• Title/Summary/Keyword: GK2A

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Novel $\alpha$-Glucosidase from Extreme Thermophile Thermus caldophilus GK24

  • Nashiru, Oyekanmi;Koh, Suk-Hoon;Lee, Se-Yong;Lee, Dae-Sil
    • BMB Reports
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    • v.34 no.4
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    • pp.347-354
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    • 2001
  • $\alpha$-Glucosidase of an extreme thermophile, Thermus caldophilus GK24 (TcaAG), was purified 80-fold from cells to a homogeneous state and characterized. The enzyme exhibited optimum activity at pH 6.5 and $90^{\circ}C$, and was stable from pH 6.0 to 85 and up to $90^{\circ}C$. The enzyme had a half-life of 85 minutes at $90^{\circ}C$. An analysis of the substrate specificity showed that the enzyme hydrolyzed the non-reducing terminal unit of $\alpha$-1,6-glucosidic linkages of isomaltosaccharides and panose, $\alpha$-1,3-glycosidic bond of nigerose and turanose, and $\alpha$-1,2-glycosidic bond of sucrose. The gene encoding the TcaAG was cloned, sequenced, and sequenced in E. coli. The nucleotide sequence of the gene encoded a 530 amino acid polypeptide and had a G+C content of 68.4% with a strong bias for G or C in the third position of the codons (93.6%). A sequence analysis revealed that TcaAG belonged to the $\alpha$-amylase family. We suggest that this monomeric, thermostable, and broad-acting $\alpha$-glucosidase is a departure from previously exhibited specificities. It is, therefore, a novel $\alpha$-glucosidase.

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Amino Silane, Vinyl Silane, TESPD, ZS (TESPD/Zinc Complex) Effects on Carbon Black/Clay Filled Chlorobutyl Rubber (CIIR) Compounds Part III: Comparative Studies on Hard Clay and Soft Clay Filled Compounds

  • Kim, Kwang-Jea
    • Carbon letters
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    • v.10 no.3
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    • pp.190-197
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    • 2009
  • Various silanes, amino silane, vinyl silane, sulfur silane (TESPD), and ZS (TESPD/zinc soap complex), are added into chlorinated isobutylene-isoprene copolymer (CIIR)/soft clay/carbon black (CB) and CIIR/hard clay/CB compounds and they are investigated with respect to the vulcanization characteristics, the processability, and the mechanical properties. Comparing hard clay and soft clay filled compounds, hard clay (Suprex) filled system shows a higher die C tear than the soft clay (GK) filled one. The other properties (Mooney, extrusion torque/pressure, torque rise ($M_H-M_L$), modulus at 300%) are close to each other. Among various silanes, the ZS treated hard clay (Suprex) compound shows the highest mechanical property following hard clay(S)/vinyl silane(V) and soft clay(GK)/vinyl silane(V) compounds. The TESPD and the ZS effectively helps a formation of a strong 3-dimensional network structure between silica and CIIR via coupling reaction due to bifunctional nature of TESPD. In addition to that, the ZS added compounds show both a better processability and mechanical properties compared to the S2 ones at low concentration due to improved compatibility between zinc soap and CIIR matrix. Only the ZS added compound shows both improved processabilities (Mooney, Extrusion torque-& pressure) and improved mechanical properties (degree of crosslinking, elongation modulus, tear, and fatigue to failure counts) on both CIIR/hard clay/CB and CIIR/soft clay/CB compounds.

Current Status and Results of In-orbit Function, Radiometric Calibration and INR of GOCI-II (Geostationary Ocean Color Imager 2) on Geo-KOMPSAT-2B (정지궤도 해양관측위성(GOCI-II)의 궤도 성능, 복사보정, 영상기하보정 결과 및 상태)

  • Yong, Sang-Soon;Kang, Gm-Sil;Huh, Sungsik;Cha, Sung-Yong
    • Korean Journal of Remote Sensing
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    • v.37 no.5_2
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    • pp.1235-1243
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    • 2021
  • Geostationary Ocean Color Imager 2 (GOCI-II) on Geo-KOMPSAT-2 (GK2B)satellite was developed as a mission successor of GOCI on COMS which had been operated for around 10 years since launch in 2010 to observe and monitor ocean color around Korean peninsula. GOCI-II on GK2B was successfully launched in February of 2020 to continue for detection, monitoring, quantification, and prediction of short/long term changes of coastal ocean environment for marine science research and application purpose. GOCI-II had already finished IAC and IOT including early in-orbit calibration and had been handed over to NOSC (National Ocean Satellite Center) in KHOA (Korea Hydrographic and Oceanographic Agency). Radiometric calibration was periodically conducted using on-board solar calibration system in GOCI-II. The final calibrated gain and offset were applied and validated during IOT. And three video parameter sets for one day and 12 video parameter sets for a year was selected and transferred to NOSC for normal operation. Star measurement-based INR (Image Navigation and Registration) navigation filtering and landmark measurement-based image geometric correction were applied to meet the all INR requirements. The GOCI2 INR software was validated through INR IOT. In this paper, status and results of IOT, radiometric calibration and INR of GOCI-II are analysed and described.

Machine Learning-Based Atmospheric Correction Based on Radiative Transfer Modeling Using Sentinel-2 MSI Data and ItsValidation Focusing on Forest (농림위성을 위한 기계학습을 활용한 복사전달모델기반 대기보정 모사 알고리즘 개발 및 검증: 식생 지역을 위주로)

  • Yoojin Kang;Yejin Kim ;Jungho Im;Joongbin Lim
    • Korean Journal of Remote Sensing
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    • v.39 no.5_3
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    • pp.891-907
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    • 2023
  • Compact Advanced Satellite 500-4 (CAS500-4) is scheduled to be launched to collect high spatial resolution data focusing on vegetation applications. To achieve this goal, accurate surface reflectance retrieval through atmospheric correction is crucial. Therefore, a machine learning-based atmospheric correction algorithm was developed to simulate atmospheric correction from a radiative transfer model using Sentinel-2 data that have similarspectral characteristics as CAS500-4. The algorithm was then evaluated mainly for forest areas. Utilizing the atmospheric correction parameters extracted from Sentinel-2 and GEOKOMPSAT-2A (GK-2A), the atmospheric correction algorithm was developed based on Random Forest and Light Gradient Boosting Machine (LGBM). Between the two machine learning techniques, LGBM performed better when considering both accuracy and efficiency. Except for one station, the results had a correlation coefficient of more than 0.91 and well-reflected temporal variations of the Normalized Difference Vegetation Index (i.e., vegetation phenology). GK-2A provides Aerosol Optical Depth (AOD) and water vapor, which are essential parameters for atmospheric correction, but additional processing should be required in the future to mitigate the problem caused by their many missing values. This study provided the basis for the atmospheric correction of CAS500-4 by developing a machine learning-based atmospheric correction simulation algorithm.

Assessment of airborne bioaerosols among different areas in the hospitals (일부 종합병원 내 영역별 공기 중 미생물 평가)

  • Cho, HyunJong;Hong, KyungSim;Kim, JiHoon;Kim, HyunWook
    • Journal of Korean Society of Occupational and Environmental Hygiene
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    • v.10 no.1
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    • pp.115-125
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    • 2000
  • Three major hospitals with over 500 beds located in and near Seoul were surveyed for airbone microorganisms from February 1, 1998 to February 18, 1998. The purpose of the study was to identify and quantify microbiological organisms circulating in the air of three different areas in the hospitals. For the study, a RCS air sampler was utilized equipped with two different collection media, the agar strip GK-A for bacteria and the agar strip HS for fungi. The areas investigated were the intensive care unit (ICU) in the Department of internal medicine, the Newborns room in the Department of Obstetrics, and the microbiology laboratory. The results were as follows; 1. The average numbers of general microbiological particles collected on the agar strip GK-A media were $205CFU/m^3$, $232CFU/m^3$, and $128CFU/m^3$ in each hospitals. The highest concentration of $387CFU/m^3$ was found in the ICU of A hospital at 15:00 during the day. Further analysis of the collected bioaerosols by gram staining, revealed that there were gram positive cocci (89.5%), gram positive bacilli (7.2%), gram negative bacilli (2.8%), and fungi (0.5%), in descending order of frequency. 2. Ten different genes were identified from the agar strip GK-A. The most frequently identified organisms were: the Coagulase negative staphylococcus (55.0%), Micrococcus (21.4%), Enterococcus species(10.4%), and Bacillus species (7.2%). A series of antibiotics susceptibility test were conducted against the aforementioned four(4) organisms. Ninety percent of coagulase negative stapylococcus were sensitive to Penicillins. Pathogenic microbes isolated include: Staphylococcus aureus, Acinetobacter species, Klebsiella pneumonia, Klebsiella oxytoca, and Pseudomonas aeroginosa. 3 Although 56.8% of the microorganisms grown on the strip HS media for fungi could not be identified, some of them were successfully identified. The most frequently found fungi were Aspergillus (35.3%), Yeast or Molds (6.2%), and Penicillium (0.7%). Based on the results obtained from the study, it was concluded that some areas in the hospitals had abnormally high bioaerosol concentrations which could be attributed to human activity. Therefore, it is recommended that periodic assessments of indoor bioaerosols aiming to identify the possible sources should be conducted in order to maintain clean indoor environment in the hospitals.

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Wildfire Risk Index Using NWP and Satellite Data: Its Development and Application to 2019 Kangwon Wildfires (기상예보모델자료와 위성자료를 이용한 산불위험지수 개발 및 2019년 4월 강원 산불 사례에의 적용)

  • Kim, Yeong-Ho;Kong, In-Hak;Chung, Chu-Yong;Shin, Inchul;Cheong, Seonghoon;Jung, Won-Chan;Mo, Hee-Sook;Kim, Sang-Il;Lee, Yang-Won
    • Korean Journal of Remote Sensing
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    • v.35 no.2
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    • pp.337-342
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    • 2019
  • This letter describes the development of WRI (Wildfire Risk Index) using GDAPS (Global Data Assimilation and Prediction System) and satellite data, and its application to the Goseong-Sokcho and Gangneung-Donghae wildfires in April 4, 2019. We made sure that the proposed WRI represented the change of wildfire risk of around March 19 and April 4 very well. Our approach can be a viable option for wildfire risk monitoring, and future works will be necessary for the utilization of GK-2A products and the coupling with the wildfire prediction model of the Korea Forest Service.

Sympatry and Species Status of Momco Jagowskii and M oxycephalus (Cyprirndae) (버들개(Moroco lagowskii)와 버들치(M.oxcephalus)의 동서지역 분석 및 종 문제에 관하여)

  • 양서영;민미숙
    • The Korean Journal of Zoology
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    • v.31 no.1
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    • pp.56-61
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    • 1988
  • The taxonomic status of Moroco Jagowskii and M oxycephalus a pair of sibling species inhabiting in Korean fresh waters, has been unclear up to date. Recently a sympatric area of these species was found (Kang, 1987). The purpose of this study was to clarify their specific status by analysing specimens collected from the sympatric area of these species. Isozyme analysis and morphometric comparison were performed. Among 26 loci screened 6 loci (Aco, Est-2, E-X, Gk-3, Ipo, Me) showed fixed allelic difference between them and these loci could be used as genetic markers to distinguish them. Isozyme analysis indicates that no hybridization occurs and therefore it is assumed that isolating mechanism is completed and they are distinct species. The mean number of scales above lateral line (SAL) of M Jagowskii and M oxycephalus at sympatric area was 24.93 $\pm$1.95 and 17.33$\pm$0.72 respectively, and it seems as the result of character displacement. A finer microhabitat segregation between them is noticed. M oxycephalus is found along the effluent streams whereas M lagowskii is distributed mostly in the main stream at sympatric area.

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Spatial Gap-Filling of Hourly AOD Data from Himawari-8 Satellite Using DCT (Discrete Cosine Transform) and FMM (Fast Marching Method)

  • Youn, Youjeong;Kim, Seoyeon;Jeong, Yemin;Cho, Subin;Kang, Jonggu;Kim, Geunah;Lee, Yangwon
    • Korean Journal of Remote Sensing
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    • v.37 no.4
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    • pp.777-788
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    • 2021
  • Since aerosol has a relatively short duration and significant spatial variation, satellite observations become more important for the spatially and temporally continuous quantification of aerosol. However, optical remote sensing has the disadvantage that it cannot detect AOD (Aerosol Optical Depth) for the regions covered by clouds or the regions with extremely high concentrations. Such missing values can increase the data uncertainty in the analyses of the Earth's environment. This paper presents a spatial gap-filling framework using a univariate statistical method such as DCT-PLS (Discrete Cosine Transform-based Penalized Least Square Regression) and FMM (Fast Matching Method) inpainting. We conducted a feasibility test for the hourly AOD product from AHI (Advanced Himawari Imager) between January 1 and December 31, 2019, and compared the accuracy statistics of the two spatial gap-filling methods. When the null-pixel area is not very large (null-pixel ratio < 0.6), the validation statistics of DCT-PLS and FMM techniques showed high accuracy of CC=0.988 (MAE=0.020) and CC=0.980 (MAE=0.028), respectively. Together with the AI-based gap-filling method using extra explanatory variables, the DCT-PLS and FMM techniques can be tested for the low-resolution images from the AMI (Advanced Meteorological Imager) of GK2A (Geostationary Korea Multi-purpose Satellite 2A), GEMS (Geostationary Environment Monitoring Spectrometer) and GOCI2 (Geostationary Ocean Color Imager) of GK2B (Geostationary Korea Multi-purpose Satellite 2B) and the high-resolution images from the CAS500 (Compact Advanced Satellite) series soon.

Validation on Solar-array Drive Assembly of GEO-KOMPSAT-2A Through In-orbit Operation (천리안2A호 태양전지판구동기 궤도상 운영 검증)

  • Park, Young-Woong;Park, Keunjoo;Park, Bong-Kyu
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.47 no.4
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    • pp.283-288
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    • 2019
  • In this paper, there is summarized the validation of ground test results through the telemetry acquired during on-orbit initial activation on solar-array drive assembly(SDA) of GK2A launched at Dec-5, 2018. Especially, the decision logic of SDA initial position and the compensation logic are validated and confirmed. The SDA initial position is needed when GK2A enter to geostationary orbit from transfer orbit and the compensation logic is for the accumulated position error due to the open-loop control. Up to now, it is normal operating. Also the periodic offset between the geostationary orbit and Sun position is found that it is not checked on design phase, and then the proper threshold value is applied.

A Specific Pullulanase for ${\alpha}$-1,6-Glucosidic Linkage of Glucan from Thermus caldophilus

  • Moon-Jo Lee;June-Ki Kim;Kyung-Soo Nam;Jin-Woo Park;Cher-Won Hwang;Dong-Soo Kim;Cheorl-Ho Kim
    • Journal of Life Science
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    • v.9 no.1
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    • pp.26-34
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    • 1999
  • A thermostable pullulanase has been isolated and purified from Thermus caldophilus GK-24 to a homogeneity by gel-filtration and ion-exchange chromatography. The specific activity of the purified enzyme was 431-fold increase from the crude culture broth with a recovery of 11.4%. The purified enzyme showed $M_{r}$ of 65 kDa on denaturated and natural conditions. The pI of the enzyme was 6.1 and Schiff staining was negative, suggesting that the enzyme is not a glycoprotein. The enzyme was most active at pH 5.5. The activity was maximal at $75^{\cire}C$ and stable up to $95^{\cire}C$ for 30 min at pH 5.5. The enzyme was stable to incubation from pH 3.5 to pH 8.0 at $4^{\cire}C$ for 24hr. The presence of pullulan protected the enzyme from heat inactivation, the extent depending upon the substrate concentration. The activity of the enzyme was simulated by $Mn^{2+}$ ion, }$Ni^{2+}$, $Ca^{2+}$, $Co^{2+}$ ions. The enzyme hydrolyzed the ${\alpha}$-1,6-linkages of amylopectin, glycogens, ${\alpha}$, ${\beta}$-limited dextrin, and pullulan. The enzyme caused the complete hydrolysis of pullulan to maltotriose and the activity was inhibited by $\alpha$, $\beta$, or $\gamma$-cyclodextrins. The $NH_{2}$-terminal amino acid sequence [(Ala-Pro-Gln-(Asp of Tyr)-Asn-Leu-Leu-Xaa-ILe-Gly-Ala(Ser)] was compared with known sequences of various sources and that was compared with known sequences of various sources and that was different from those of bacterial and plant enzymes, suggesting that the enzymes are structurally different.

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