• Title/Summary/Keyword: Genus Spiraea

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Analysis of the Phylogenetic Relationships in the Genus Spiraea Based on the Nuclear Ribosomal DNA ITS Region (핵 리보솜 DNA ITS 부위에 의한 조팝나무속 식물종의 계통 관계 분석)

  • Huh, Man-Kyu
    • Journal of Life Science
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    • v.22 no.3
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    • pp.285-292
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    • 2012
  • Genus Spiraea is composed of many long-lived woody species that are primarily distributed throughout Asia and Europe. In this study, we evaluated a representative sample of the 38 taxa in the world, including 14 in Korea, with nuclear ribosomal DNA internal transcribed spacer sequences (ITS) to estimate genetic relationships within the genus. The molecular data allowed us to resolve well-supported clades in the taxa. In 47 world accessions (38 taxa: 14 Korean taxa, 33 world taxa, and 9 overlapping taxa), total alignment length was 689 positions, of which 452 were parsimony informative, 527 variable, 75 singleton, and 159 constant characters. Although the phylogenic tree showed that many taxa of genus Spiraea were well separated from each other, many branches were not congruent with the morphological characteristics and geographical distributions of the genus. There were 430 segregating sites and the nucleotide diversity (${\pi}$) value was 0.281. Under the neutral mutation hypothesis, the probability that the Tajima test statistic (D) is positive (2.325) is more than 0.5. Therefore, there may be a site at which natural selection, which increases genetic variation, is operating.

The complete plastid genome and nuclear ribosomal transcription unit sequences of Spiraea prunifolia f. simpliciflora (Rosaceae)

  • Jeongjin CHOI;Wonhee KIM;Jee Young PARK;Jong-Soo KANG;Tae-Jin YANG
    • Korean Journal of Plant Taxonomy
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    • v.53 no.1
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    • pp.32-37
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    • 2023
  • Spiraea prunifolia f. simpliciflora Nakai is a perennial shrub widely used for horticultural and medicinal purposes. We simultaneously obtained the complete plastid genome (plastome) and nuclear ribosomal gene transcription units, 45S nuclear ribosomal DNA (nrDNA) and 5S nrDNA of S. prunifolia f. simpliciflora, using Illumina short-read data. The plastome is 155,984 bp in length with a canonical quadripartite structure consisting of 84,417 bp of a large single-copy region, 18,887 bp of a short single-copy region, and 26,340 bp of two inverted repeat regions. Overall, a total of 113 genes (79 protein-coding genes, 30 tRNAs, and four rRNAs) were annotated in the plastome. The 45S nrDNA transcription unit is 5,848 bp in length: 1,809 bp, 161 bp, and 3,397 bp for 18S, 5.8S, and 26S, respectively, and 261 bp and 220 bp for internal transcribed spacer (ITS) 1 and ITS 2 regions, respectively. The 5S nrDNA unit is 512 bp, including 121 bp of 5S rRNA and 391 bp of intergenic spacer regions. Phylogenetic analyses showed that the genus Spiraea was monophyletic and sister to the clade of Sibiraea angustata, Petrophytum caespitosum and Kelseya uniflora. Within the genus Spiraea, the sections Calospira and Spiraea were monophyletic, but the sect. Glomerati was nested within the sect. Chamaedryon. In the sect. Glomerati, S. prunifolia f. simpliciflora formed a subclade with S. media, and the subclade was sister to S. thunbergii and S. mongolica. The close relationship between S. prunifolia f. simpliciflora and S. media was also supported by the nrDNA phylogeny, indicating that the plastome and nrDNA sequences assembled in this study belong to the genus Spiraea. The newly reported complete plastome and nrDNA transcription unit sequences of S. prunifolia f. simpliciflora provide useful information for further phylogenetic and evolutionary studies of the genus Spiraea, as well as the family Rosaceae.

The petiole anatomy of the genus Spiraea L. (Rosaceae) in Korea (한국산 조팝나무속(Spiraea L. 장미과)의 엽병 해부)

  • Lee, Jeong-Ho;Kwon, Oh-Woung;Jang, Tae-Soo;Roh, Hee-Seon;Hong, Suk-Pyo
    • Korean Journal of Plant Taxonomy
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    • v.40 no.1
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    • pp.16-26
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    • 2010
  • The petiole anatomy of three sections (sects. Calospira, Chamaedryon, and Spiraria) in the genus Spiraea (Rosaceae), which are distributed/cultivated in Korea, was studied and described in details. The vascular bundle system of the distal, medial, and proximal parts of the petiole were studied using LM with the aim of documenting any differences in vascular anatomy. Significant variation of anatomical characters was found in petiole shape (dichotomy, lens or subcircular in outline), presence of two distinct lateral wings, the thickness of epidermis, number of vascular bundles, length of ventral axis, length of dorsiventral axis, width of median vascular bundle, and length of median vascular bundle. All features were compared and we concluded that petiole anatomical characters can be useful for providing diagnostic features to distinguish the studied taxa. A key for identifying the Spiraea taxa in Korea based on their petiole anatomical characters is also provided.

Genetic Diversity and Relationship of Genus Spiraea by Random Amplified Polymorphic DNA Markers (조팝나무속 분류군의 RAPD에 의한 유전적 다양성과 관련성)

  • Huh, Man-Kyu
    • Journal of Life Science
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    • v.20 no.7
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    • pp.983-990
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    • 2010
  • Genus Spiraea is a woody species primarily distributed throughout Asia. Many species of this genus are important plants medicinally and ecologically. I evaluated a representative sample of the sixteen taxa with random amplified polymorphic DNA (RAPD) markers to estimate genetic relationships within genus Spiraea. In addition, RAPD analysis was also conducted to estimate the genetic diversity and population structure of these species. As the typical populations of Spiraea were small, isolated, and patchily distributed for natural populations, they maintained a low level of genetic diversity for polymorphic primers. The mean H was 0.117 across species. The Korean endemic species (S. chartacea) and patchily distributed species (S. betulifolia) showed fewer alleles per locus (mean 1.240 vs. 1.297), lower percent polymorphic locus (24.0 vs. 29.7), and lower diversity (0.092 vs. 0.121) than a relatively widely spread species. An assessment of the proportion of diversity present within species, $H_{POP}/H_{SP}$, indicated that about 87.8% the total genetic diversity was among species. Thus, the majority of genetic variation (87.8%) resided within species. The phylogenic tree showed three distinct groups. One clade includes S. prunifolia for. simpliciflora, S. thunbergii, S. chamaedryfolia var. ulmifolia, S. media, and S. cantoniensis. Another clade includes S. blumei, S. pubescens, S. chartacea, and S. chinensis. The other clade is the remaining seven species.

EFFECTS OF SPIRAMINE ALKALOIDS ON THE PLATELET AGGREGATION

  • jiang, Hao-Xiao
    • Proceedings of the Korean Society of Applied Pharmacology
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    • 1998.11a
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    • pp.66-71
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    • 1998
  • Spiraea japonica L. F., a plant species belongs to the Spiraea genus of Rosaceae family, has seven varieties. There are all varieties distributed in Yunnan province of China, and S. japonica var. acuminata and S. japonica var. fortunei were used as the folk medicines to treat malaria and inflammation etc.. Since 1960s, Japanese and Russian scholars obtained C$\_$20/-diterpenoid alkaloids from S. japonica L.F., also Chinese scholars got a series of Hetisine-type C$\_$20/-diterpenoid alkaloids from S. japonica var. fortunei in 1985. Since then, we started the chemical and pharmaceutical studies of this complex. Here we wish to report the bioactive effects of spiramine alkaloids and their derivatives on the platelet aggregation induced by AA, PAF, or ADP.

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Effects of Plant Growth Regulators for Hard Wood and Cutting Time for Soft Wood on Rooting of Korean Native Spiraea spp. (숙지의 생장조절제 처리 및 녹지의 삽목시기가 한국 자생 조팝나무류의 발근에 미치는 영향)

  • Lee, Jeong Ho;Song, Cheon Young;Woo, Hyo Jin;Kwon, Oh Woung
    • FLOWER RESEARCH JOURNAL
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    • v.19 no.2
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    • pp.103-109
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    • 2011
  • This study was conducted to develop mass production method by proper cutting time, and the concentrations of plant growth regulators of Spiraea spp. Plants of hard wood was cut on March 3th, the rooting rate in S. salicifolia and S. cantoniensis was 11.3% comparatively higher than that about 5% in S. trichocarpa, S. miyabei, S. japonica, S. thunbergii and S. fritschiana. The rooting of control was 6.0%, however the $125{\sim}1,000mg{\cdot}L^{-1}$ IBA or NAA for 3 hour soaking was above 15.0% in the S. salicifolia. Therefore soaking in $125mg{\cdot}L^{-1}$ of IBA or NAA solution was recommended before cutting. The proper cutting time for soft wood from May 7 to September 17 in S. trichocarpa, S. cantoniensis, S. prunifolia, and S. thunbergii was September 17 when the soft stem was changed hard and the temperate was proper for rooting, high and low, $25{\pm}3^{\circ}C$ and $18{\pm}3^{\circ}C$. The rooting of September 17 was above 70% in S. salicifolia and S. fritschiana. However, the rooting from middle of May to early August was low below 20% in all the genus of Spiraea.

Vascular Plants of Gonamsan and Siribong in the Baekdudaegan (백두대간의 고남산과 시리봉 일대의 관속식물상)

  • 김용식;임동옥;오현경;고명회
    • Korean Journal of Environment and Ecology
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    • v.16 no.4
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    • pp.345-358
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    • 2003
  • The vascular plant species in the areas of Gonamsan and Shiribong in the Baekdudaegan were summarized as 295 texa: 89 families, 193 genus, 245 species, 44 varieties and 6 forms.10 taxa were recorded in the surveyed areas as the Korean endemic plants: Hosta capitat (Liliacease), Polygonatum lasianthum var. corenum (Liliaceae), Chloranthus japonicus (Cloranthaceae), Salix hulteni (Salicaoeae), Clematis richotoma (Ranunculaceae), Spiraea prunifolia for. simpliciflora (Rosaceae), Vicia unijuga (Fabaceae), Viola albida (Violaceae), cornus walter(Cornaceae), Weigela subsessilis (Caprifoliaceae).According to the list of Korean rare and endangered plants complied in the studied areas:Iris ensata var. spoyanea(Iridaceae), Viola albida (Vioaceae) and Aristolochia contorta (aristolochiaceae) Due to the rapid destruction and increase of visitors and the studied areas are located close to the villages, the naturalized plant species in the areas were more frequently appeared than the rare and endangered plant species.

Vascular Plants of Mt. Midong in Chungcheongbuk-do (충청북도 미동산의 관속식물상)

  • 유주한;진영희;장혜원;조흥원;한주환;이철희
    • Korean Journal of Environment and Ecology
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    • v.17 no.2
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    • pp.112-122
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    • 2003
  • This study was carried out to offer the raw data for the conservation of plant ecosystem in Chungcheongbuk-do with systematic grasping the vascular plant in Mt. Midong and to establish the accurate countermeasure of conservation on the rare species as well as to restore their habitats. The vascular plant species in Mt. Midong were summarized as 303 taxa; 81 families, 215 genus, 262 species, 38 varieties and 3 forms. The rare plants designated by Korea Forestry Service were two taxa; Polygonatum stenophyllum, Hylomecon hylomeconoides. The nine taxa were recorded in the surveyed sites as the endemic plants; Melandryum seoulense, Hylomecon hylomeconoides, Spiraea prunifolia for. simpliciflora, Filipendula palmata var. glabra, Ajuga spectabilis, Weigela subsessilis, Lonicera coreana, Cirsium setidens and Saussurea seoulensis. And the naturalized plants were twelve taxa; Rumex crispus, Lepidium apetalum, Robinia pseudo-acacia, Tyifolium pratense, Trifolium repens, Hibiscus trionum, Oenothera odorata, Ambrosia artemisifolia var. elatior, Erigeron annuus, Erigeron canadensis, Taraxacum officinale and Sonchus oleraceus.

The systematic implications of leaf micromorphological characteristics in the tribe Neillieae (Spiraeoideae, Rosaceae) (나도국수나무족(장미과) 잎 표피 미세형태학적 형질의 계통학적 유용성)

  • Song, Jun-Ho;Hong, Suk-Pyo
    • Korean Journal of Plant Taxonomy
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    • v.47 no.3
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    • pp.222-235
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    • 2017
  • A comparative study of the leaf epidermal micromorphology in the tribe Neillieae (Neillia: 4 species, 4 varieties; Physocarpus: 5 species; Stephanandra: 2 species) was carried out using scanning electron microscopy in order to evaluate the taxonomic and systematic implications of these characteristics. The leaves of the genera Neillia and Stephanandra were hypostomatic, whereas those of P. monogynus, P. opulifolius were amphistomatic. The range of the size of the stomata is $12.02-34.39{\times}10.76-27.13{\mu}m$; the smallest was found in N. thyrsiflora (average $13.98{\times}12.43{\mu}m$; $L{\times}W$), while the largest was measured in N. gracilis (average $26.82{\times}20.67{\mu}m$; $L{\times}W$). Paracytic stomata complexes are only found in N. affinis, and the anomocytic type was most commonly found. The papillate epidermal cell type was only observed on the abaxial surfaces of P. insularis. Platelet epicuticular waxes were found on the adaxial surfaces of N. affinis and S. tanakae. Four types (unicellular non-glandular, two- to five-armed, stellate, and glandular) of trichomes were found on the leaves. Stellates were observed in all species of Physocarpus except for P. insularis. Consequently, leaf epidermal micromorphological characteristics (e.g., the presence of papillate epidermal cells and stellate, and stomata complexes) may have high taxonomic and systematic value in Neillieae. Our results strongly support previous molecular phylogenetic and palynological hypotheses that Stephanandra and Neillia are a single genus and that Physocarpus insularis should be considered as a member of Spiraea.