• Title/Summary/Keyword: Fungal isolation

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Eleven previously unrecorded fungal species isolated from hyphosphere soil supporting wild mushrooms in Jeju Island (제주도 야생버섯 hyphosphere 토양에서 분리된 국내 미기록 진균 11종 보고)

  • Hyeongjin Noh;Ye In Kim;Dong Hyeung Lee;Pyung Yeol Ko;Hye Sung Park;Kang-Hyo Lee;Seong Hwan Kim
    • Journal of Mushroom
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    • v.21 no.4
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    • pp.228-240
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    • 2023
  • To understand microorganism effects on wild mushroom fruiting bodies, we investigated the fungi in hyphosphere soil supporting wild mushroom species Cortinarius violaceus, Amanita hemibapha, Laccaria vinacelavellanea, and Amanita verna found in the Gotjawal area of Jeju Island. Fungal species identification based on morphological traits and molecular analysis of ITS, LSU rDNA, and β-tubulin gene sequences resulted in isolation and identification of eleven fungal species previously unrecorded in Korea. These newly-recorded species are: Arthrinium kogelbergensis, Kalmusia longisporum, Keithomyces carneum, Neopyrenochaeta cercidis, Penicillium ranomafanaense, Phomatodes nebulosa, Pyrenochaeta nobilis, Tolypocladium album, Talaromyces kendrickii, Talaromyces qii, and Umbelopsis gibberispora, and their morphological characteristics and phylogenetic positions are described.

Detection of DNA from Dermatophytes by Polymerase Chain Reaction (Polymerase chain reaction에 의한 동물 유래 피부사상균 DNA의 검출)

  • Kim, Young-Wook;Yeo, Sang-Geon;Choi, Woo-Pil
    • Korean Journal of Veterinary Research
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    • v.42 no.3
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    • pp.363-370
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    • 2002
  • For the development of diagnostic polymerase chain reaction (PCR) to fungal infection by dermatophytes Trichophyton and Microsporum, detection of the fungal DNA by PCR and analysis of the DNA pattern were undertaken in the present study. A total of 15 strains were tested and those consisted of 3 reference strains and 12 isolates such as: reference strains of T mentagrophytes (downy type, ATCC 9533), T rubrum (IFO 6204) and M gypseum (ATCC 9083), and each isolate of T mentogrophytes (powdery type), T mentagrophytes (granular type), T mentogrophytes (purple-red type), T rubrum, T raubitschekii, T tonsurans, T equinum, T ajelloi, T verrucosum, M cookei, M nanum and M gypseum. The DNA were purely isolated from all strains of Trichophyton spp. and Microsporum spp. by a simple method partly consisted of disruption of fungal cells by lyophilization and grinding and extraction of fungal DNA without phenol treatment which is a routine procedure in DNA isolation. For the detection of fungal DNAs, optimal condition of PCR was determined as preheating once at $94^{\circ}C$ for 5 min, 35 cycles of denaturation at $94^{\circ}C$ for 1 min, annealing at $38^{\circ}C$ for 1 min and polymerization at $72^{\circ}C$ for 2 min, and 1 cycle of final extension at $72^{\circ}C$ for 5 min. In PCR using arbitrary primers AP-1 (5' ACCCGACCTG3') and AP-2 (5' ACGGGCCAGT3'), DNAs in various numbers and sizes were detected from different species of Trichophyton and Microsporum, while DNAs in similar size were also detected in all strains of Trichophyton spp. and Microsporum spp. There were unique DNAs observed from certain dermatophytes by AP-1 such as 1,900 bases in T rubrum, 950 and 1,100 bases in T raubitscheldi, 2,100 bases in T equinum, 400 bases in T verrucosum and 1,150 bases in M gypseum. The unique DNAs were also observed by AP-2 such as 1,200 bases in T ajelloi, 250 bases in T verrucosum, 1,150 bases in M cookei and 2,000 bases in M nanum. The results indicated that PCR can detect a specific DNA from certain Trychophyton and Microsporum spp, which can be the information for further development of diagoomc PCR to dennatophytes.

Isolation of Aflatoxin Producing Fungi from Korean Rice and Soybean Paste (한국산 쌀과 메주에서의 Aflatoxin생성 진균분리)

  • Lee, Jang-Kyu;Kim, Chan-Soo;Kim, Jong-Woo
    • The Journal of the Korean Society for Microbiology
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    • v.10 no.1
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    • pp.33-37
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    • 1975
  • In view of the warmth and hunidity in Korea, there is little possibility to avoid the fungal contamination of rice soybean paste which are major foodstuffs in this country. In order to isolate aflatoxin producing fungi from these foodstuffs, 6 samples of rice were collected from the farmhouses at Cbangsung and 40 samples of soybean paste in Seoul areas. The peptone glucose chloramphenicol, Czapek-Dox agar and malt agar were used for the isolation and identification of fungi, and Adye and Meteles medium and/or Sahouraud medium for the production of toxins. The cultures for the toxin production were done at $25^{\circ}C$ for $5{\sim}7$ days. Eleven Penicillium species were isolated. from 6 samples of rice, and 37 Aspergillus flavus, 48 Aspergillus species, 1 Penicillium species and 105 others were isolated from 40 samples of soybean paste. Among these, one Penicillium species isolated from rice was found to be aflatoxin producing strain, and the toxin was quantitatively measured. Aflatoxin appeared to be more favorably produced in the glucose Sabouraud medium than in the Adye and Meteles medium.

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Isolation of Endophytic Fungi Capable of Plant Growth Promotion from Monocots Inhabited in the Coastal Sand Dunes of Korea (사구에 서식하는 단자엽식물로부터 식물 생장 촉진 활성 내생 진균류의 분리)

  • Khan, Sumera Afzal;Hamayun, Muhammad;Rim, Soon-Ok;Lee, In-Jung;Seu, Jong-Chul;Choo, Yeon-Sik;Jin, Ing-Nyol;Kim, Sang-Dal;Lee, In-Koo;Kim, Jong-Guk
    • Journal of Life Science
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    • v.18 no.10
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    • pp.1355-1359
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    • 2008
  • Endophytic fungi predominantly inhabit grasses, and produce a variety of beneficial metabolites for plant growth, as well as help their hosts against pathogens and herbivores. Current study was focused on plant growth promoting activity of endophytic fungi inhabited in the roots of sand dune grasses. We collected 49 fungal isolates from the roots of four most common sand dune grasses and screened them for their growth promoting capacity. Results showed that 37 fungal isolates (75.5%) promoted plant height and shoot length of waito-c rice, 11 fungal isolates (22.5%) suppressed it, while 1 fungus (2%) showed no effect on the growth attributes. The fungal strain Gibberella fujikuroi, along with distilled water and Czapek broth medium, were taken as control for this experiment. It was concluded that a major proportion of endophytic fungi inhabited in the sand dune plants produce metabolites, and thus help in growth and development of the host plant.

Investigation of Fungi in Pesticide Fumigated Oak Wilt-Diseased Logs (훈증방제 처리한 참나무시들음병 감염목의 사상균 조사)

  • Suh, Dong Yeon;Son, Seong-Yeol;Kim, Seong Hwan;Seo, Sang Tae;Kim, Kyung Hee;Ko, Han Kyu
    • The Korean Journal of Mycology
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    • v.40 no.4
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    • pp.288-291
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    • 2012
  • Korean oak wilt disease caused by Raffaelea quercus-mongolicae is vectored by the ambrosia beetle Platypus koryoensis. To prevent the spread of the disease, the beetle infested oak tree had been cut into logs, covered with plastic vinyl, fumigated with a pesticide, and stored for three years on the site where the tree was cut. This study was carried out to get information on the fungi colonizing the fumigated oak wood. Wood disk samples collected from the fumigated oak logs at two locations in the Taejo Mountain, Cheonan city, were used for fungal isolation. A total of 99 filamentous fungal isolates were obtained from the wood disk samples. Hypocrea spp., Trichoderma spp. and Penicillium spp. were identified based on morphological characteristics and nucleotide sequence analysis of translation elongation factor 1-alpha gene and ITS rDNA region. Trichoderma was the major fungal group. R. quercus-mongolicae, and P. koryoensis were not detected from the fumigated oak wood. Our work provided evidence that after three years of storage, the fumigated oak wilt-diseased logs should be no longer harmful source of oak wilt disease transmission.

Production of Arachidonic Acid by Mortierella Fungi

  • Higashiyama, Kenichi;Fujikawa, Shigeaki;Park, Enoch Y.;Shimizu , Sakazu
    • Biotechnology and Bioprocess Engineering:BBE
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    • v.7 no.5
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    • pp.252-262
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    • 2002
  • The growing interest in the application of arachidonic acid (ARA) in various fields of health and dietary requirements has elicited much attention on the industrial production of ARA-containing oil by the cultivation of Mortierella fungi. For the industrial production of ARA, various studies, such as isolation of a high-potential strain and optimization of culture conditions, have been conducted. Studies including the investigation of morphology are important because ARA is accumulated in the mycelia, and thus cultivation with high biomass concentration is essential for obtaining a high ARA yield. Combining the results derived from various studies, a high ARA yield was attained in an industrial fermentor. These ARA production techniques are applicable to the production of other polyunsaturated fatty acids (PUFAs), and will contribute to the improvement of fermentation technology especially in the field of fungal cultivation.

Mariannaea samuelsii Isolated from a Bark Beetle-Infested Elm Tree in Korea

  • Tang, Longqing;Hyun, Min-Woo;Yun, Yeo-Hong;Suh, Dong-Yeon;Kim, Seong-Hwan;Sung, Gi-Ho;Choi, Hyung-Kyoon
    • Mycobiology
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    • v.40 no.2
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    • pp.94-99
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    • 2012
  • During an investigation of fungi from an elm tree infested with bark beetles in Korea, one isolate, DUCC401, was isolated from elm wood. Based on morphological characteristics and phylogenetic analysis of the internal transcribed spacer and 28S rDNA (large subunit) sequences, the isolate, DUCC401, was identified as Mariannaea samuelsii. Mycelia of the fungus grew faster on malt extract agar than on potato dextrose agar and oatmeal agar media. Temperature and pH for optimal growth of fungal mycelia were 25oC and pH 7.0, respectively. The fungus demonstrated the capacity to degrade cellobiose, starch, and xylan. This is the first report on isolation of Mariannaea samuelsii in Korea.

IMPROVEMENT OF GENETIC TRANSFORMATION SYSTEM IN ASPERGILLUS ORYZAE

  • Lee, Jae-Won;Hahm, Young-Tae
    • 한국생물공학회:학술대회논문집
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    • 2000.04a
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    • pp.215-218
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    • 2000
  • Aspergillus oryzae is a filamentous fungus classified in the group Aspergillaceae Ascomycetes. It is an important microorganism for industrial production of enzymes and fermented food productions. The genetic transformation system in A. oryzae was used to protoplast mediated transformation with PEG/$CaCl_2$. When the protoplast was used, the regeneration efficiency was decreased and then transformation frequence was also effected. In this study, fungal transformation was carried out by bypassing the protoplast isolation step, changing enzymes, such as hemicellulase and celluclast, and decreasing the culturing time for the increment of the transformation efficiency. 83 transformants/10ug of DNA with hemicellulase were obtained, compared with less than 10 transformants with novozyme234 and celluclast.

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Biological Control of Powdery Mildew by a Hyperparasite, Ampelomyces quisqualis 94103: From isolation to a commercial biofungicide product.

  • Lee, Sang-Yeob;Lee, Sang-Bum;Kim, Choong-Heo
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.30-31
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    • 2003
  • Total 291 isolates of Ampelomyces quisqualis were obtained from 32 species of powdery mildew fungi and a selected isolate, Ampelomyces quisqualis 94013 (AQ94013) effectively hyperparasitized 6 species of Sphaerotheca and one species of Erysiphe which cause serious damage on many important crops in Korea. Moreover, AQ94013 showed antagonistic effects against 12 major fungal plant pathogens as well. Results indicated that the present isolate is not a host specific hyperparasite and has a broad spectrum of biocontrol potential. Providentially, AQ94013 revealed resistance to a number of agrochemicals so as to be applied with the chemicals reciprocally.(중략)

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Isolation and identification of Actinomycetes for the Control of Agricultual Pests and Fungal Pathogene (농작물 해충 및 진균류 방제를 위한 방선균의 분리 및 동정)

  • 이은정;강경돈
    • Journal of Sericultural and Entomological Science
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    • v.40 no.1
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    • pp.63-69
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    • 1998
  • Twenty seven out of ca. 5,000 actinomycete strains, which were isolated from soil collected throughout the country, showed antibicrobial effects against fungai, Rhizopus stronifer (ATCC 6227a), Rhizoctonia solani (KCCM 11271) and yeast, Candida albicans (ATCC 10231). From these antifungal microorganisms, we further selected seven strains which seemed to produce insecticidal substances with in vivo test, using silkworm, Bombyx mori and beet armyworm, Spodoptera exigua. Morphological and biochemical experiments revealed that three strains out of seven were Streptomyces. Further investigations on the physical and chemical properties of these antifungal and insecticidal substances are now in progress.

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