• Title/Summary/Keyword: F. E, M Analysis

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p-Version Elasto-Plastic Finite Element Analysis by Incremental Theory of Plasticity (증분소성이론에 의한 p-Version 탄소성 유한요소해석)

  • 정우성;홍종현;우광성
    • Computational Structural Engineering
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    • 제10권4호
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    • pp.217-228
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    • 1997
  • The high precision analysis by the p-version of the finite element method are fairly well established as highly efficient method for linear elastic problems, especially in the presence of stress singularity. It has been noted that the merits of the p-version are accuracy, modeling simplicity, robustness, and savings in user's and CPU time. However, little has been done to exploit their benefits in elasto-plastic analysis. In this paper, the p-version finite element model is proposed for the materially nonlinear analysis that is based on the incremental theory of plasticity using the constitutive equation for work-hardening materials, and the associated flow rule. To obtain the solution of nonlinear equation, the Newton-Raphson method and initial stiffness method, etc are used. Several numerical examples are tested with the help of the square plates with cutout, the thick-walled cylinder under internal pressure, and the circular plate with uniformly distributed load. Those results are compared with the theoretical solutions and the numerical solutions of ADINA

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Molecular Biological Studies on the Stress Protein HSP90$\beta$ Gene from Flounder (Paralichthys olivaceus) (넙치(Paralichthys olivaceus) HSP90$\beta$ 유전자의 분자생물학적 연구)

  • Lee, Jae-Hyeong;Kim, Yeong-Tae
    • Microbiology and Biotechnology Letters
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    • 제32권4호
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    • pp.297-306
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    • 2004
  • Heat shock proteins (HSPs) were induced in cells in the thermal stress, and the HSP90 family is one of the major classes of HSPs. Gene encoding HSPs have been characterized from various mammals and piscine. We have cloned and sequenced the HSP90 cDNA from a brain cDNA library constructed from flounder (Paralichthys oliThe result of sequence analysis shows it to be the HSP90~. The nucleotide sequence of the HSP90$\beta$ was composed of 2791 long, encoding 726 amino acid residues. The flounder hsp90$\beta$ gene showed very high sequence homology with hsp90f3 of European sea bass (96.6%), zebrafish (92.9%), Atlantic salmon (92.0%) and human (89.5%). We also constructed a phylogenetic tree based on HSP90 amino acid sequences from vertebrate species. Gene-specific primers were selected and used in RT-PCR reactions to measure the basal hsp90$\beta$ mRNA. The hsp90f3 gene is constitutively expressed at a fairly high level in all examined tissues (brain, liver, kidney, muscle, and spleen). In order to express protein of flounder hsp90$\beta$ in E. coli, we used the His-tagged pETvector. Then, the expression of flounder HSP90$\beta$ was confirmed by Western blot analysis.

An Analysis of Proper Curriculum Organization Plan for Elementary and Secondary Invention/Intellectual Property Education (초·중등 발명·지식재산 교육과정의 적정 편성 방안 연구)

  • Lee, Kyu-Nyo;Lee, Byung-Wook
    • 대한공업교육학회지
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    • 제42권1호
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    • pp.106-124
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    • 2017
  • This study used the secondary Delphi method for experts, in order to propse a proper formation plan for the goal and curriculum of elementary and secondary invention/intellection property education. Its results are as following; First, the key objective of invention/intellectual property education for each school level is evaluated as appropriate. With regard to the key objective, elementary schools are aiming at 'fostering awareness and attitude for invention'(M=4.5), middle schools, 'understanding of invention process and method'(M=4.2), general high schools, 'application and evaluation of invention method'(M=4.1), and specialized high schools, 'understanding and application of Employee Invention'(M=4.6). The objective and goal of education for each school level are also evaluated as appropriate. Second, although the proper formation plans for a key learning element of elementary and secondary invention/intellectual property education were almost identical to an actual formation of preceding literature, overall change is required for the formation balance of each learning element, according to the objective and goal of school-leveled invention/intellectual property education. An appropriate formation shall be focusing on basic learning elements (A, B, C, D, E, and F) for elementary and middle schools(73.2%, 65.1%), lowering somewhat the former elements and increasing expanded learning elements for high schools(51.0%), which are connected to the invention, course(H), and patent application(K). Third, elementary and secondary invention/intellectual property education system should be oriented to its objective and goal. In order to reach this, an appropriate formation plan should be made for each school level, based on the principle of Tyler's learning organization, such as continuity, sequence and integration, which are key learning element. Specialized high schools, in particular, need to be differentiated from general ones, as well as elementary and middle schools. Additionally, for understanding and applying an employee invention, invention/intellectual property education system needs to be established in the phase of secondary occupational education.

Characterization of Xanthomonas axonopodis pv. glycines plasmids

  • Park, Sejung;Kim, Jung-Gun;Ingyu Hwang
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 한국식물병리학회 2003년도 정기총회 및 추계학술발표회
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    • pp.135.2-136
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    • 2003
  • To characterize plasmids in Xanthomonu axonopodis pv. glycines, we isolated plasmids pAG1 from the strain AG1 and pXAG81 and PXAG82 from the strain Bra, respectively, and sequenced three plasmids. The size of plasmids, pAG1, pXAG81, and pXAG82 was 15,149-base pairs (bp), 26,727-bp, and 1,496-bp, respectively Fifteen and twenty six possible open reading frames (ORFs) were present in pAG1 and pXAG81, respectively. Only one ORF homologous to a rep gene of Xylella fastidiosa was present in pXAG82. pAG1 contained genes homologous to avrBs3, tnpA, tnpR, repA, htrA, three parA genes, M.XmaI, R.XmaI, and six hypothetical proteins. pXAG81 contained genes homologous to avrBs3, tnpA, tnpR, repA, htrA, two parA genes, pemI, pemK, mobA, mobB, mobC, mobD, mobE, trwB, traF, traH, ISxac2, and eleven hypothetical proteins. Based on DNA sequence analysis, we presume that pXAG81 is a conjugal plasmid. Interestingly, we found 0.5-kb truncated avirulence gene similar to aurXacE3 on the right border of avrBs3 homolgs of pAG1 and pXAG81. Two hundred twenty five isolates were analyzed to find aurBS3 or tra gene homologs by Southern hybridization. The numbers of avrBs3 homolog varied from 3 in AG1 to 8 in AG166. Two hundred seventeen isolates appeared to can conjugative plasmids (pXAG81 type), and thirty eight isolates appeared to carry non-conjugative plamids (pAGl type). This indicated that aurBs3 gene homologs might be spread by conjugation in X. axonopodis pv. glycines.

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Effects of Copper-bearing Montmorillonite (Cu-MMT) on Escherichia coli and Diarrhea on Weanling Pigs

  • Xia, M.S.;Hu, C.H.;Xu, Z.R.;Ye, Y.;Zhou, Y.H.;Xiong, L.
    • Asian-Australasian Journal of Animal Sciences
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    • 제17권12호
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    • pp.1712-1716
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    • 2004
  • Copper-bearing montmorillonite (Cu-MMT) was produced by $Cu^{2+}$ cation exchange reaction. X-ray diffraction analysis showed that that the (001) basal spacing of the MMT crystal lattice increased from 1.544 to 1.588 nm after $Cu^{2+}$ exchange. This indicated that $Cu^{2+}$ entered into interlayer position of MMT as a hydrated cation or composite cation. In vitro results indicated that Cu-MMT had antibacterial activity on Escherichia coli $K_{88}$. Cu-MMT had unbalanced positive charge after cation exchange. Its antibacterial activity resulted from two aspects, one was electrostatic attraction which made E. coli $K_{88}$ being adhered on the montmorillonite surface, the other was the $Cu^{2+}$ slowly released, which could kill bacteria. In an in vivo study, four replicates of eight weanling pigs were assigned to each of two dietary treatments to study the effects of Cu-MMT on diarrhea, E. coli in the lumen of the jejunum and morphology of jejunal mucosa. As compared to the control, supplementation of the diet with 0.2% Cu-MMT improved average daily gain by 12.50% (p<0.05) and decreased F/G by 9.42% (p<0.05). The mean diarrhrea incidence was decreased by 71.80% (p<0.05). The viable counts of Escherichia coli in jejunal contents were significantly reduced (p<0.05). Villus height and the villus height to crypt depth ratio at the jejunal mucosa were increased by 19.09% (p<0.05) and 37.10% (p<0.05), respectively.

Molecular Cloning and Characterization of the Estrogen Receptor from the Slender Bitterling (Acheilognathus yamatsutae)

  • Kim, Jong-Geuk;Kim, Ha-Ryong;Park, Yong-Joo;Chung, Kyu-Hyuck;Oh, Seung-Min
    • Environmental Analysis Health and Toxicology
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    • 제26권
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    • pp.5.1-5.11
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    • 2011
  • Objectives: In order to identify the possibility of slender bitterling (SB) (Acheilognathus yamatsutae) being used as a test species for estrogenic endocrine disrupting chemicals (EEDCs), we carried out the cloning and sequence characterization of the estrogen receptor (ER). Methods: The ER from a slender bitterling was obtained by reverse transcriptase-polymerase chain reaction (RT-PCR), 5'- and 3'-rapid amplification of cDNA ends (5'-RACE and 3'-RACE) and T-vector cloning. The expression of ER mRNA was also analyzed in six tissues (brain, liver, kidney, gill, gonad, and intestines) by real-time PCR. Results: We obtained an ER from the slender bitterling. The SB ER cDNA was 2189 base pairs (bp) in length and contained a 1707 bp open reading frame that encoded 568 amino acid residues. The SB ER amino acid sequence clustered in a monophyletic group with the $ER{\alpha}$ of other fish, and was more closely related to zebrafish $ER{\alpha}$(88% identity) than to the $ER{\alpha}$ of other fish. The SB ER cDNA was divided into A/B, C, D, E and F domains. The SB ER has conserved important sequences for ER functions, such as the DNA binding domain (D domain), which are consistent with those of other teleosts. Conclusions: The ER of the slender bitterling could provide basic information in toxicological studies of EEDCs in the slender bitterling.

Ahnak depletion accelerates liver regeneration by modulating the TGF-β/Smad signaling pathway

  • Yang, Insook;Son, Yeri;Shin, Jae Hoon;Kim, Il Yong;Seong, Je Kyung
    • BMB Reports
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    • 제55권8호
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    • pp.401-406
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    • 2022
  • Ahnak, a large protein first identified as an inhibitor of TGF-β signaling in human neuroblastoma, was recently shown to promote TGF-β in some cancers. The TGF-β signaling pathway regulates cell growth, various biological functions, and cancer growth and metastasis. In this study, we used Ahnak knockout (KO) mice that underwent a 70% partial hepatectomy (PH) to investigate the function of Ahnak in TGF-β signaling during liver regeneration. At the indicated time points after PH, we analyzed the mRNA and protein expression of the TGF -β/Smad signaling pathway and cell cycle-related factors, evaluated the cell cycle through proliferating cell nuclear antigen (PCNA) immunostaining, analyzed the mitotic index by hematoxylin and eosin staining. We also measured the ratio of liver tissue weight to body weight. Activation of TGF-β signaling was confirmed by analyzing the levels of phospho-Smad 2 and 3 in the liver at the indicated time points after PH and was lower in Ahnak KO mice than in WT mice. The expression levels of cyclin B1, D1, and E1; proteins in the Rb/E2F transcriptional pathway, which regulates the cell cycle; and the numbers of PCNA-positive cells were increased in Ahnak KO mice and showed tendencies opposite that of TGF-β expression. During postoperative regeneration, the liver weight to body weight ratio tended to increase faster in Ahnak KO mice. However, 7 days after PH, both groups of mice showed similar rates of regeneration, following which their active regeneration stopped. Analysis of hepatocytes undergoing mitosis showed that there were more mitotic cells in Ahnak KO mice, consistent with the weight ratio. Our findings suggest that Ahnak enhances TGF-β signaling during postoperative liver regeneration, resulting in cell cycle disruption; this highlights a novel role of Ahnak in liver regeneration. These results provide new insight into liver regeneration and potential treatment targets for liver diseases that require surgical treatment.

Characterization and evaluation of liver fibrosis grade in patients with chronic hepatitis B virus infection and normal transaminases

  • Cristina, San Juan Lopez;Marta, Casado Martin;Mercedes, Gonzalez Sanchez;Almudena, Porcel Martin;Alvaro, Hernandez Martinez;Luis, Vega Saenz Jose;Tesifon, Parron Carreno
    • Clinical and Molecular Hepatology
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    • 제24권4호
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    • pp.384-391
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    • 2018
  • Backgrounds/Aims: The objective of our study was to determine the epidemiological, laboratory, and serological characteristics of patients with chronic hepatitis B virus (HBV) infection and normal transaminases. The study also aimed to evaluate liver damage by measuring the liver fibrosis (LF) grade and to identify possible factors associated with the presence of fibrosis. Methods: A retrospective observational study was conducted in patients with chronic HBV infection and classified as inactive carriers or immune-tolerant. Epidemiological variables of age, sex, immigrant, alcohol consumption, and body mass index (BMI), as well as virological variables (HBV DNA) and transaminase level were collected throughout the follow-up. The LF grade was evaluated by transient elastography. The cutoff value for significant fibrosis (SF) was liver stiffness ${\geq}7.9kPa$. Results: A total of 214 patients were included in the analysis, and 62% of them had a BMI ${\geq}25kg/m^2$. During follow-up, 4% of patients showed transaminase elevation (<1.5 times normal). Most patients had a viral DNA level <2,000 IU/mL (83%). Data on LF were available in 160 patients; of these, 14% had SF, 9% F3, and 6% F4. The variables associated with the presence of SF were transaminase alteration during follow-up, as 23% of patients with SF had elevated transaminases versus 3% of patients without SF (P<0.005), and BMI, as the vast majority of patients with SF (88%) had a BMI ${\geq}25kg/m^2$ versus 56% of patients without SF (P<0.05). Conclusions: In patients with chronic HBV infection and normal transaminases, liver damage does not seem to be related to DNA levels, alcohol consumption, or immigrant status. SF seems to be associated with transaminase alteration during follow-up and elevated BMI. It is therefore recommended to measure LF grade with validated non-invasive methods in such patients.

Crown Shape Control of Pinus koraiensis S. et Z. (VII) - The Influence of Thinning and Stem Pruning on Seed Component(The First Report) - (잣나무의 수형조절(VII) - 잣나무의 간벌과 수형조절이 종자의 성분에 미치는 영향(제1보) -)

  • Song, Jae-Mo;Shim, Tae-Heum;Yi, Jae-Seon
    • Journal of Forest and Environmental Science
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    • 제18권1호
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    • pp.87-96
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    • 2001
  • In order to investigate the influence of increased seed production of Korean white pine(Pinus koraiensis S. et Z.), component of seeds, produced from trees in the thinned stand and the stem-pruned trees in the seed orchard, were analyzed. The results obtained were as follows: 1. General component analysis of seed There is no significant influence of thinning on the seed component in moisture content (thinned- 4.10%, unthinned- 3.74% ), ash (thinned- 2.95%, unthinned- 2.94%), crude lipid (thinned- 67.62%, unthinned- 71.94%), and crude protein (thinned- 17.27%, unthinned- 17.50%). There is no significant influence of stem-pruning on the seed component in moisture content (unpruned- 4.26%, 1m stem-pruned- 4.10%, and 2m stem-pruned- 3.99%), ash (unpruned- 2.08%, 1m stem-pruned- 2.09%, and 2m stem-pruned- 2.15%) crude lipid(unpruned- 68.59%, 1m stem-pruned- 69.52%, and 2m stem-pruned- 72.53%), and crude protein (unpruned- 18.13%, 1m stem-pruned- 17.96%, and 2m stem-pruned- 17.56%) 2. Fatty acid analysis Seeds of tree from thinned and unthinned stands contained two essential fatty acids, i.e., linoleic acid (18:2) (thinned- 54.92%, unthinned- 55.40%) and linolenic acid (18:3) (thinned- 0.19%, and unthinned- 0.23%). Over 94% of fatty acids consisted of linoleic acid (18:2)(55%), oleic acid (18:1) (32%), and palmitic acid (16:0)(7%). T-test showed difference of content at 1% significance level for palmitoleic acid (16:1), stearic acid (18:0) and 8.11, 14-eicosatrienoic acid (20:3) and at 5% for linolenic acid (18:3), but no significant difference for three major fatty acids mentioned above, between two types of trees. Thus thinning may give no influence in fatty acid content. Seeds of three types of trees contained two essential fatty acids, i.e., linoleic acid (18:2)(unpruned- 55.25%, 1m stem-pruned- 54.74%, and 2m stem-pruned- 55.00%), and linolenic acid (18:3)(0.21% for three kinds of trees). Linoleic acid (18:2)(55%), oleic acid (18:1) (32%), and palmitic acid (16:0)(6%) consisted of more than 93% of all fatty acid content. At 5% significance level in F-test, difference was observed in the content of palmitoleic acid (16:1) and 8.11, 14-eicosatrienoic acid (20:3), but not in three major types of fatty acids above mentioned. It is observed that stem-pruning gave no significant influence in fatty acid content in general.

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Using ranked auxiliary covariate as a more efficient sampling design for ANCOVA model: analysis of a psychological intervention to buttress resilience

  • Jabrah, Rajai;Samawi, Hani M.;Vogel, Robert;Rochani, Haresh D.;Linder, Daniel F.;Klibert, Jeff
    • Communications for Statistical Applications and Methods
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    • 제24권3호
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    • pp.241-254
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    • 2017
  • Drawing a sample can be costly or time consuming in some studies. However, it may be possible to rank the sampling units according to some baseline auxiliary covariates, which are easily obtainable, and/or cost efficient. Ranked set sampling (RSS) is a method to achieve this goal. In this paper, we propose a modified approach of the RSS method to allocate units into an experimental study that compares L groups. Computer simulation estimates the empirical nominal values and the empirical power values for the test procedure of comparing L different groups using modified RSS based on the regression approach in analysis of covariance (ANCOVA) models. A comparison to simple random sampling (SRS) is made to demonstrate efficiency. The results indicate that the required sample sizes for a given precision are smaller under RSS than under SRS. The modified RSS protocol was applied to an experimental study. The experimental study was designed to obtain a better understanding of the pathways by which positive experiences (i.e., goal completion) contribute to higher levels of happiness, well-being, and life satisfaction. The use of the RSS method resulted in a cost reduction associated with smaller sample size without losing the precision of the analysis.