• Journal of fish pathology
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• v.32 no.1
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• pp.1-8
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• 2019

Rock bream iridovirus (RBIV) is a member of the Megalocytivirus genus that causes severe mortality to rock bream (Oplegnathus fasciatus) with characteristic clinical signs of spleen enlargement. In this study, we assessed spleen size and RBIV copy number patterns in RBIV-infected rock bream to determine lethal and safe levels of virus copy number/spleen index that may define disease progress. We found that rock bream infected with RBIV ($1.1{\times}10^7virus\;copy\;number/100{\mu}l$) and held at 29, 26, 23 or $20^{\circ}C$ exhibited significantly higher levels of spleen size compared to $17^{\circ}C$. In dead condition (100% mortality at $20{\sim}29^{\circ}C$), the spleen index ($spleen\;weight/fish\;weight{\times}100$) and virus copy number were 3.00~5.38 and $10^6{\sim}10^8/{\mu}l$, respectively. Conversely, in survived condition (0% mortality at $17^{\circ}C$), spleen index and virus copy number was as low as not-infected control ($0.34{\sim}1.22/10^0{\sim}10^1/{\mu}l$, respectively). These findings suggest that spleen index can be an indicator of disease severity of RBIV disease.

• Korean Journal of Ichthyology
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• v.26 no.1
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• pp.74-80
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• 2014

Seasonal variation in species composition and abundance of fish assemblage in the tidal creek of Sangnae-ri Suncheon, Korea were studied using monthly samples collected by a push net from April 2011 to March 2012. During the study period, a total of 1,095 individuals belonging to 13 species in 6 families were collected. The dominant fish species were Tridentiger bifasciatus, Mugil cephalus and Favonigobius gymnauchen. These three fish species accounted for 86.6% of the total number of individuals collected. The number of fish species, number of individuals, biomass fluctuated with season showing a low value in winter and high value in spring.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.36 no.3
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• pp.298-305
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• 2003

Seasonal variation in species composition of fish in the estuary of Saemangeum water in the western coast of Korea was determined using seasonal samples collected by an otter trawl from April 2001 to February 2002. Species compositions did not differ significantly among the 4 stations (p>0.05, Wilcoxon signed-rank test). The cumulative number of species and species diversity (H') approached asymptote after four 30-min trawl hauls. Therefore 30-min trawl samples from each of the four stations were pooled to represent each season. A total of 45 species 2758 individuals and 30,346.8 g of fish were collected during the study period. Of the fish collected Leiognathus nuchalis, Synechogobius hasta, Neosalanx jordani, Konosirus punctatus and Chaeturichthys stigmatias predominated in abundance accounting for $68\%$ of the total number of individuals. Seasonal variation of fish abundance showed a similar trend to those of the other western coastal waters of Korea. The resident species were collected only in spring and autumn. Number of species and biomass were highest in summer due to the catch of many migrating species. In winter catch amount was low, and only 7 species were collected.. Brackish water fishes were more abundant in the study area, and Johnius grypotus and Cynoglossus joyneri were not premominated compared to the other coastal waters. This difference in species compositions may be related to the lower salinity in this estuarine habitat than in the other western coastal waters of Korea.

• Korean Journal of Plant Taxonomy
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• v.41 no.4
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• pp.324-328
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• 2011

The purpose of this study was to analyze the interspecific relationships of Chenopodium album and its related taxa collected in Korea. The 18S-26S ribosomal DNA (45S rDNA) loci were detected directly on mitotic chromosomes by fluorescence in situ hybridization (FISH) and the chromosome numbers were examined using aceto-orcein methods. The chromosomal numbers of Chenopodium album var. album and C. album var. centrorubrum were 2n = 6x = 54, whereas for C. album var. stenophyllum, this number was 2n = 4x = 36. The basic chromosome number was x = 9. The biotin labeled 18S-26S rDNA probe exhibited eight yellow fluorescent signals on the metaphase chromosome of C. album var. album and var. centrorubrum respectively, while two yellow signals of C. album var. stenophyllum were noted. All of the signals on the chromosomes were located at the terminal regions. The chromosome number and FISH findings suggest that C. album var. centrorubrum is merged into var. album and that it is clearly distinguished from C. album var. stenophyllum.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.15 no.2
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• pp.19-29
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• 2012

Numerous studies suggested that fish assemblage structure reflects the status of stream ecosystems. The status of streams integrity, including various trophic levels, water quality and habitat degradation, can be assessed by fish assemblages. In this study, we investigated the relationships between fish assemblages and streamline geometry of streams. Previous studies suggested that geomorphologic parameter can be a critical factor of permeability between adjacent two systems. From a landscape ecological perspective, edges may partially control the flow rate of energy between two adjacent systems. Thus, the Streamline geometry can be a geomorphologic parameter that exhibits the integrity of stream. We selected the Nakdong river for study areas, which is one of major rivers and the longest (525 km) River in South Korea. We used the revised IBI representing overall ecological characteristics of Korean fish assemblages and eight sub-assessment criteria of IBI, collected from 82 sampling sites in the Nakdong River. For calculating the Streamline geometry, we measured fractal dimension index that generally used in biology, ecology and landscape ecology. We used the digital land-use/land-cover map and generated a 1-km buffer for each sampling site and refined the shape of the Streamlines. Pearson correlation analyses were performed between Streamline geometry and IBI and sub-assessment criteria of IBI. The results show that IBI and eight sub-assessments of fish are significantly correlated with geometry of Streamline. The fractal dimension of Streamline geometry were related with IBI (r = 0.48) and six sub-assessments of IBI, including total number of native fish and native species, the number of riffle benthic species, sensitive species, tolerant species and native insectivore. Especially, the number of tolerant species(r = -0.52) and native insectivore(r = 0.52) show strong correlation with geometry of Streamline. These results indicate that lower Streamline geometry can result in poor fish assemblages, while higher geometry of Streamline can enhance fish assemblages by potentially supplying insects and better habitat conditions. We expect the results of our study to be useful for stream restoration and management. However, we see the necessity of study investigating the mechanisms how Streamline geometry affect fish assemblages.

• Journal of fish pathology
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• v.28 no.2
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• pp.113-116
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• 2015

A $0.45-{\mu}m$ membrane filter is generally used to remove bacterial contamination during virus extraction from fish samples. However, the number of fish viruses is drastically reduced after filtration with a $0.45{\mu}m$ filter. In this study, we investigated the effect of filters on virus infectivity titer and the change in virus titer and bacterial number following different centrifugation conditions to determine a suitable procedure for virus extraction from fish samples. $10^{4.05}$ and $10^{5.05}TCID_{50}/ml$ of infectious hematopoietic necrosis virus (IHNV) and $10^{4.05}$ and $10^{4.55}TCID_{50}/ml$ of Oncorhynchus masou virus (OMV) were not detectable after filtration with two types of $0.45-{\mu}m$ filters, except the IHNV titer was reduced by about 10 fold after filter use (company A). No significant difference was found in the virus titer following centrifugation at $880{\times}g$ (30 min) or $3,500{\times}g$ (30 min), whereas IHNV and OMV titers were reduced by about 10 and 10-1000 fold by centrifugation at $14,000{\times}g$ (30 min) and $14,000{\times}g$ (10 and 30 min), respectively. A total of 97.7-99.9% Escherichia coli were eliminated by centrifugation at $880 {\times}g$ (30 min) and $3,500{\times}g$ (30 min). These results show that fish viruses were affected by filtering, even though the effect differed by virus species and filter type. Therefore, centrifugation at $3,500{\times}g$ (30 min) and use of medium with antibiotics may be useful for virus extraction along with a reduction in bacteria.

• Journal of Korean Society on Water Environment
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• v.28 no.4
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• pp.512-522
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• 2012

This study is focused on fish fauna and distributional features along with physical gradients and stream orders in the Tamjin River basin, Korea. Fish sampling and investigation were conducted for 2 years from 2009 to 2010. Total number of fish species collected were 47 species of 16 family. The group of cyprinidae was mostly abundant. Both fish abundance and biotic index were declined with increasing altitude and longitudinal distance from the river mouth. Two species of Zacco temminckii and Pungtungia herzi were prevalent in most of sampling sites and showed no altitudinal and longitudinal differences. Most other species, however, were spatially restricted to specific regional altitudes. Several species including Zacco platypus, Squalidus gracilis majimae and P. herzi were broadly distributed from river mouth to 50 km. Eight species including Z. temminckii and Rhynchocypris oxycephalus only appeared in over 10 km from the river mouth. Both Odontobutis platycephala and Pseudobagrus koreanus were classified as "upstream dewelling species" observed only in over 30 km from the river mouth. High proportion of tolerant and omnivorous species were more dominated in the downstream zone of the dam, whereas intolerant and insectivorous species were abundant in the upstream zone of the dam. The variable of stream order showed positive relationship between number of fish species and total individuals collected. Sensitive species including insectivore had a declining tendency with increasing stream order, while tolerant specie including omnivore species had relatively increased with stream order. Overall, our study suggested that fish distribution considerably depends on altitudinal gradient and longitudinal distance from the river mouth as well as physical habitat.

• Ocean and Polar Research
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• v.35 no.4
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• pp.441-452
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• 2013

The fish species composition of seagrass bed in Chuuk Lagoon, Micronesia, was investigated every month from August 2009 to July 2011, using a seine net for fish caught. A total of 32 fish species belonging to 18 families under 6 orders were identified during the study period. Of these fish, Atherinomrus lacunosus, and Strongylura incise were the major dominant species representing 85.0% in total number of individuals. The number of species and individuals were high from August to December 2009, 2010. The biomass was highest in September 2010 and the diversity index was higher in September 2009, April, August 2010 and July 2011. The 14 dominant species could be divided into 2 groups of 3 individuals based on appearance patterns; (1) resident species and temporal species (9 species, e.g. Atherinomrus lacunosus), juvenile and adults living in seagrass beds and juveniles living only in seagrass beds; (2) temporal species (2 species, e.g. Hemiramphus lutkei), juveniles living only in seagrass beds; (3) temporal species (3 individuals, e.g. Caranx sexfasiatus). For some species, the appearance patterns were affected by water temperature. However, the relationships between sea currents, salinity, tide, and structure of fish assemblage remain unclear. Further studies that regularly monitor sea grass habitats are necessary to clearly understand the correlation between environmental factors and sea grass habitat use patterns in fish assemblages.

• Journal of fish pathology
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• v.15 no.2
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• pp.65-75
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• 2002

This study was performed to know the effects of stress induced by the daily fluctuation of water temperture from 18$^{\circ}C$ to 25$^{\circ}C$ up and down for 30 days on the defence mechanism of olive flounder. Puralichthys olivaceus. To make clear the temperature stress on the defense mechanism of the tested fish. several factors of immune response such as counting of leucocyte appearance in peripheral blood, phagocytic activity in whole blood cells, nitroblue tetrazolium(NBT) reduction, chemiluminescence(CL) response, and lysozyme activity were investigated at 28 days after giving the change of water temperature. The fish was controlled under the none feeding condition during experimental period. Mortality of the tested fish was rapidly increased up to 22% within the first one week of the experimental period without any additional stress factors. The number of neutrophil of peripheral blood in the tested group was significantly higher than the control group at the 2nd week. but the number of lymphocyte was significantly lower than the control group at the 1st and 3rd day of the experimental period. respectively. In the NBT reduction test, the activity of macrophage in the control group fish was the highest on the 7th day while that in the tested group was on the 3rd day. Also. the phagocytosis of tested group against formalin killed cells was retarded compared with the control. CL response of the tested group was significantly lower from 2nd to 5lh day of the experimental period than the control. 'The lysozyme activity of tested group was remained higher during the experimental period than the control. Even though the tested fish showed different results in some non-specific factors of immune respceses between tested and control group fish, olive flounder seems highly adaptable in repealed water temperature change in condition after one week under the given temperature fluctuation range.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.35 no.4
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• pp.366-379
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• 2002

The monthly collected fish samples by three sides tyke nets were analyzed in order to study species composition and seasonal variation of fish assemblage in the coastal water off Gadeok-do, Korea through a year of 1998, During the study period, a total of 136 fish species of 69 families were collected. Trachums japonicus, Konosims punctatus and Mugil cephaus were three dominant species in the fish assemblage and they accounted for $63.7\%$ and $83.1\%$ in the number of individuals and biomass, respectively. Fish species of secondary importance in abundance were Leiognathus nuchalis, Takifugu niphobles, Somber japonious, Trichiurus lepturus, Chelon affinis, Apogon lineatus, Nibea aibiflora and Acanthopagrus schlegeli. The highest number of species was collected in July and the lowest in february. Abundance was high in spring, and low in winter. Species diversity indices showed that the fish assemblage was less diverse in spring than any other seasons.