 반치폭이 포놀라이트 조성보다 약 2배 더 넓은 것으로 관찰된다. 이것은 현무암질 조성에서의 Al 주변의 위상 무질서도가 포놀라이트 조성보다 높다는 것을 의미한다. $^{27}Al$ 3QMAS NMR 실험 결과 Al과 Al이 구별되어 관찰되며 현무암 조성의 비정질 규산염에서 포놀라이트 조성에는 관찰되지 않는 Al이 약 3.3% 관찰된다. 이는 현무암질 마그마가 포놀라이트 마그마에 비해 Al 주변의 배열 무질서도가 더 큰 것을 의미한다. 사중극자 상호관계를 설명하는 계수 또한 현무암 조성의 비정질 규산염이 포놀라이트 조성의 비정질 규산염에 비해 큰 값을 나타내며 이것 또한 Al 주변의 위상 무질서도가 더 큰 것을 확증해준다. 본 논문에서 규명한 현무암과 포놀라이트 조성의 비정질 규산염의 원자 구조 차이는 점성도와 같은 조성에 따른 마그마의 물성 차이에 대한 미시적 기원을 제시한다.

Synthesis of Poly(1,6-heptadiyne) Derivatives Containing Bulky Substitutents by Metathesis Polymerization

  • Jin, Sung-Ho;Jin, Jeong-Yi;Kim, Young-Inn;Park, Dong-Kyu;Gal, Yeong-Soon
    • Macromolecular Research
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    • 제11권6호
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    • pp.501-505
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    • 2003
  • Poly(l,6-heptadiyne) derivatives with phenoxy and 3,7-dimethyloctyloxyphenoxy substituents were synthesized using metathesis polymerization. Polymerizations using MoCl$\sub$5/ as the sole catalyst gave high yields and the resulting polymers were completely soluble in organic solvents. The polymers' structures and thermal properties were characterized using NMR and UV-Vis spectroscopy, as well as with TGA and DSC thermograms. From the analysis of the high-resolution $\^$13/C-NMR spectra, we was found that these polymers contain six-membered rings. The number-average molecular weights and polydispersities of the polymers were ca. 7.0∼20 ${\times}$ 10$^3$ and 3.1∼5.8, respectively. The glass transition temperatures of the polymers were found to be in the range 91∼159$^{\circ}C$.

$^1H-NMR$을 이용한 계피의 t-cinnamaldehyde 정량분석 (Quantitative Analysis of t-Cinnamaldehyde of Cinnamomum cassia by $^1H-NMR$ Spectrometry)

  • 송명종;유종수;백남인
    • Applied Biological Chemistry
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    • 제48권3호
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    • pp.267-272
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    • 2005
  • 계피(계지, Cinnanmomum cassia)의 주요성분인, trans-cinnamaldehyde를 $^1H-NMR$ 분광법을 이용하여 정량분석하였다. 핵자기 공명법을 이용한 정량분석의 응용가능성을 확인하기 위하여, t-cinnamaldehyde의 $^1H-NMR$ 스펙트럼에서 시료의 농도와 측정온도를 변화시킴에 따라 chemical shift의 변화와 적분값의 변화를 관찰하였다. t-Cinnamaldehyde(7.1429 mg/ml)를 19, 25, 30, 40 및 $50^{\circ}C$ 하에서 $^1H-NMR$ 측정한 결과, aldehyde methine signal(doublet)의 chemical shift가 9.7202, 9.7184, 9.7169, 9.7142 및 9.7124 ppm에서 관측되었다. 이는 측정온도는 signal의 chemical shift의 변화에 중요한 변수가 되지 않는다는 것을 의미하였다. 또한, aldehyde signal의 적분값이 $1.37(19^{\circ}C),\;1.37(25^{\circ}C),\;1.37(30^{\circ}C),\;1.37(40^{\circ}C)$$1.37(50^{\circ}C)$로써, 측정온도가 signal의 적분값에는 전혀 영향을 미치지 않는 것으로 나타났다. 동일한 온도 $25^{\circ}C$에서 0.4464, 0.8929, 1.7857, 3.5714, 7.1429 및 14.286 mg/ml의 농도의 시료에 대한 $^1H-NMR$ 측정 결과, aldehyde기의 chemical shifts는 각각 9.7206, 9.7201, 9.7196, 9.7192, 9.7185 및 9.7174 ppm에서 나타났다. 이는 각 시료의 농도가 증가함에 따라서 aldehyde의 signal이 고자장으로 약간 이동하는 것으로 나타났다. Aldehyde기의 doublet methine signal의 적분값과 각 시료의 농도에 따른 calibration curve는 직선으로 나타났으며, 매우 높은 회귀율($r^2=1.0000$)을 보였다. t-Cinnamaldehyde와 aldehyde기를 갖는 물질로써, C. cassia의 또 다른 구성성분인 t-2-methoxycinnamaldehyde($7.1429\;mg/ml\;CDCl_3,\;25^{\circ}C$)에 대해서, $^1H-NMR$ 스펙트럼을 측정한 결과, t-cinnamaldehyde는 ${\delta}_H$ 9.7174(9.7078, 9.7270)서 관측되었다. t-2-Methoxycinnamaldehyde는 ${\delta}_H$ 9.6936(9.6839, 9.7032)에서 관측되었다. 따라서, 두 화합물의 chemical shift의 차이는 resolution 값이 0.45 Hz인 NMR 스펙트럼 상에서 충분히 구분할 수 있을 정도로 나타났다. 위의 방법을 이용하여, 추출용매에 따른 C. cassia 내의 t-cinnamaldehyde의 함량을 분석한 결과, n-hexane, $CHCl_3$ 및 EtOAc로 추출하였을 때에, 각각 94.2 mg/g(0.94%), 137.6 mg/g(1.38%), 140.1 mg/g(1.40%)으로 결정되었다.

Novel Sesquiterpenoid Compounds from Culture Broth of Stereum hirsutum

  • Cho, Yang-Rae;Yun, Bong-Sik;Lee, In-Kyoung;Lee, Tae-Ho;Yoo, Ick-Dong
    • 한국응용약물학회:학술대회논문집
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    • 한국응용약물학회 1998년도 Proceedings of UNESCO-internetwork Cooperative Regional Seminar and Workshop on Bioassay Guided Isolation of Bioactive Substances from Natural Products and Microbial Products
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    • pp.130-130
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    • 1998
  • Two novel compounds SSC1 and SSC2 were isolated from culture broth produced from the strain of Stereum hirsutum by using of YM broth. They were isolated through HP-20 column chromatography, silica gel column chromatography and preparative HPLC, successively. The molecular formulas of SSC1 and SSC2. were determined as C$\sub$15/H$\sub$22/O$_3$ by high resolution EI -mass. The chemical structures of SSC1 and SSC2 were determined as sesquiterpenoid compounds by spectroscopic analysis of UV, IR, $^1$H NMR, $\^$13/C NMR, DEPT, HMQC and HMBC spectrum.

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NMR STRUCTURE DETERMINATION OF A NOVEL CONOTOXIN, [Pro 7,13] $\alpha$A-conotoxin $P_{IVA}$

  • Han, Kyou-Hoon;Hwang, Kae-Jung;Kim, Seung-Moak;Kim, Soo-Kyung;William R. Gray;Shon, Ki-Joon;Jean Rivier;Baldomero M. Olivera
    • 한국생물물리학회:학술대회논문집
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    • 한국생물물리학회 1996년도 정기총회 및 학술발표회
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    • pp.10-10
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    • 1996
  • High-resolution solution conformation of a novel conotoxin, [Pro 7,13] $\alpha$A-conotoxin $P_{IVA}$, GCCGSYPNAACHPCSCKDROSYCGQ-N $H_2$, has been determined by two-dimensional $^1$H nmr methods in combination with distance geometry calculation to rmsd values of 0.90 $\AA$ and 1.16 $\AA$ for the backbone and heavy atoms, respectively. Total of 324 NOE-derived interproton distance restraints including 33 long-range NOE restraints a well as 11 $\Phi$ and 7 $\chi$$^1$ torsion angle restraints were used for computation of structures. (omitted)d)

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Cytotoxic Polyketides from the Marine Sponge Discodermia calyx

  • Shinde, Pramod B.;Mansoor, Tayyab A.;Luo, Xuan;Hong, Jong-Ki;Lee, Chong-O.;Jung, Jee-H.
    • Bulletin of the Korean Chemical Society
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    • 제28권6호
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    • pp.990-994
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    • 2007
  • Bioassay-guided fractionation of the MeOH extract from the sponge Discodermia calyx collected off the coast of Jeju Island, South Korea, led to the isolation of a polyketide, icadamide C (1), along with previously reported theopederin K (3). Structure elucidation was performed by a combination of high resolution mass and 2D-NMR (principally COSY, HMBC, HSQC, and NOESY) spectroscopy. Stereochemistry of compound 1 was determined as 2R*, 3R*, 6R*, 10S*, 11S*, 12R*, 13S*, 15R* and 2'S by NMR data and Marfey analysis. Isolated metabolites displayed potent cytotoxic activity against a small panel of five human solid tumor cell lines with ED50 values of less than 0.1 μg/mL.

From Folding to Sweet Taste: NMR, Circular Dichroism and Fluorescence Studies on Sweet Protein, Monellin

  • Lee, Weontae;Sung, Yoon-hui;Heedouk Hong;Chaejoon Cheong;Cho, Joong-Myung
    • 한국생물물리학회:학술대회논문집
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    • 한국생물물리학회 1999년도 학술발표회 진행표 및 논문초록
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    • pp.18-18
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    • 1999
  • A sweet protein monellin was originally isolated from the berries of the West African plant Dioscoreophyllum cumminsii. The studies for molecular interaction of different sweeteners with receptor as well as receptor binding model have been proposed previously. The high-resolution solution structure of single-chain monellin (SCM) has been determined to investigate structural origin of sweet taste by NMR spectroscopy and simulated annealing calculations.(omitted)

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