• Title/Summary/Keyword: Genetic Research

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The Genetic Development of Sire, Dam and Progenies and Genotype ${\times}$ Environment Interaction in a Beef Breeding System

  • Bhuiyan, A.K.F.H.;Dietl, G.;Klautschek, G.
    • Asian-Australasian Journal of Animal Sciences
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    • v.17 no.1
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    • pp.13-17
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    • 2004
  • The aim of this study was to investigate genetic development and genotype${\times}$environment interactions (GEI) in postweaning body weight of fattening bulls at the end of test period (WT-T) under various beef fattening environments. Data on a total of 24,247 fattening bulls obtained from the industrial farm, breeding farms and testing stations were used. Heritability estimates for WT-T in all environments were nearly similar. Significant genetic developments of sire, dam and progenies for WT-T were observed in all environments. However, many differences in annual genetic developments between the environments were significant. The genetic correlations for WT-T between industrial farm and breeding farms, industrial farm and testing stations and breeding farms and testing stations were respectively 0.004, 0.004 and 0.013. These low estimates of genetic correlations and significant differences in genetic developments among environments clearly show the existence of GEI for WT-T among various fattening environments. Results of this study indicate the need for environment-specific genetic evaluation and selection of beef bulls for commercial beef production.

Genetic structure of Larimichthys polyactis (Pisces: Sciaenidae) in the Yellow and East China Seas inferred from microsatellite and mitochondrial DNA analyses

  • Kim, Jin-Koo;Min, Gi-Sik;Yoon, Moon-Geun;Kim, Yeong-Hye;Choi, Jung-Hwa;Oh, Taeg-Yun;Ni, Yong
    • Animal cells and systems
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    • v.16 no.4
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    • pp.313-320
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    • 2012
  • Genetic variation was surveyed at four microsatellite loci and 1416 base pairs (bp) of the mitochondrial DNA (mtDNA) cytochrome c oxidase I gene (COI) to clarify the genetic structure of the small yellow croaker, Larimichthys polyactis, in the Yellow and East China Seas, especially regarding four provisional populations, (one Korean and three Chinese populations). Based on microsatellite DNA variations, the estimated expected heterozygosity ($H_E$) in each population ranged from 0.776 to 0.947. The microsatellite pairwise $F_{ST}$ estimates showed no significant genetic differentiation between the populations. MtDNA variations also indicated no genetic structure in L. polyactis, but very high variability. The absence of genetic differentiation among and within populations of L. polyactis may either result from the random migration of the adult or the passive dispersal of the eggs and larvae.

Genetic Diversity and Genetic Structures in Ginseng Landraces (Cultivars) by SRAP Analysis (SRAP 분석에 의한 중국 재배삼의 유전적 다양성)

  • Xu, Young Hua;Jin, Hui;Kim, Young-Chang;Bang, Kyong-Hwan;Cha, Seon-Woo;Zhang, Lian Xue
    • Korean Journal of Medicinal Crop Science
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    • v.18 no.3
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    • pp.180-185
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    • 2010
  • We investigated genetic diversity among and within the populations of cultivated ginseng (Panax ginseng C. A. Meyer ) using SRAP profiles. A total of 24 ginseng plants were sampled from the three populations (two from China, one from Korea). Since all these populations are previously shown closely related to each other assister groups, we used Panax quinquefolium L. and wild ginseng as a reference species, which is not "within the sister group". All individuals from the three populations were screened with a total of 36 primer pairs with 26 primers generated from 328 SRAP bands of DNA gels. The mean gene diversity ($H_E$) was estimated to be 0.057 within populations (range 0.032-0.067), and 0.086 at the species level. The genetic differentiation (Gst=0.31) indicates that genetic variation apportioned 30% among populations and 70% within populations. Generally, the result of this study indicates that ginseng contains high molecular variation in its populations.

Genetic Diversity Analysis of Maintaining Lines for Kenyan Sunflower (Helianthus annus L.) Using Allele Specific SSR Markers

  • Mwangi, Esther W.;Lee, Myung-Chul;Sung, Jung Suk;Marzougui, Salem;Bwalya, Ernest C.
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2019.04a
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    • pp.61-61
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    • 2019
  • In any crop breeding program Selection and use of genetically diverse genotypes to develop cultivars with a broad genetic base is important. Molecular markers play a major role in selecting diverse genotypes. Molecular breeding programs of the crop can be made more efficient by use of molecular markers. The present study was done with an aim of analyzing genetic diversity and the population structure in 24 accessions of sunflower (Helianthus annus L.) from Kenya genetic diversity using 35 EST-SSR and gSSR primers.Out of the 35 markers 3 were not polymorphic as they indicated Polymorphic Information content( PIC) of value 0.00 and so the data analysis was done using 32 markers . The 32 set of markers used produced 29 alleles ranging from 2 to 7with a mean of 3.0 alleles per locus.The average value of polymorphic information contents(PIC) were 0.3 .Genetic diversity analysis using these markers revealed 3 major clusters. This result could be useful for designing strategies to make elite hybrid and inbreeding of crossing block for breeding and future molecular breeding programs to make elite variety.

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Cloning and Sequencing of a Gene Cluster for the Resistance to Doxorubicin from Streptomyces peucetius subsp. caesius ATCC 27952

  • Hong, Young-Soo;Hwang, Cheol-Kyu;Hwang, Dong-Youn;Kim, Young-Ho;Kim, Sung-Jun;Lee, Jung-Joon
    • Journal of Microbiology and Biotechnology
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    • v.2 no.3
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    • pp.153-160
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    • 1992
  • The doxorubicin resistance locus from Streptomyces peucetius subsp. caesius (the doxorubicin producer, ATCC 27952) has been cloned. The sequence data over 4.4 kb regions reveals the presence of four possible open reading frames (ORFs). ORF2 and ORF3 would encode proteins containing 329 and 283 amino acids, respectively. The protein encoded by ORF2 has two almost identical ATP binding domains with p-glycoprotein, the product of a multidrug resistance gene from tumor cells, and that encoded by ORF3 has several hydrophobic domains suggesting that it is located in the bacterial membrane. These two remarkable similarities of the gene product to p-glycoprotein of mammalian tumor cells suggest that the two proteins may enable bacteria to extrude a variety of toxic agents, including daunorubicin and doxorubicin, by an ATP dependent efflux mechanism analogous to the multidurg resistance protein of cancer cells.

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Assessment of Genetic Diversity, Relationships and Structure among Korean Native Cattle Breeds Using Microsatellite Markers

  • Suh, Sangwon;Kim, Young-Sin;Cho, Chang-Yeon;Byun, Mi-Jeong;Choi, Seong-Bok;Ko, Yeoung-Gyu;Lee, Chang Woo;Jung, Kyoung-Sub;Bae, Kyoung Hun;Kim, Jae-Hwan
    • Asian-Australasian Journal of Animal Sciences
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    • v.27 no.11
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    • pp.1548-1553
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    • 2014
  • Four Korean native cattle (KNC) breeds-Hanwoo, Chikso, Heugu, and Jeju black-are entered in the Domestic Animal Diversity Information System of the United Nations Food and Agriculture Organization (FAO). The objective of this study was to assess the genetic diversity, phylogenetic relationships and population structure of these KNC breeds (n = 120) and exotic breeds (Holstein and Charolais, n = 56). Thirty microsatellite loci recommended by the International Society for Animal Genetics/FAO were genotyped. These genotypes were used to determine the allele frequencies, allelic richness, heterozygosity and polymorphism information content per locus and breed. Genetic diversity was lower in Heugu and Jeju black breeds. Phylogenetic analysis, Factorial Correspondence Analysis and genetic clustering grouped each breed in its own cluster, which supported the genetic uniqueness of the KNC breeds. These results will be useful for conservation and management of KNC breeds as animal genetic resources.

Production of Superior Cows by Sexed Embryo Transfer Using In Vivo Embryos in Hanwoo (한우 체내수정란의 성판별 후 이식으로 우수 암송아지 생산)

  • Son D. S.;Cho S. R.;Choe C. Y.;Choi S. H.;Han M. H.;Kim H. J.;Cho C. Y.;Jean H. J.;Kim Y. K.;Jeoung Y. G.;Saito N.;Kageyama S.;Choe S. Y.
    • Journal of Embryo Transfer
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    • v.20 no.2
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    • pp.163-168
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    • 2005
  • The objective of this study was to produce superior cows by sexual distinction of embryos collected from the donor with pedigree information. Collected embryos distinguished by biopsy using punching or bisection methods and Loop-mediated isothermal amplification of sex-determined DNA for sexing. Six embryos predicted as female were transplanted to recipients and then 2 pregnant cows were normally delivered of calves at 278 and 285 days after embryo transfer. Birth weights of calves named Barani and Borani were 18kg and 25kg, respectively. Adjusted body weights for 90 days were 61.1kg and 88.8kg, respectively. Average daily gains were 0.48kg and 0.71kg, respectively.

Occurrence and identification of genetic variation and variation continuity in strawberry tissue culture caused by benzyladenine treatment (딸기 조직배양 시 BA (benzyladenine) 처리에 따른 변이 발생 및 변이 연속성 검정)

  • Kim, Hye Jin;Choi, Mi Ja;Lee, Jong Nam;Suh, Jong Taek;Kim, Ki Deog;Kim, Yul Ho;Hong, Su Young;Kim, Su Jeong;Sohn, Hwang Bae;Nam, Jeong Hwan
    • Journal of Plant Biotechnology
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    • v.47 no.1
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    • pp.46-52
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    • 2020
  • This experiment study aimed to identify the continuous genetic variation caused by benzyladenine (BA) treatment in strawberry tissue culture. The 'Goha' cultivar was used and treated with different concentrations of BA (0.0, 0.5, 1.0, 2.0 mg·L-1). Morphological and genetic variation tests were performed, and genetic continuity tests were performed for three years. The morphological variation induced by BA was distinctively high (10.5 ~ 20.0%) and the genetic variation was 7.0 ~ 15.0%, 1.8 ~ 10.0%, and 5.0% in the first, second, and third year of cultivation, respectively. The rate of genetic variation decreased with increasing cultivation years. In addition, genetic variation caused by BA 1.0 mg·L-1 and BA 2.0 mg·L-1 occurred in the first and second years of cultivation, whereas only BA 2.0 mg·L-1 caused genetic variation in the third year of cultivation. Therefore, a concentration of less than 1.0 mg·L-1 BA was used for the propagation of strawberry tissue culture plants, and it was necessary to identify their variation.

A preliminary study of genetic structure and relatedness analysis of Nutria (Myocastor coypus) in Upo Wetland

  • Jung, Jongwoo;Jo, Yeong-Seok
    • Journal of Species Research
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    • v.1 no.1
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    • pp.100-103
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    • 2012
  • Nutria Myocastor coypus is one of a well known invasive riparian mammal found species around world from North America to Eurasia and Africa. In South Korea, feral nutrias inhabit areas from the Nakdonggang and Namgang (River) to their tributaries and Upo Wetland where they have had devastating effects on environment. Nevertheless, there has been little research about nutrias in Korea. This study is to analyze the genetic structure of the nutria population in the Upo Wetland and identify the origin of the source populations. Twenty individuals from the Upo Wetland were genotyped using 25 microsatellite loci. When compared with another introduced population, that of the Blackwater Nation Wildlife Refuge in U.S., the Upo population contains considerable genetic variations. Tests for Hardy-Weinberg equilibrium and Bayesian clustering analysis suggest the Upo population is genetically structured and has at least two source populations. This preliminary study presents the need for further in-depth studies about this species which should combine genetic and ecological studies.