• Journal of the Korea Academia-Industrial cooperation Society
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• v.18 no.12
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• pp.466-472
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• 2017

This study was designed to examine the diversity census of fungi in rumen microbiome via meta-analysis of fungal 28S rDNA sequences. Both terms, "rumen" and "ruminal," were searched to retrieve the sequences of rumen fungi. As of September 2016, these sequences (n=165) of ruminal origin were retrieved from the Ribosomal Database Project (RDP; http://rdp.cme.msu.edu), an archive of all 28S rDNA sequences and were assigned to the phyla Ascomycota, Neocallimastigomycota, and Basidiomycota, which accounted for 109, 48, and 8 of the 165 sequences, respectively. Ascomycota sequences were assigned to the genera Pseudonectria, Magnaporthe, Alternaria, Cochliobolus, Cladosporium, and Davidiella, including fungal plant pathogens or mycotoxigenic species. Moreover, Basidiomycota sequences were assigned to the genera Thanatephorus and Cryptococcus, including fungal plant pathogens. Furthermore, Neocallimastigomycota sequences were assigned to the genera Cyllamyces, Neocallimastix, Anaeromyces, Caecomyces, Orpinomyces, and Piromyces, which may degrade the major structural carbohydrates of the ingested plant material. This study provided a collective view of the rumen fungal diversity using a meta-analysis of 28S rDNA sequences. The present results will provide a direction for further studies on ruminal fungi and be applicable to the development of new analytic tools.

• The Korean Journal of Mycology
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• v.46 no.4
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• pp.393-403
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• 2018

Bio-aerosols transported by the air have been considered as the major source of dispersal agents that contaminate agricultural products. Unseen fungal spores are known sources of bio-aerosols that harm mushroom and human health during mushroom cultivation. This study was conducted to obtain basic data on the concentration and species distribution of fungi present in the indoor air of oak mushroom cultivation houses in Korea. In 2015 and 2016, we sampled and analyzed indoor airborne fungal spores 21 times from 13 oak mushroom cultivation farms located in six different provinces. The concentration of airborne fungi ranged from $1.30{\times}10^2$ to $1.59{\times}10^4cfu/m^3$. Surprisingly, in 20 sampling cases, the fungal concentration exceeded $500cfu/m^3$, which is recommended as the indoor air quality standard by the Ministry of Environment, Korea. A total of 450 fungi were isolated and identified to belong to 33 genera and 46 species. Among the identified fungi, human pathogens (4 genera and 4 species) and plant pathogens (10 genera and 13 species) were present. In addition, Trichoderma harzianum, Trichoderma atroviride, and Trichoderma longibrachiatum, which are detrimental species that affect mushroom health, were found 17 out of 21 sampling times. Our results provide evidence that indoor air quality should be improved for better management of mushroom cultivation houses.

• 한국균학회소식:학술대회논문집
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• 2014.05a
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• pp.41-41
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• 2014

Pinewood nematode (PWN, Bursaphelenchus xylophilus) is a serious pathogenic worm that quickly dry pine trees to death. Recently, PWN has been devastating huge amounts of conifer trees in Korea. As a first step to explore the association and ecological roles of fungi in PWN life cycle in Korea, in this study we first isolated and indentified fungi from PWN-infested Korean pine and Japanese black pine wood sampled in Jinju, Sacheon, Pocheon, Chuncheon, Gwangju, and Hoengseong in Korea. A total of 144 fungal isolates were obtained from Japanese black pine wood and 264 fungal isolates from Korean pine wood. Their morphology and nucleotide sequences of the ITS rDNA and ♌-tubulin gene were examined for species identification. Ophiostoma ips, Botrytis anthophila, Penicillium sp., Hypocrea lixii, Trichoderma atroviride, O. galeiforme, Fusarium proliferatum were identified from Japanese black pine wood. Leptographium koreanum, L. pini-densiflorae, Ophiostoma ips, Penicillium raistrick, Trichoderma sp. were isolated from Korean pine wood. O. ips and L. koreanum were the major species on the two different PWN-infected pine tree. The cultivation of PWN on fungal mat of the identified species did some enhance PWN reproduction. The ambrosia beetle, Platypus koryoensis, is a serious pest of oak trees in Korea. In this study we investigated filamentous fungi present in the body of the beetle. Fourteen genera of filamentous fungi belonging to Ascomycota and Basidiomycota were isolated. All the obtained genera were isolated in the mitosporic state. The identified fungi were classified in 11 distinct orders including the Ascomycota (Eurotiales, Hypocreales, Microascales, Ophiostomatales, Pleosporales, and Sordiales) and Basidiomycota (Agaricales, Corticiales, Polyporales, and Russulales Xylariales). Within Ascomycota, 13 species were found. Meanwhile five species were found within Basidiomycota. The results showed the presence of diverse fungi in P. koryoensis. Among the isolated fungi, some were able to produce wood degrading enzymes. Further fungal isolation was performed with P. koryoensis infested Quercus mongolica trees sampled at Kumdan mountain in Hanam-Si, Gyeonggi province from June of 2009 to June of 2010. Penicillin spp. and Trichoderma spp. were the major species of mold fungi group. Pichia guilliermondii was the major species of mold yeast group. Raffaelea quercus-mongolicae was also isolated, but its isolation frequency was not high. Other species identified were Ambrosiella xylebori, Fusarium solani, Cryphonectria nitschke, Chaetomium globosum, and Gliocladium viride, Candida kashinagacola, C. maritima, C. vanderkliftii, Saccharomycopsis crataegensis.

• The Korean Journal of Mycology
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• v.43 no.1
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• pp.13-19
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• 2015

Endophytic fungal strains were isolated from 5 aquatic plant species (Trapa japonica, Miscanthus sacchariflorus, Oenanthe javanica, Typha orientalis and Zizania latifolia) native to river wetland of tributary in Nakdong river. Total 34 strains were purely isolated, and then its internal transcribed spacer (ITS) regions were amplified. After that, phylogenetic analysis based on ITS sequences and deduction of diversity indices were done. Fungal isolates were belonged to 17 genera, concretely in Acremonium, Alternaria, Aspergillus, Cladosporium, Emericellopsis, Fusarium, Galactomyces, Leptosphaeria, Microsphaeropsis, Penicillium, Peyronellaea, Phoma, Pseudeurotium, Rhizomucor, Talaromyces, Trematosphaeria and Zalerion. Especially, fungal isolates were distributed intensively in genera Alternaria and Talaromyces. This study deals with the diversity of endophytic fungal species that showing symbiotic relationship with their host aquatic plants.

• Current Research on Agriculture and Life Sciences
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• v.3
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• pp.120-128
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• 1985

The 32 species of the shade trees and ornamental plants belong to 23 families which seemed to be infected by fungal pathogens were collected at 5 localities in Korea. The diseases were diagnosed with their symptoms, the characteristics of the pathogens and the pathogenicity on host plants. The results were summarized as follows ; The 45 diseases by 21 genera of fungal pathogens were investigated on 30 species of the shade trees and ornamental plants. Among them 22 diseases by 13 genera of fungal pathogens were turned out to be new diseases which have not hitherto been described on the host plants of 16 species in Korea.

• Journal of Korean Society for Atmospheric Environment
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• v.20 no.1
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• pp.69-76
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• 2004

Asian Dust samples were collected in the ambient air of Seosan, Western Korea, in spring of 2000∼2002. PM (Particulate Matter) concentrations were 199,8$\mu\textrm{g}$/㎥ in the first Asian Dust period (March, 23∼24) and 249.4$\mu\textrm{g}$/㎥ in the second period (April, 7∼9) of 2000. Compared with the concentrations in 2000, relatively low PM concentrations, 157.3$\mu\textrm{g}$/㎥ were measured in the periods of 2001 (April, 24∼26). Especially high PM concentration 953.1$\mu\textrm{g}$/㎥ were measured in the periods of 2002 (March, 21∼22). The variation in the PM concentration was observed according to the time for the formation of Asian dust. Considering the particle size distributions of Asian dust, a high concentration was also observed in coarse particle region. The results of backward trajectory model showed the route of the dust storms from northern area of Mongol and Gobi desert. Various mycelia grown from fungal spores were observed on the PM samples and identified at the genus level. All the genera from the three years (2000∼2002), Fusarium, Aspergillus, Penicillium, Basipetospora, Epicoccum and Monotospora are hyphomycetes in the division Fungi imperfecti (Deuteromycota). Fungal composition on the dust sample in March, 2000 was similar to the result of March, 2002. However, the result of April, 2001 was obviously different from the other dust periods. The variations of fungal compositions between the dust periods could be caused by the trajectories of the dust storms.

• Korean Journal of Environmental Biology
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• v.20 no.4
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• pp.294-299
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• 2002

PM (Particulate Matter) samples contained fungal spores were collected in the ambient air of Seosan, west Korea, in springtime of 2000 and 2001. PM concentrations were $199.8\mu{g}\;m^{-3}$ in the 1st Asian Dust Storm period (March, 23 ~ 24) and $249.4\mu{g}\;m^{-3}$ in the 2nd period (April, 7~9), 2000. Compared with the concentrations in 2000, relatively low PM concentration ($157.3\mu{g}\;m^{-3}$ ) was measured in the Asian Dust Storm period (April, 24 ~ 20) of 2001. Although there were somewhat differences for the total PM concentrations among the three periods, majorities of the PM were composed of coarse particles sized about 5 ~ 6 $\mu{m}$ over the periods of the two years. Diverse molds grown from fungal aerosols were observed in the PM samples and identified at the genus level. All the genera, Fusarium, Aspergillus, Penicillium, Basipetospora, Epicoccum and Monotospora are hyphomycetes in the division Fungi imperfecti (Deuteromycota). Especially, morphologically more diversified mycelia of hyphomycetes were grown on the fine PM sample (1.1 ~ 2.1 $\mu{m}$) than coarse PM samples in the periods of 2000. Furthermore, some molds were grown on even the background PM sample less than 0.43 $\mu{m}$ in the period of 2001. It was thought that some kinds of ultra fine sized fungal spores were transported by the Asian Dust Storm and suspended in the ambient air of study area during the events.

• 한국균학회소식:학술대회논문집
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• 2014.10a
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• pp.47-47
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• 2014

Dokdo island is located in the northeastern part of Ulleungdo, known as volcanic island. In total, 53 fungal isolates were isolated from Dokdo island soil sample, using dilution plate technique. The isolates were identified on the basis of morphological characteristics and rDNA ITS sequence analysis. Out of them, 41 isolates were identified at the level of species. The dominant fungal species and genera included Fusarium spp., Mucor sp., Clonostachys spp., and Trichoderma sp. The % sequence identity (the number of matches/the complete alignment length) values via NCBI BLAST searching of EML-IF9, EML-MF30-1 and EML-DDSF4 represented 97.19% (485/499) with Clonostachys cf. rosea (GenBank accession no. KC313107), 98.33% (472/480) with Metarhizium guizhouense (GenBank accession no. HM055445), and 100% (350/350) with Mortierella oligospora (GenBank accession no. JX976032), respectively. Three species of C. rosea, M. guizhouense and M. oligospora represented new records of fungi from Dokdo island, Korea. The antimicrobial activities of the fungal strains varied with tested. Two isolates (EML-MFS30-1 and EML-IF9) showed antifungal activity against several fungi including Fusarium oxysporum and Rhizotonia solani. Clonostachys rosea (EML-IF9) showed strong hydrolytic enzyme activity. Our results showed that the antagonistic fungi including Clonostachys rosea will be used as potential biocontrol agents for control of fungal diseases.

• The Korean Journal of Mycology
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• v.48 no.3
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• pp.251-271
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• 2020

Diversity and community composition of bulb-associated fungi of Fritillaria Cirrhosae Bulbus source plants, which are used in traditional chinese medicine, in the eastern Himalaya-Hengduan Mountains, southwestern China, were estimated based on the internal transcribed spacer rDNA sequence analysis, using host plant species, geographic area, and plant phenology as variables. A total of 1,486 fungal sequences assigned to 251 operational taxonomical units (OTUs) were obtained from the bulbs. Fungal OTUs comprised 96.41% Ascomycotina, 3.52% Basidiomycotina, and 0.07% Zygomycotina. Sordariomycetes, Hypocreales, and Nectriaceae were the most frequent fungal lineages at each taxonomic rank. Fusarium, Ilyonectria, Tetracladium, Leptodontidium, and Tomentella were the top OTU-rich genera. Fusarium sp. 03, Ilyonectria rufa, Fusarium sp. 08, Ilyonectria sp. 03, and Leptodontidium orchidicola 03 represented the most frequent OTUs. Fusarium spp. were the most frequent general taxa. The distribution of fungal community exhibited preferences for host plant species, geographic area, and plant phenology. These findings are the foundation of our research on culturing and active metabolites of bulb-associated fungi of Fritillaria Cirrhosae Bulbus source plants.

• Mycobiology
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• v.48 no.5
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• pp.364-372
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• 2020

To improve our understanding of the relationship between soil higher fungi (belonging to Ascomycota and Basidiomycota) and Abies koreana, we surveyed A. koreana soil fungal communities in a forest in Mt. Halla, Jeju Island, Korea by next-generation sequencing (Illumina Miseq). To confirm the soil higher fungal communities, we collected two types of soils from a defined plot: soils with dead (AKDTs) and living A. koreana (AKLTs), respectively. Soil fungi were classified into 2 phyla, 19 classes, 64 orders, 133 families, 195 genera, and 229 OTUs (895,705 sequence reads). Nonmetric multidimensional scaling (NMDS) showed significantly different soil higher fungal communities between AKDTs and AKLTs (p < .05). In addition, the saprophyte composition was significantly affected by A. koreana status (p < .05). The proportion of the mycorrhizal Clavulina spp. was different between soils with AKDTs and AKLTs, suggesting that Clavulina spp. may be a crucial soil fungal species influencing A. koreana. This study will lead to a better understanding of the ecological status of A. koreana in Mt. Halla. In addition, this study could be useful for the conservation and management of A. koreana habitats.