• Title/Summary/Keyword: Halobacterium

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Genomic Analysis of the Extremely Halophilic Archaeon Halobacterium noricense CBA1132 Isolated from Solar Salt That Is an Essential Material for Fermented Foods

  • Lim, Seul Ki;Kim, Joon Yong;Song, Hye Seon;Kwon, Min-Sung;Lee, Jieun;Oh, Young Jun;Nam, Young-Do;Seo, Myung-Ji;Lee, Dong-Gi;Choi, Jong-Soon;Yoon, Changmann;Sohn, Eunju;Rahman, MD. Arif-Ur;Roh, Seong Woon;Choi, Hak-Jong
    • Journal of Microbiology and Biotechnology
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    • v.26 no.8
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    • pp.1375-1382
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    • 2016
  • The extremely halophilic archaeon Halobacterium noricense is a member of the genus Halobacterium. Strain CBA1132 (= KCCM 43183, JCM 31150) was isolated from solar salt. The genome of strain CBA1132 assembled with 4 contigs, including three rRNA genes, 44 tRNA genes, and 3,208 open reading frames. Strain CBA1132 had nine putative CRISPRs and the genome contained genes encoding metal resistance determinants: copper-translocating P-type ATPase (CtpA), arsenical pump-driving ATPase (ArsA), arsenate reductase (ArsC), and arsenical resistance operon repressor (ArsR). Strain CBA1132 was related to Halobacterium noricense, with 99.2% 16S rRNA gene sequence similarity. Based on the comparative genomic analysis, strain CBA1132 has distinctly evolved; moreover, essential genes related to nitrogen metabolism were only detected in the genome of strain CBA1132 among the reported genomes in the genus Halobacterium. This genome sequence of Halobacterium noricense CBA1132 may be of use in future molecular biological studies.

Production of protease by the extreme halophile, Halobacterium sp. (고도 호염성 Halobacterium sp.에 의한 protease의 생산)

  • Ahn, Young-Seok;Kim, Chan-Jo;Choi, Seong-Hyon
    • Applied Biological Chemistry
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    • v.33 no.3
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    • pp.247-251
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    • 1990
  • A bacterial strain which produce a high level of protease was isolated from a commercial salted fish, squid jetkal. This strain was identified as a strain belong to the genus Halobacterium and was found to be extremely halophilic : more than 2.0M of sodium chloride was required for the growth. The protease production by the strain was maximized when grown on Norberg & Hofsten medium containing 4.5M sodium chloride, 1.5% gelatin and 0.4% yeast extract (initial pH 7.0) for 108hrs at $38^{\circ}C$.

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$Na^+$ Requirement of NADH dehydrogenase from an Extreme halophile, Halobacterium sp. EH10 Isolated from a Saltern in Korea (Halobacterium sp. EH10 NADH dehydrogenase의 $Na^+$ 요구성)

  • Bae, Moo;Lee, Jeong-Im
    • Microbiology and Biotechnology Letters
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    • v.19 no.2
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    • pp.153-157
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    • 1991
  • Intracellular enzymes of an extreme halophilic bacterium, Halobacterium sp. HE10, isolated from a saltern in Korea was investigated. The membrane-bound enzyme, NADH dehydrogenase, involved in electron transport system was stimulated by the addition of 2.0 M NaCl. The respiratory enzyme activities such as NADH oxidase and NADH dehydrogenase was decreased on removal of $Na^+$ ion and restored when replaced with cations like $K^+$, $Li^+$and $NH_{4}^{+}$ ions. Furthermore, their activities were affected by the anions such like carbonate, acetate, sulfate, chloride and nitrate at the presence of $Na^+$ion. Lactate dehydrogenase activity was highest at the asturated solution of NaCl and isocitrate dehydrogenase activity was a maximum level at 1.0 M NaCl. These results suggested that the enzyme activites of the respiratory chain in Halobacterium sp. EH10 was stimulated by the presence of $Na^+$ ion.

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Production of Bacteriorhodopsin by Halobacterium halobium in the Internal Membrane Bioreactor (내부 필터 발효기에서 Halobacterium halobium의 배양에 의한 박테리오로돕신의 생산)

  • 엄영순;박준택;홍순호;이상엽;장호남
    • KSBB Journal
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    • v.13 no.3
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    • pp.268-271
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    • 1998
  • Bacteriorhodopsin in the purple membrane (PM) of halobacteria has recently been attracting much attention to be used as a component of molecular electron device and optical computers. In order to increase the productivity of bacteriorhodopsin in high cell density cultures of Halobacterium halobium R1, an internal membrane cell-retention bioreactor system was employed. As a result, the production of cell mass at OD660 of 12 and of bacteriorhodopsin at 125-130 mg/L were obtained using the internal membrane bioreactor system at a dilution rate of 0.066 hr-1. The productivity achieved by the internal membrane system (0.7 mg/L$.$hr) was 3.5-fold higher than that obtained by the corresponding batch cultivations (0.2 mg/L$.$hr).

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A Study on Growth Condition and Proteolytic Enzyme of Halobacterium halobium (Halobacterium halobium 의 생육조건 및 Protease 에 관한 연구)

  • 민윤식
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.23 no.5
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    • pp.856-862
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    • 1994
  • In salt-preserved foods of every kinds, it was examined the growth condition of halophilic bacteria that induced a change of colour, taste, nutritive substance, a production condition of enzyme and a character of crude enzyme. Used bacteria is H. halobium a kind of extremely halophilic bacteria, and the required of optimum culture needed a quite long time of crude enzyme production is 168 hours. Optimum pH is about 7-7.5, so the traditional food of such neutrality pH as soybean paste and soy sauce particularly come into trouble because the growth can flourish in neutrality or alkaliescence, and the crude enzyme also appeared that best activation between pH 6 and pH 8. The optimum temperature is about 37$^{\circ}C$, the optimum temperature of enzyme is about 40 $^{\circ}C$ and the temperature stability is settled for 15 minutes and it is completely inactivated at 10 minutes. In the influence of each metal ion, Fe++ and Mn++ a stimulated the growth of H.halobium and the activation of enzyme, Cu++ and Zn++ were identified that made the growth and the activation of enzyme inhibit.

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Identification and Characteristics of Extreme Halophilic bacteria Isolated from a Saltern in Korea (한국 염전으로 부터 분리한 고도 호염성 세균의 동정 및 특성)

  • Bae, Moo;Lee, Jeong-Im
    • Korean Journal of Microbiology
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    • v.29 no.1
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    • pp.56-62
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    • 1991
  • Extremely halophilic bacteria isolated from salterns at Mado, Kyunggido, Korea, were identified and investigated on their salt requirements. The results have shown that six strains were identified to be belonged to the genus Halobacterium and three strains identified as the fenus Halococcus. Among them, the optimal NaCl concentration for growth of Halobacterium sp. EH10 was at 4.2M and no growth occurs below 2.0M NaCl. The strain, EH10, is nonmotile and showed acid production from glucose, fructose and maltose while H. salinarum is motile and does not produce acid from any carbohydrates. On the other hand, the strain EH10 does not utilize readily glucose while a number of sugars are readily utilized for growth with acid production by H. saccharovorum. Thus, the isolate, EH10, was classified into the genus Halobacterium and could be a novel species of the genus by its main morphological and physiological features including G+C content. The optimal temperature for growth of the isolate, EH10, was 50.deg.C. But this strain did not grow when NaCl was replaced with KCl.

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Characteristics of the protease from the extreme halophile, Halobacterium sp. (고도 호염성 Halobacterium sp.가 생산하는 protease의 특성)

  • Ahan, Young-Seok;Kim, Chan-Jo;Choi, Seong-Hyun
    • Applied Biological Chemistry
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    • v.33 no.4
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    • pp.337-342
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    • 1990
  • The pretense from Halobacterium sp. was purified by ethanol precipitation and gel filtration on Sephadex G-75 and G-100. The purified enzyme was found to be homogeneous by polyacrylamide gel electrophoresis It's specific activity was 364units/mg protein and yield was 14% of the total activity of the culture filtrate. The Km value against casein was determined to be $4.2{\times}10^{-4}M$ by Lineweaver-Burk plot The optimal temperature and pH for the enzyme activity were $35^{\circ}C$ and pH 8.0, respectively. The enzyme was stable from 5.0 to 11.0 at relatively wide range of pH but was inactivated at the temperature above $50^{\circ}C$. $Ca^{2+}$ and $Mg^{2+}$ appeared to react as activators whereas $Fe^{3+},\;Zn^{2+},\;Cu^{2+},\;Hg^{2+}\;and\;Cd^{2+}$ as inhibitors. The enzyme activity reduced with increasing the concentration of NaCl : the apparent activity with 2M NaCl was 65% as compared with that without the salt However the enzyme was unstable without salts : the activity was lost when dialyzed against distilled water for 2hr, whereas maintained against 0.1M solution of $CaCl_2$ for 6hr.

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Volume Change of Membrane Mixed with Various Anesthetics in Halobacterium Halobium with Photo-Cyclic Energy (광순환 에너지를 갖는 Halobacterium Halobium에서 마취제의 혼합에 따른 Membrane의 부피 변화)

  • Kim, Ki-Jun;Sung, Ki-Chun;Lee, Hoo-Seol
    • Journal of the Korean Applied Science and Technology
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    • v.13 no.3
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    • pp.119-125
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    • 1996
  • The excess volumes of mixing of benzyl alcohol, ethyl alcohol, halothane, and procaine in vesicle and suspensions of several lipids have been determined at $25^{\circ}C$ using a excess volume dilatometer. The potency of general anesthetics has long been known to be correlated with lipid solubility. Denaturations of the bacteriorhodopsin, which is a sole membrane protein in the purple membrane of Halobacteriun Halobium, were studied by UV/Vis absorption changes. The excess volumes of mixing of benzyl alcohol and procaine in egg lecithin were all found to be negative and this result was confirmed as Miller's supposition.

A Study on Partial Molar Volume of Fluoxetine in Membrane of Holobacterium Holobium (Halobacterium Halobium의 Membrane에서 Fluoxetine의 Partial Molar Volume에 관한 연구)

  • Kim, Ki-Jun;Jeong, Hyeon-Ghak;Kim, Ju-Han;Song, Hui-jun
    • Journal of the Korean Applied Science and Technology
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    • v.35 no.1
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    • pp.157-162
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    • 2018
  • The partial molar volumes of an antidepressant in Halobacteriun Halobium and in suspensions of several lipids have been determined at $25^{\circ}C$ it using a excess volume dilatometer. The potency of general antidepressant, Fluoxetine has long been known to correlate with lipid solubility. Denaturations of the vesicle, which is a sole membrane protein in the purple membrane of Halobacteriun Halobium, were studied by absorption changes at 280 nm and fluorescence changes at 330 nm with excess volume dilatometer. The 1H NMR analysis of viscous polymer solutions by diffusion interchange is the important step by measurement. The partial molar volume and particle size of Fluoxetine in Halobacteriun Halobium were measured to be positive. An antidepressant can prevent diseases that produce a variety of cognitive and mental symptoms based on low morale and depression, resulting in poor daily performance.