• Journal of the Korean Society of Fisheries and Ocean Technology
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• v.46 no.2
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• pp.126-138
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• 2010

To investigate seasonal variation of fisheries resources composition and their correlationships with environmental factors in the coastal ecosystem of the middle Yellow Sea of Korea, shrimp beam trawl were carried out for the fisheries survey. Fisheries resources of 81 species, 57 families, and 6 taxa totally were collected by shrimp beam trawl in the middle coastal ecosystem of Yellow Sea of Korea. Species were included 6 species in Bivalvia, 6 in Cephalopoda, 22 in Crustacea, 2 in Echinodermata, 5 in Gastropoda, and 40 in Pisces. Diversity indices (Shannon index, H') showed seasonal variation with low value of 2.14 in winter, and high value of 2.67 in spring. Main dominant species were Oratosquilla oratoria, Octopus ocellatus, Acanthogobius lactipes, Cynoglossus joyneri, Rapana venosa venosa, Loligo beka, Chaeturichthys stigmatias, Raja kenojei, Microstomus achne and Paralichthys olivaceus, that were occupied over 58% of total individuals, and 55% of wet weight. Fisheries organism made four coordinative seasonal groups by the principal component analysis (PCA), showing stronger seasonal variation than spatial variation. PC from PCA showed statistically significant cross-correlationships with seawater temperature, $NH_4$-N, TP and chlorophyll a (P < 0.05).

• Journal of Marine Life Science
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• v.6 no.1
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• pp.23-30
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• 2021

The differentiation process of male germ cells and sperm morphology of the abalone Haliotis discus hannai were described in ultrastructure. The differentiation process of sperm was divided into four stages: spermatogonium, spermatocyte, spermatid and sperm. The process of differentiation from spermatogonium to spermatocyte did not show significant morphological changes. However, during the spermiogenesis there were distinct morphological changes such as chromatin condensation, morphological changes of the nucleus, and formation of acrosome, midpiece and flagellum. The sperm of the abalone consisted of head, midpiece and tail. The head of approximately 5.3 ㎛ in length was composed of a nucleus of high electron dense and bullet-shaped acrosome. The midpiece was composed of the basal body and mitochondria, and five mitochondria were arranged in single layer around the basal body. The cross section of the tail showed a "9+2" axonemal structure. These morphological and structural features are the result of showing that the sperm of H. discus hannai is a primitive type.

• Animal Systematics, Evolution and Diversity
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• v.36 no.4
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• pp.336-346
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• 2020

Mitochondrial genome is an important molecule for systematic and evolutionary studies in metazoans. The development of next-generation sequencing (NGS) technique has rapidly increased the number of mitogenome sequences. The process of generating mitochondrial genome based on NGS includes different steps, from DNA preparation, sequencing, assembly, and annotation. Despite the effort to improve sequencing, assembly, and annotation methods of mitogenome, the low quality and/or quantity sequence in the final map can still be generated through the work. Therefore, it is necessary to check and curate mitochondrial genome sequence after annotation for proofreading and feedback. In this study, we introduce the pipeline for sequencing and curation for mitogenome based on NGS. For this purpose, two mitogenome sequences of Dermatobranchus otome were sequenced by Illumina Miseq system with different amount of raw read data. Generated reads were targeted for assembly and annotation with commonly used programs. As abnormal repeat regions present in the mitogenomes after annotation, primers covering these regions were designed and conventional PCR followed by Sanger sequencing were performed to curate the mitogenome sequences. The obtained sequences were used to replace the abnormal region. Following the replacement, each mitochondrial genome was compared with the other as well as the sequences of close species available on the Genbank for confirmation. After curation, two mitogenomes of D. otome showed a typically circular molecule with 14,559 bp in size and contained 13 protein-coding genes, 22 tRNA genes, two rRNA genes. The phylogenetic tree revealed a close relationship between D. otome and Tritonia diomea. The finding of this study indicated the importance of caution and curation for the generation of mitogenome from NGS.

• Journal of the Korean Society of Fisheries and Ocean Technology
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• v.59 no.4
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• pp.290-300
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• 2023

This study aimed to identify the actual catch situation of offshore dredge gear which is newly regulated in the legislation. It's also conducted to identify the species composition, weight of the catch including the target species and incidental catches, and to provide the basic information necessary for the resource management of aquatic organisms caught by offshore dredge. During the investigation period (from September 2022 to May 2023), a total of 61 species appeared in the test operation sea of Boryeong, Chungcheongnam-do and Gunsan, Jeollabuk-do, with 31 species of fishes, 11 species of malacostraca, six species of gastropoda, five species of bivalvia, three species of cephalopoda, three species of asteroidea, one species each of asteroidea and holothuroidea appeared. According to the results of the test operation conducted in September and November 2022, the non-catch season of Atrina (Servatrina) pectinata, 1,203 shellfishes were caught out of 2,979 caught in number, showing a bycatch rate of 59.6%, and by weight, 157.9 kg of shellfish was caught out of the total catch of 448.4 kg, showing a bycatch rate of 64.8%. On the other hand, in February and May 2023, the catch season for Atrina (Servatrina) pectinata, 3,692 fishsells were caught out of the 4,232 catches in total, showing a bycatch rate of 12.8%, and by weight, 1,185.0 kg of shellfish was caught out of the total catch of 1,293.2 kg, showing an 8.3% bycatch rate.

• Journal of the Korean Society of Fisheries and Ocean Technology
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• v.60 no.2
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• pp.101-113
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• 2024

This study investigated the species composition and community structure of aquatic organisms captured using coastal beam trawling in Gomso Bay, Jeollabuk-do, from January to December 2022. Throughout the experimental period, a total of 20,246 individuals belonging to 94 marine species were captured, with a combined biomass of 602,828 g. Fish exhibited the highest abundance, comprising 56 species, followed by crustacea (21 species), bivalvia (8 species), cephalopoda (5 species), gastropoda (3 species), and holothuroidea (1 species). The dominant species was Leiognathus nuchalis, constituting 14.0% of the total individuals, followed by Portunus trituberculatus at 12.1%, Oratosquilla oratoria at 10.4%, Crangon hakodatei at 9.9%, and Metapenaeus joyneri at 7.9%. The diversity index ranged from 1.72 to 2.55, with the lowest diversity observed in March and the highest in July. Cluster analysis based on species composition of the 27 most common species showed that aquatic organisms were divided into three groups: spring and summer organisms (Group A) and summer organisms (Group B) and autumn and winter organisms (Group C).

• Journal of the Korean Society of Environmental Restoration Technology
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• v.26 no.6
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• pp.179-188
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• 2023

참달팽이(Koreanohadra koreana)는 환경부에서 지정한 법정보호종(멸종위기 야생생물 II급)이며, 전라남도 신안군 홍도와 하태도에서만 서식하는 한국고유종이다. 반면, 그 동안 참달팽이 지방산에 대한 연구는 진행된 바 없다. 홍도와 하태도를 대상으로 계절, 미소서식처, 지역 차이에 따른 참달팽이의 지방산 구성 변화를 비교하기 위해 분석에 사용한 표본의 개수는 총 99개였다. 실험결과 총 16가지의 지방산이 검출되었으며, 주로 식물질 먹이에서 유래되는 다중불포화지방산(PUFAs)이 53.6%로 가장 높았다. 반면, 동물성 또는 미생물에서 유래하는 단일불포화지방산(MUFAs)은 31.4%, 포화지방산(SFAs)은 15.0%로 상대적으로 적게 검출되었다. 참달팽이의 총 지방산량 변화는 PUFAs의 변화와 가장 강한 상관관계(R²=0.88, p < 0.0001)를 보였다. 계절별로 PUFAs는 봄 (13.20 mg/g)과 여름 (13.08 mg/g)이 가을 (12.06 mg/g)과 겨울 (12.40 mg/g)에 비해 많은 양이 검출되었다. 미소서식처별 PUFAs는 초지대(12.80 mg/g)에서 석회질 지대(12.48 mg/g) 보다 다소 높게 나타났다. 반면, 지역별로 홍도(12.65 mg/g)와 하태도(12.64 mg/g)는 차이가 거의 없었다. PUFAs는 참달팽이의 먹이원을 기반으로 한 서식지의 질을 추적할 수 있는 하나의 지표로서 활용가치가 높을 것으로 기대된다.

• Korean Journal of Organic Agriculture
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• v.26 no.2
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• pp.297-316
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• 2018

The golden apple snail (GAS, Pomacea canaliculata) is an invasive freshwater snail. The GAS was introduced in Korea without prior studies on the possibility of crop damage or its impact on the natural ecosystem. The freshwater apple snails can be found typically in ponds, rice paddies, irrigation canals, roadside ditches or slower portions of streams. In this study, we were carried out to investigate the assessment of physiological and ecological characteristics, environmental characteristics inhabited area in winter season and cause of massive death at one time of golden apple snails used for weed control in wet rice paddies. The GAS was introduced from Japan to Korea for commercial production as a dietary protein supplement. The golden apple snail was also used a recently for weed control in wet rice cultivation. The species of freshwater Pomacea snails is belonging to the genus Pomacea, family ampulariidae, order mesogastropoda, subclass pulmonata, class gastropoda, phylum mollusca. The GAS spread into irrigation ditches and natural waterways. It is now distributed in ponds and canals near rice fields of southern parts of the country and has overwintered. It increases its cold hardiness before winter. However, the physiological mechanism of cold hardiness in molluscs is poorly understood, especially in freshwater molluscs. Our results on physio-ecological characteristics of the Pomacea apple snail showed that the ratio of males to females was 1: 1.99~2.33. The daily growth was 87.7 mg in weight, 0.31 mm in height and 0.33 mm in width of the their shell. On the other hand, the golden apple snails were very high to resistance on drying condition and survived rate about 80% up to 3 months. The inhabitation of GAS was no statistical significant impacts on the water quality. An important property of aqueous solutions is agricultural water quality because it affects chemical and biochemical properties such as chemical reactions, equilibrium conditions, and biological toxicity. The death rate of weed control apple snails by Ostracoda (Stenocypris hislopi) was only 2.86% and 5.71% depending on the density. Therefore, GAS was not a direct death caused by Ostracoda (Stenocypris hislopi).

• The Korean Journal of Malacology
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• v.27 no.2
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• pp.131-141
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• 2011

Boring caracteristics, boring rate, and predation, rates on the valves of the seed and adult clams of Meretrix petechialis by Glossaulax didyma didyma in the shellfish aquafarm and the indoor rearing aquarium were investigated by various morphometric data. The investigations were carried out from June to September, 2007. The morphology of drilled holes on the valves of M. petechialis showed the crater type as seen in the spats of Ruditapes philippinarum and M. lusoria. The sizes of the outer diameters of holes were greater than the inner diameters of the holes on the valves of M. petechialis in the shellfish aquafarm and the indoor aquarium at the laboratory. On the whole, the sizes of the holes on the valves of the seeds of M. petechialis was smaller than those bored holes on the adult valves. The location of the bored holes on the valves of the seeds varied widely with the the sizes of the individuals of M. petichialis, while most of holes on the valves of adult clams were located near the umbo position of the valves of the clams in the shellfish aquafarm and the indoor aquarium at the laboratory. On the whole, the outer and inner diameters of the bored holes increased with increase of shell lengths of the clams in the shellfish aquafarm and the indoor rearing aquarium at the laboratory. The authors could confirm experimentally the boring snail, G. didyma didyma, drilled the seeds and adult clams of M. petechialis. In the experiments for 15 days (three times repeated) in the indoor rearing aquarium at the laboratory, the mortality of dead shells to total shells of M. petechialis by boring snail Glossaulax didyma didyma was totally average 41.5%, and percent of drilled shells to total dead shells of clams by the boring snail was average 47.1%. Of total shells, percent of drilled shells to total shells of clams by the boring snail was totally average 19.3%. Predation of G. didyma didyma were greater at night than the day time. Average 0.5 seed and adult individuals of M. petewchialis were consumed per G. didyma didyma, per day. Predation varied with shell lengths of M. petechialis and shell widths of G. didyma didyma.

• The Korean Journal of Malacology
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• v.12 no.2
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• pp.109-121
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• 1996

Histochemical experiment was carry out respectively to confirm the properties of the salis (Achatina fulica and Incilaria fruhstorferi). SDS-PAGE was carried out to compare and invertigate the distribution aspects of protein patterns between the two species. Five types(A, B, F, H and I)of gland cells with four neutral mucopolysaccharide cells and one acid mucopolysaccharide cells and one acid mucopolysaccharide cell were observed in acinous of Achatina fulica, while six types were observed in acinous of Incilaria fruhstorferi: ond acid mucopolysaccharide cell(type-A) and four neutral mucopolysaccharide cells(type-B, C, D and F) and one cell that acid mucopolysaccharide is only mimbrane that surrounded granule(type-E). The results are follows:The thpe-A fland cell is commonly observed between the two species. The type-A gland cell in Achatina fulica possesses a nucleus with a developed heterdchromatin, and the cytoplasm was filled with round granules. The granules were surrounded with an uncertain boundary mimbrane and confirmed with neutral mucopolysaccharides, but is confirmed acid mucopolysaccharide in Incilaria fruhstorferi.The type-B gland cell is obwerved in the two species, too. The type-B gland cell in Achatina fulica was round shaped, and included an evenly alrge nucleus. The uncleoplasm included granules that were confirmed in the neutral mucopolysaccharides of the two species. The type-C and D gland cells exist only in Incilaria fruhstorferi, nucleoplasm was well developed heterochromatins. The type-E gland cell appears in the acinous surrounded the salivary gland of Incilaria fruhstorferi. Thdse granules appear irregular irregular shape and size and the cytoplasm is formed in alveolar. The type-F gland cells are commonly observed in the salivary glands of the two species. They are similar with the type-B gland cell, but the granular shape is comparatively small and irregular, and possess the neutral mucos granules. The type-H gland cells are mainly seen in only Achatina, and in nucleus is a well developed heterochromatin. The cytoplasm is filled with round small granules with acid mucopolysaccharide for alcianophilia observed. The type-I cell was small cell with an irregular shape and only observed in the gland cells of Achatina fulica. The heterochromatins were developed in the nucleus and the granules are not observed in cytoplasm.Secretory ducts of saliva are composed of the interlobular duct and interlobar secretory duct. In Achatina fulica the interlobular duct consists of a simple cuboidal epithelium, while the endothelium of intralobar secretory duct of Incilaria fruhstorferi consists of a simple squamous epithelium and in the cytoplasm is filled with granules(type-G secretory cell). A SDS-PAGE was carried out to confirm that the protein band pattern consist of salivary gland. In conclusions, five more bands in Achatina fulica and three bands in Incilaria fruhstorferi were confirmed in MW<29 kDa. one main band coincides comparatively with both and is between 29-45 kDa. There are four main bands in Achatina fulica and two main bands in Incilaria fruhstorferi between 45-66.5 kDa respectively. The bands in Achatina fulica seem more complex than in incilaria fruhstorferi.

• The Korean Journal of Malacology
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• v.23 no.2
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• pp.209-216
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• 2007

The ovarian structure and ultrastructural changes in germ cells during oogenesis of the spiny top shell, Batillus cornutus, have been investigated by light and electron microscopic observations. Specimens of the spiny top shell were collected from the subtidal zone of Wando, south coast of Korea. Spiny top shell was dioecious. The ovary was located on the surface of the hepatopancreas in the spiral posterior region. The ovary had greenish color in the gonadal mature season. The ovary comprised many ovarian lobules, and the ovarian lobule consisted of connective mesenchymal tissue and epithelial cells. Oogonium had a large nucleus with nucleolus of high electron density. In previtellogenic oocyte, small yolk granules of low electron density were scattered in the cytoplasm. Oocytes in the initial vitellogenic stage were connected with the ovarian lobule by egg stalk. The result of TEM observations showed that initial vitellogenic oocyte contained well-developed Golgi complex, endoplasmic reticula, tubular mitochondria and numerous yolk granules of various electron densities and sizes. The electron density, size and quantity of yolk granules which were distributed in the active vitellogenic oocyte were increased compared to the previous stage. Thickness of egg envelope in the late active vitellogenic oocyte was approximately 4.4 $[\mu}m$. Cytoplasm of ripe oocyte was filled with proteid yolk globules of high electron density and lipid yolk globules of low electron density. In this stage, the thickness of egg envelope was approximately 6.5 ${\mu}m$.