• Title/Summary/Keyword: GBIF

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Construction of KBIF Data Node (KBIF 데이터 노드 구축)

  • 안성수;양진호;권창혁;박형선
    • Proceedings of the Korean Information Science Society Conference
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    • 2004.10b
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    • pp.280-282
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    • 2004
  • 국제생물다양성정보기구(GBIF)는 전세계의 생물다양성데이터베이스를 네트워크로 연결하고 인터넷을 통한 서비스를 제공하여 생물다양성데이터가 자유롭게 널리 이용될 수 있는 임무를 수행하고 있다. 한국에서는 KISTI가 국가중점노드 역할을 수행하면서 생물다양성데이터 보유기관에 데이터노드 구축 관련 기술과 소프트웨어를 보급하고 있고 현재 한국에서는 2개의 데이터 노드가 구축되어 GBIF의 데이터 포털과 연결되어 있다. 본 논문에서는 GBIF의 생물다양성데이터를 교환하기 위해서 필요한 데이터 표준 프로토콜, 관련 소프트웨어를 소개하고 데이터 노드 구축 방법을 소개하고 생물다양성데이터의 응용 방법에 대친 논의한다.

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Status and Quality Analysis on the Biodiversity Data of East Asian Vascular Plants Mobilized through the Global Biodiversity Information Facility (GBIF) (세계생물다양성정보기구(GBIF)에 출판된 동아시아 관속식물 생물다양성 정보 현황과 자료품질 분석)

  • Chang, Chin-Sung;Kwon, Shin-Young;Kim, Hui
    • Journal of Korean Society of Forest Science
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    • v.110 no.2
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    • pp.179-188
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    • 2021
  • Biodiversity informatics applies information technology methods in organizing, accessing, visualizing, and analyzing primary biodiversity data and quantitative data management through the scientific names of accepted names and synonyms. We reviewed the GBIF data published by China, Japan, Taiwan, and internal institutes, such as NIBR, NIE, and KNA of the Republic of Korea, and assessed data in diverse aspects of data quality using BRAHMS software. Most data from four Asian countries have quality problems with the lack of data consistency and missing information on georeferenced data, collectors, collection date, and place names (gazetteers) or other invalid data forms. The major problem is that biodiversity management institutions in East Asia are using unstructured databases and simple spreadsheet-type data. Owing to the nature of the biodiversity information, if data relationships are not structured, it would be impossible to secure the data integrity of scientific names, human names, geographical names, literature, and ecological information. For data quality, it is essential to build data integrity for database management and training systems for taxonomists who are continuous data managers to correct errors. Thus, publishers in East Asia play an essential role not only in using specialized software to manage biodiversity data but also in developing structured databases and ensuring their integration and value within biodiversity publishing platforms.

해양생물 유전자은행 구축 및 운영체계

  • Lee, Hong-Geum
    • Journal of Scientific & Technological Knowledge Infrastructure
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    • s.10
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    • pp.70-75
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    • 2002
  • 우리나라는 생물다양성협약(CBD, Convention on Biological Diversity)의 당사국뿐만 아니라 2001년 5월 국제생물다양성정보기구(GBIF, Global Biodiversity Information Facility)에 투표회원국으로 가입하게됨으로써 국가적 차원의 생물다양성정보 전담기구(National Node)의 지정이 표면화되었고 국내 산재한 관련 DB의 통합, 관련 연구에 집중 및 범세계적 차원으로 대응해야하는 의무가 부여되었다.

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Spatial Assessment of Climate Suitability for Summer Cultivation of Potato in North Korea (기후적합도 모형을 활용한 북한지역 내 감자의 여름재배 적지 탐색)

  • Kang, Minju;Hyun, Shinwoo;Kim, Kwang Soo
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.24 no.1
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    • pp.35-47
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    • 2022
  • Expansion of potato production areas can improve the food security in North Korea because the given crop has less requirements for agricultural materials and facilities. The Global Agro-Ecological Zones (GAEZ) model, which was developed to evaluate climate suitability under different cultivation conditions, was used to identify potential areas for the potato production. The spatial estimates of crop suitability under low and high input management conditions were downloaded from the GAEZ data portal. The values of suitability were obtained at the potato occurrence sites retrieved from the Global Biodiversity Information Facility (GBIF) database. The suitable areas for the potato production were identified using a threshold value derived from the suitability estimates at the occurrence sites. It was found that 90% of the occurrence sites had the suitability index value >3,333, which was set to be the threshold value. The suitable areas in North Korea were summarized by province and county. Rice cultivation areas were excluded from the analysis. The reported relative acreage of potato production was better represented by the suitable areas under the low input management options than the high input conditions. The suitable areas also had a similar distribution to the reported acreage of potato production by county. These results indicated that the GAEZ model would be useful to identify the candidate production areas, which would facilitate the increases in potato production especially under future climate conditions. Furthermore, monthly maps of crop suitability can be used to design cropping systems that would improve crop production under the limited use of agricultural materials and facilities.

Predicting the Potential Distribution of an Invasive Species, Solenopsis invicta Buren (Hymenoptera: Formicidae), under Climate Change using Species Distribution Models

  • SUNG, Sunyong;KWON, Yong-Su;LEE, Dong Kun;CHO, Youngho
    • Entomological Research
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    • v.48 no.6
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    • pp.505-513
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    • 2018
  • The red imported fire ant is considered one of the most notorious invasive species because of its adverse impact on both humans and ecosystems. Public concern regarding red imported fire ants has been increasing, as they have been found seven times in South Korea. Even if red imported fire ants are not yet colonized in South Korea, a proper quarantine plan is necessary to prevent their widespread distribution. As a basis for quarantine planning, we modeled the potential distribution of the red imported fire ant under current climate conditions using six different species distribution models (SDMs) and then selected the random forest (RF) model for modeling the potential distribution under climate change. We acquired occurrence data from the Global Biodiversity Information Facility (GBIF) and bioclimatic data from WorldClim. We modeled at the global scale to project the potential distribution under the current climate and then applied models at the local scale to project the potential distribution of the red imported fire ant under climate change. Modeled results successfully represent the current distribution of red imported fire ants. The potential distribution area for red imported fire ants increased to include major harbors and airports in South Korea under the climate change scenario (RCP 8.5). Thus, we are able to provide a potential distribution of red imported fire ant that is necessary to establish a proper quarantine plan for their management to minimize adverse impacts of climate change.

Predicting the Potential Habitat and Future Distribution of Brachydiplax chalybea flavovittata Ris, 1911 (Odonata: Libellulidae) (기후변화에 따른 남색이마잠자리 잠재적 서식지 및 미래 분포예측)

  • Soon Jik Kwon;Yung Chul Jun;Hyeok Yeong Kwon;In Chul Hwang;Chang Su Lee;Tae Geun Kim
    • Journal of Wetlands Research
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    • v.25 no.4
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    • pp.335-344
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    • 2023
  • Brachydiplax chalybea flavovittata, a climate-sensitive biological indicator species, was first observed and recorded at Jeju Island in Korea in 2010. Overwintering was recently confirmed in the Yeongsan River area. This study was aimed to predict the potential distribution patterns for the larvae of B. chalybea flavovittata and to understand its ecological characteristics as well as changes of population under global climate change circumstances. Data was collected both from the Global Biodiversity Information Facility (GBIF) and by field surveys from May 2019 to May 2023. We used for the distribution model among downloaded 19 variables from the WorldClim database. MaxEnt model was adopted for the prediction of potential and future distribution for B. chalybea flavovittata. Larval distribution ranged within a region delimited by northern latitude from Jeju-si, Jeju Special Self-Governing Province (33.318096°) to Yeoju-si, Gyeonggi-do (37.366734°) and eastern longitude from Jindo-gun, Jeollanam-do (126.054925°) to Yangsan-si, Gyeongsangnam-do (129.016472°). M type (permanent rivers, streams and creeks) wetlands were the most common habitat based on the Ramsar's wetland classification system, followed by Tp type (permanent freshwater marshes and pools) (45.8%) and F type (estuarine waters) (4.2%). MaxEnt model presented that potential distribution with high inhabiting probability included Ulsan and Daegu Metropolitan City in addition to the currently discovered habitats. Applying to the future scenarios by Intergovernmental Panel on Climate Change (IPCC), it was predicted that the possible distribution area would expand in the 2050s and 2090s, covering the southern and western coastal regions, the southern Daegu metropolitan area and the eastern coastal regions in the near future. This study suggests that B. chalybea flavovittata can be used as an effective indicator species for climate changes with a monitoring of their distribution ranges. Our findings will also help to provide basic information on the conservation and management of co-existing native species.

Habitat characteristics and prediction of potential distribution according to climate change for Macromia daimoji Okumura, 1949 (Odonata: Macromiidae) (노란잔산잠자리(Macromia daimojiOkumura, 1949)의 서식지 특성 및 기후변화에 따른 잠재적 분포 예측)

  • Soon Jik Kwon;Hyeok Yeong Kwon;In Chul Hwang;Chang Su Lee;Tae Geun Kim;Jae Heung Park;Yung Chul Jun
    • Journal of Wetlands Research
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    • v.26 no.1
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    • pp.21-31
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    • 2024
  • Macromia daimoji Okumura, 1949 was designated as an endangered species and also categorized as Class II Endangered wildlife on the International Union for Conservation of Nature (IUCN) Red List in Korea. The spatial distribution of this species ranged within a region delimited by northern latitude from Sacheon-si(35.1°) to Yeoncheon-gun(38.0°) and eastern longitude from Yeoncheon-gun(126.8°) to Yangsan-si(128.9°). They generally prefer microhabitats such as slowly flowing littoral zones of streams, alluvial stream islands and temporarily formed puddles in the sand-based lowland streams. The objectives of this study were to analyze the similarity of benthic macroinvertebrate communities in M. daimoji habitats, to predict the current potential distribution patterns as well as the changes of distribution ranges under global climate change circumstances. Data was collected both from the Global Biodiversity Information Facility (GBIF) and by field surveys from April 2009 to September 2022. We adopted MaxEnt model to predict the current and future potential distribution for M. daimoji using downloaded 19 variables from the WorldClim database. The differences of benthic macroinvertebrate assemblages in the mainstream of Nakdonggang were smaller than those in its tributaries and the other streams, based on the surrounding environments and stream sizes. MaxEnt model presented that potential distribution displayed high inhabiting probability in Nakdonggang and its tributaries. Applying to the future scenarios by Intergovernmental Panel on Climate Change (IPCC), SSP1 scenario was predicted to expand in a wide area and SSP5 scenario in a narrow area, comparing with current potential distribution. M. daimoji is not only directly threatened by physical disturbances (e.g. river development activities) but also vulnerable to rapidly changing climate circumstances. Therefore, it is necessary to monitor the habitat environments and establish conservation strategies for preserving population of M. daimoji.