• Title/Summary/Keyword: Habitat characteristic

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Characterization of Low-Temperature Enzymatic Reactions through Heterologous Expression and Functional Analysis of Two Beta-Glucosidases from the Termite Symbiotic Bacterium Elizabethkingia miricola Strain BM10

  • Dongmin LEE;Tae-Jong KIM
    • Journal of the Korean Wood Science and Technology
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    • v.51 no.4
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    • pp.270-282
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    • 2023
  • Lower termites need symbiotic microbes for cellulose digestion. Elizabethkingia miricola strain BM10 has been proposed as a symbiotic microbe that assists in low-temperature digestion and metabolism of Reticulitermes speratus KMT1, a termite on Bukhan Mountain, Seoul, Korea. In E. miricola strain BM10, β-glucosidase genes expressed at 10℃ were identified, and the psychrophilic enzymatic characteristic was confirmed by heterogeneously expressed proteins. Crude β-glucosidase in the culture broth of E. miricola strain BM10 showed specific enzymatic properties, and its substrate affinity was 4.69 times higher than that of Cellic CTec2. Among the genes proposed as β-glucosidase, two genes, bglB_1 and bglA_2, whose gene expression was more than doubled at 10℃ than at 30℃, were identified. They were heterogeneously expressed in Escherichia coli and identified as psychrophilic enzymes with an optimal reaction temperature of about 20℃-25℃. In this study, E. miricola strain BM10, a symbiotic bacterium of lower termites, produced psychrophilic β-glucosidases that contribute to the spread of the low-temperature habitat of a lower termite, R. speratus KMT1.

Correlation Model between Growth Characteristics and Soil Factors of Tulipa edulis Habitat (산자고 자생지의 생육특성 및 토양요인간 상관모형)

  • You Ju-Han;Jung Sung-Gwan;Lee Cheol-Hee
    • Korean Journal of Plant Resources
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    • v.19 no.1
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    • pp.180-188
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    • 2006
  • This study was carried out to offer the raw data on the method of cultivation and ecological characteristic by systematical analysing habitat environment of Tulipa edulis that was expected as medicinal and ornamental resource. The habitat environment was that the altitude was 245 m, the aspect of south, the size of approximately $49\;m^2$, and there was analyzed that Tulipa edulis grew wild in the dryly sunny spot. The vascular plants were summarized as 62 taxa; 28 families, 59 genera, 50 species, 11 varieties and 1 forms, and the resource plants were classified that there were 23 taxa of ornamental plants(37.1%), 43 taxa of edible plants(69.4%), 34 taxa of medicinal plants(54.8%) and 29 taxa of others(46.8%). In the results of soil factors analysis, there showed that acidity was pH 4.9, organic matter content of 4.9%, available $P_{2}O_{5}$ of 3.6 mg/kg, exchangeable $K^+$ of $0.5\;cmol^{+}/kg$, exchangeable $Ca^{2+}$ of $3.0\;cmol^{+}/kg$, exchangeable $Mg^{2+}$ of $0.8\;cmol^{+}/kg$, cation exchange capacity(C.E.C) of $12.3\;cmol^{+}/kg$ and electrical conductivity(EC) of 0.3 dS/m. In the results of correlation analysis between soil factors, exchangeable $Ca^{2+}$ and C.E.C were highly correlative. The growth characteristics of Tulipa edulis were surveyed that height was 7.6 cm, leaf width of 0.6 cm, leaf length of 12.7 cm, flower width of 2.8 cm, peduncle of 5.4 cm and chlorophyll of $34.7\;{\mu}g\;mg^{-1}$. In the results of correlation analysis between growth characteristics, height and peduncle were highly correlative. In the results of correlation analysis between soil factors and growth characteristics, exchangeable $K^{+}$ and leaf length were high relativity but they were confirmed negative relation. In the results of growth model analysis, R-square of leaf width and exchangeable $K^{+}$ was some 86.4% and that of chlorophyll and exchangeable $K^{+}$ was some 83.7%.

Biodiversity and Characteristic Communities Structure of Freshwater Ecosystems in the Western Area of DMZ, Korea (민통선이북지역(DMZ) 서부평야 일대의 수생태계 생물다양성 및 군집 특성)

  • Jung, Sang-Woo;Kim, Yoon-Ho;Kim, Hyun-Mac;Kim, Su-Hwan
    • Korean Journal of Environment and Ecology
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    • v.32 no.6
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    • pp.603-617
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    • 2018
  • This study surveyed the diversity and community characteristics of benthic macroinvertebrates and freshwater fish, which are the main animal classifications in a hydro ecosystem, from May to September 2017 in the western plains of the Demilitarized Zone (DMZ). The results showed a total of 125 species of benthic macroinvertebrates belonging to 66 families, 19 orders, and four phyla in the streams and wetlands. Among benthic macroinvertebrates, Coleoptera (27 spp.: 21.60%) was the largest group in terms of species richness followed by Odonata (26 spp.: 20.80%), non-Insecta (22 spp.: 17.60%), and Hemiptera (11 spp.: 8.80%) occupying in the lentic area. Of the feeding function groups (FFGs), predators (51 spp.: 56.67%) showed a relatively larger presence, indicating the dominance of hygrophilous invertebrates that usually inhabit the freshwater wetlands or ponds. Of the habitat oriented groups (HOGs), climbers (33 spp.: 24.44%) and burrowers (17 spp.: 12.59%) were the dominant groups. This observation is typical in a slow flowing habitat and can lead to the disturbance of the ecosystem due to cannibalism among predators. Cannibalism can be caused by stress induced by various population and environmental factors. For the ecosystem services benchmark (ESB) value, site 13 appeared to be the highest with 82 marks while other sites showed relatively lower rates and indices (III water quality class with ${\alpha}$-mesosaprobic). The analysis result of stability factors showed that almost all sites were evaluated to be the I characteristic group with high resilience and resistance or the III characteristic group that was sensitive to environmental disturbance and formed uneven and unstable communities. Of the freshwater fishes, 46 species (3,405 individuals) belonging to 39 families and 18 orders were identified in all the investigated sites. Among them, Cyprinidae (30 spp.: 65.2%) was the largest group, and Zacco koreanus was identified as the dominant species (728 individuals, 21.4%). The survey of freshwater fish communities found both stable communities (sites 7 and 13) with low dominant index (0.39) and high diversity index (2.29) and unstable communities (sites 2, 3, 8, and 10) in opposite tendency. This survey found five Korean endemic species, 17 species belonging to the export controlled species, two endangered species level II (Lethocerus deyrollei and Cybister chinensis), and rare species (Dytiscus marginalis czerskii) among benthic macroinvertebrates. The survey also found an invasive species, Ampullarius insularus, which was distributed throughout the whole area and thus can continuously disturb the ecosystem in the western plain area in the DMZ. Of freshwater fish, one natural monument (Hemibarbus mylodon) and three endangered species level II (Acheilognathus signifer, Gobiobotia macrocephalus, and G. brevibarba) were observed. The survey also found four introduced species (Pomacea canaliculate, Carassius cuvieri, Lepomis macrochirus, Micropterus salmoides) in the western DMZ area, indicating the need for the protection and conservation measures.

Planning for Amphibians Habitats in Urban Forest Wetlands, Korea (도시 산림습지 내 양서류 서식처 조성방안 연구)

  • Hur, Myung-Jin;Han, Bong-Ho;Kwak, Jeong-In
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.20 no.6
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    • pp.1-19
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    • 2017
  • This study set out to identify problems with amphibian habitation by the wetland types and improve their habitation environment in urban forest wetlands, thus creating a habitat for amphibians. Study site include forest swamps in Jatjul Park as well as Yeoji neighborhood Park in Guro-gu, and in Choansan neighborhood Park in Dobong-gu. The forest swamp in Jatjul Park gets its water from Mt. Maebong and it is a former escalated farmland-turned wetland. The swamp area is $2,500m^2$, a forest zone and a landscape planting site are 83.27% and 6.70% each. Target species Seoul pond frogs are inseparable from rice fields because they live in a short radius of and lay eggs in or near paddy fields, and Rana nigromaculata have similarities with Rana plancyi chosenica in choosing their habitats. There was need for paths that would lead to other paths so amphibians would spread to other parts of the forest and for measures to secure open water. Modifying a variety of routes for water, human and animals along with building a buffer to keep the core habitation zones were required. The forest swamp in Yeonji neighborhood Park used to be a water reservoir on the foot of Mt. Gunji. The swamp area is $1,980m^2$, a forest zone and farmland account for 80.61% and 4.88% each. Non-point pollutants from upstream along run into the subject forest marsh, bare ground on the around swamp and steep stone embankments obstructed amphibians. Target species was Bufo gargarizans that live in forests and edges of hills and spawn in deep water. The forest swamp in Choansan neighborhood Park gets its water from Mt. Choan and it is close to its water source that it is a mountain stream forest wetland. The basin and the swamp are $35,240m^2$ and $250m^2$ in size respectively. A forest zone accounts for 90.20%, high stone embankments laid in refurbishing the valley obstruct amphibians and there is water shortage in times of droughts. Target species were Rana coreana, Rana dybowskii and Hynobius leechii that live in mountain valleys, streams and wetlands and lay eggs in forest marshes and rocks in valleys. Looking into the three swamps of amphibian habitation, I came to conclusions that those wetlands were suitable for their amphibians but man-made facilities blocked their corridors leading to other corridors and even killed off target species in some parts of those swamps by destroying those parts. Amphibians live in water, on ground and underground at different stages of life. Hence, we should take this fact into consideration when planning their habitats and design core habitation zones, buffers zone and use zones accordingly. Buffer zones ought to be between core habitation zones and surrounding trees. Aiming at protecting core habitation zones, buffers should be in harmony with habitation zones. Use zones should be minimized in size and not in direct contact with core habitation zones.

The Characteristic Study of the Microbial Habitat in the Muwisa Museum, Gangjin (강진 무위사 성보박물관 전시실의 미생물 서식환경 특성 연구)

  • Seo, Min Seok;Lee, Sun Myung;Hong, Jin Young
    • Journal of Conservation Science
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    • v.29 no.4
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    • pp.333-343
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    • 2013
  • The exhibition hall of museum has been damaged by abundant dust and mold of the air in the room. Occurrence of microorganisms on the surface of the cultural heritage will cause damages such as coloration, materials degradation, deterioration, etc. In this study, we investigated the temperature/humidity and microbes distribution in exhibition hall, display showcase, and on surface of wall paintings in the Muwisa museum. From some samples collected in exhibition hall and display showcase, we identified so many varieties of micro-organisms such as Aspergillus sp., Penicillium sp., Cladosporium sp.. In particular, we could see a large number of microorganisms in the number 1, 2 exhibition hall compared with the number 3 exhibition hall. The results examining the distribution of the temperature and humidity were showed as $28{\pm}4^{\circ}C$ and 70~80%, respectively. The number 1 exhibition showcase was higher humidity environment than the number 2, 3 exhibition hall compared to the distribution ratio, which considered as correlation with the distribution of microorganism concentration. As these results, we understood that high temperature and humidity in the exhibition hall and display showcase of the Muwisa museum were characteristics caused by environmental management and hermetically-sealed rooms.

Conservation Methods and Vascular plants of Oriental Thuja Community in Dodong, Daegu (도동 측백나무군락지의 식물상 및 보전방안)

  • Choi, Byoung-Ki;Lim, Jeong-Cheol;Lee, Chang-Woo
    • Journal of the Korean Institute of Traditional Landscape Architecture
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    • v.33 no.3
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    • pp.72-83
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    • 2015
  • A plant diversity, which consists of indigenous plant community with Orientla thuja community (Natural monument no. 1) in Dodong, Daegu, is identified and analyzed as ecological characteristic to consider worth plants and vegetation resource of the region. The vascular plants of Thuja orientalis community were listed as 219 taxa (3.7% of all 4,881 taxa of Korean vascular plants); 67 families, 147 genera, 199 species, 16 varieties, and 4 forms. Vulnerable species (VU) and least concerned species (LC) were recorded based on IUCN standard; Koelretueria paniculata (VU), Thuja orientalis (LC), and Exochorda serratifolia (LC). Although the study site is a non-limestone area, a total of 15 taxa of calciphilous plants were identified; Cheilanthes argentea, Hypodematium glandulosopilosum, Asplenium retamuraria, Thuja orientalis, Spiraea blumei, Smilax sieboldii, etc. A total of 4 taxa endemic plants were identified; Prunus mandshurica for. barbinervis, Lespedeza maximowiczii var. tomentella, Forythia koreana (artificial origin), and Veronica pyrethrina. Among the list, 8 taxa of naturalized plants were identified; Fallopia dentatoalalta, Rumex crispus, Nasturtium officinale, Bidens frondosa, Erigeron annuus etc. Naturalization rate (NR) was 3.6%, of all 219 taxa of vascular plants and urbanization index (UI) was 2.2% of all 321 taxa of naturalized plants. Thuja orientalis occupies a lot of indigenous landscape in this study area which is the southern-limited part of a natural distribution where it can survive. The T. orientalis community, where indigenous plants have formed a characterful species composition based on habitat, has been confirmed as a worth national vegetation resource in an indigeous flora. It has been considered of plans for persistent conservation.

Study on the Growth Environment of 'Gangwha-mugwort' Through the Climatological Characteristic Analysis of Gangwha Region (강화지역의 기후특성 분석을 통한 '강화약쑥'의 생육 환경 연구)

  • Ahn, Joong-Bae;Hur, Ji-Na;Jung, Hae-Gon;Park, Jong-Ho
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.14 no.2
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    • pp.71-78
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    • 2012
  • Eupatilin, one of representative medical components of mugwort, can be efficiently extracted from the 'Gangwha Sajabalssuk'. The Eupatilin content may depend on environmental factors such as soil and regional climate in addition to a genetic factor and Gangwha region has a profitable environmental condition for the mugwort growth. In this study, the climatological characteristics of Gangwha was analyzed in order to find the environmental condition of mugwort containing high Eupatilin in term of atmospheric, oceanographic and land variables. The climate of Gangwha is characterized by the relatively low daily temperature and large diurnal variation with plenty of solar radiation, long sunshine duration and less cloudiness. According to our correlation analysis, the long sunshine duration and the large diurnal temperature variation are highly correlated with the Eupatilin contents. The result implies that Gangwha has the favorable conditions for the cultivation and the habitat of the high-Eupatilin concentrated mugwort. Because of the sea surrounding Gangwha Island with low salinity and moderate wind, the salt contained in sea breeze is relatively low compared to other regions. Furthermore, Gangwha has clean atmospheric environment compared to other regions because the concentrations of toxic gases harmful to crop growth such as nitrogen dioxide ($NO_2$), sulfite gas ($SO_2$) and fine dust (PM-10) are lower in the air. The ozone ($O_3$) concentration is moderate and within the level of natural production. It is also found that moderately coarse texture or fine loamy soils known as good for water drainage and for the growth and cultivation of the 'Gangwha-mugwort' are distributed throughout the areas around mountainous districts in Gangwha, coinciding with those of mugwort habitat.

Evaluation of the Movement Pattern of Siniperca scherzeri Using the Radio Telemetry in the Middle Part of the Geum-River where Wiers were Constructed Recently (Radio telemetry를 이용한 금강보 설치구간에서 쏘가리(Siniperca scherzeri)의 이동 특성)

  • Baek, Seung-Ho;Yoon, Ju-Duk;Kim, Jeong-Hui;Park, Sang-Hyeon;Lee, Jin-Woong;Jang, Min-Ho;Kim, Su Kyung;Byeon, Myeong-Seop
    • Korean Journal of Ecology and Environment
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    • v.48 no.2
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    • pp.77-85
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    • 2015
  • Siniperca scherzeri is major target species for restocking and restoration project as it is one of the economic species in South Korea. In this study, to investigate their ecological characteristics movement pattern and habitat characteristic of S. scherzeri were analyzed using radio telemetry. Three specimens released during spawning season, moved more than 10 km toward upstream from the release site. Whereas the remains released after spawning season, settled within 400 m of their release site except two specimens (Ss 11, 3.2 km; Ss, 15, 1.4 km). One of possible reason of upstream movement during spawning season is reproduction. The conditions of their settlement area is similar with reference conditions of their spawning ground. S. scherzeri were mainly detected near the edge of the water, and it may related with the facts that rocks are mainly located at the edge of the water and S. scherzeri prefers rocks for their shelter. AMD (Accumulated movement distance) positively related with body weight and condition factor K, but no significant relationship was identified with gender and total length. Daily movement boundary of S. scherzeri was $214.94m^2{\sim}3,257.19m^2$, and their movement was restricted near the edge of the water. The results of this study could be useful to restocking and restoration.

Analysis of Fish Compositions and Ecological Indicator Characteristic in Masan Reservoir. (마산저수지의 어류 종조성 및 생태 지표 특성 분석)

  • Han, Jung-Ho;Lee, Eui-Haeng;An, Kwang-Guk
    • Korean Journal of Ecology and Environment
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    • v.42 no.2
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    • pp.212-220
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    • 2009
  • In this study, we analyzed fish compositions and ecological characteristics such as trophic guilds and tolerance guilds in association with water quality characteristics in Masan Reservoir during November 2008. Total number of species were 12 species (6 families) and the dominant species were Zacco platypus, Hemiculter eigenmanni, and Pseudorasbora parva. We found three Korean endemic species and one exotic species, Carassius cuvieri. According to the analysis of ecological indicator characteristics, relative proportion of tolerant and omnivore species was 98% of the total indicating that probably, the fauna was influenced by physical habitat disturbance and physicochemical degradations. Fish distribution analysis along with littoral zone showed that the most fishes (${\sim}$95%) were observed in the littoral zone where emerged macrophytes were well developed. Also, substrate analysis indicated that the most species were found near silt area (11 species, 91.7%), so that the significant differences were found between the substrate types. Analysis of water quality indicated that concentrations of total phosphorus (TP) and chlorophyll-a (ChI-a) as a lake trophic indicator were judged as eutrophic states, respectively and COD as an indicator of organic matter pollution averaged 10.9 mg $L^{-1}$. Based on the water quality, this system were influenced by the nutrient enrichments and organic matter. The degradations of water quality in Masan Reservoir resulted in trophic compositions of fish (increase of omnivore species) and the dominance of tolerant fish. This Monitoring data may contribute changes of fish fauna and compositions in relation to habitat modifications and chemical water quality degradations in the future.

Locational Characteristics of Highly Pathogenic Avian Influenza(HPAI) Outbreak Farm (고병원성 조류인플루엔자(HPAI) 발생농가 입지특성)

  • KIM, Dong-Hyeon;BAE, Sun-Hak
    • Journal of the Korean Association of Geographic Information Studies
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    • v.23 no.4
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    • pp.140-155
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    • 2020
  • This study was conducted to identify the location characteristics of infected farms in the areas where livestock diseases were clustered(southern Gyeonggi-do and Chungcheong-do), analyze the probability of disease occurrence in poultry farms, find out the areas corresponding to the conditions, and use them as the basis for prevention of livestock diseases, selection of discriminatory prevention zones, and establishment of prevention strategies and as the basic data for complementary measures. The increase of one poultry farm within a radius of 3-kilometers increases the risk of HPAI infection by 10.9% compared to the previous situation. The increase of 1m in distance from major roads with two lanes or more reduces the probability of HPAI infection by 0.001% compared to the previous situation. If the distance of the poultry farm located with 15 kilometers from a major migratory bird habitat increases by 15 to 30 kilometers, the chance of infection with HPAI is reduced by 46.0%. And if the distance of the same poultry farm increase by more than 30 kilometers, the chances of HPAI infection are reduced by 88.5%. Based on the results of logistic regression, the predicted probability was generated and the actual area of the location condition with 'more than 15 poultry farms within 3km a radius of, within 1km distance from major roads, and within 30km distance from major migratory birds habitat was determined and the infection rate was measured. It is expected that the results of this study will be used as basic data for preparing the data and supplementary measures when the quarantine authorities establish discriminatory quarantine areas and prevention strategies, such as preventive measures for the target areas and farms, or control of vehicles, by identifying the areas where livestock diseases are likely to occur in the region.