• Title/Summary/Keyword: Endangered fish

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Development of a Species Identification Method for the Egg and Fry of the Three Korean Bitterling Fishes (Pisces: Acheilognathinae) using RFLP (Restriction Fragment Length Polymorphism) Markers (제한절편 길이 다형성(RFLP) 분자마커를 이용한 납자루아과 담수어류 3종의 난과 치어 종 동정 기법 개발)

  • Choi, Hee-kyu;Lee, Hyuk Je
    • Korean Journal of Environmental Biology
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    • v.36 no.3
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    • pp.352-358
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    • 2018
  • This study aimed to develop a species identification method for the egg and fry of the three Korean bitterling fishes (Pisces: Acheilognathinae), including Acheilognathus signifer, Acheilognathus yamatsutae and Rhodeus uyekii based on the PCR-based Restriction Fragment Length Polymorphism (RFLP) markers. We conducted a field survey on the Deokchicheon River from the North Han River basin, where the three Acheilognathinae species co-occur, and also analyzed the existing sequence dataset available from the GenBank. We found coexistence of the three species at the study site. The egg and fry were obtained from the host mussels (Unio douglasiae sinuolatus) by hand from May to June 2015 and in May 2017. To develop PCR-based RFLP markers for species identification of the three Acheilognathinae fish species, restriction enzymes pinpointing species-specific single nucleotide variation (SNV) sites in mitochondrial DNA COI (cytochrome oxidase I) and cyt b (cytochrome b) genes were determined. Genomic DNA was extracted from the egg and fry and RFLP experiments were carried out using restriction enzymes Apal I, Stu I and EcoR V for A. signifer, A. yamatsutae and R. uyekii, respectively. Consequently, unambiguous discrimination of the three species was possible, as could be seen in DNA band patterns from gel electrophoresis. Our developed PCR-based RFLP markers will be useful for the determination of the three species for the young and would assist in studying the spawning patterns and reproductive ecology of Acheilognathinae fishes. Furthermore, we believe the obtained information will be of importance for future maintenance, management and conservation of these natural and endangered species.

The Complete Mitochondrial Genome and Molecular Phylogeny of the Flathead Platycephalus cultellatus Richardson, 1846 from Vietnam (Teleostei; Scorpaeniformes) (베트남 Platycephalus cultellatus Richardson, 1846 (Teleostei; Scorpaeniformes)의 전장 미토콘드리아 유전체와 분자계통)

  • Tran, Biet Thanh;Nguyen, Tu Van;Choi, Youn Hee;Kim, Keun-Yong;Heo, Jung Soo;Kim, Keun-Sik;Ryu, Jung-Hwa;Kim, Kyeong Mi;Yoon, Moongeun
    • Korean Journal of Ichthyology
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    • v.33 no.4
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    • pp.217-225
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    • 2021
  • The family Platycephalidae is a taxonomic group of economically important demersal flathead fishes that predominantly occupy tropical or temperate estuaries and coastal environments of the Indo-Pacific oceans and the Mediterranean Sea. In this study, we for the first time analyzed the complete mitochondrial genome (mitogenome) of the flathead Platycephalus cultellatus Richardson, 1846 from Vietnam by Next Generation Sequencing method. Its mitogenome was 16,641 bp in total length, comprising 13 protein-coding genes (PCGs), two ribosomal RNA genes, and 22 transfer RNA genes. The gene composition and order of the mitogenome were identical to those of typical vertebrates. The phylogenetic trees were reconstructed based on the concatenated nucleotide sequence matrix of 13 PCGs and the partial sequence of a DNA barcoding marker, cox1 in order to determine its molecular phylogenetic position among the order Scorpaeniformes. The phylogenetic result revealed that P. cultellatus formed a monophyletic group with species belonging to the same family and consistently clustered with one nominal species, P. indicus, and two Platycephalus sp. specimens. Besides, the cox1 tree confirmed the taxonomic validity of our specimen by forming a monophyletic clade with its conspecific specimens. The mitogenome of P. cultellatus analyzed in this study will contribute valuable information for further study on taxonomy and phylogeny of flatheads.

Study on physical habitat suitability of Gobiobotia naktongensis in Naeseong Stream according to change of bed grain size (내성천 하상 입경 변화에 따른 흰수마자의 물리 서식 적합도 분석)

  • Lee, Dong Yeol;Park, Jae Hyun;Baek, Kyong Oh
    • Journal of Korea Water Resources Association
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    • v.56 no.9
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    • pp.553-562
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    • 2023
  • The Gobiobotia naktongensis is a species endemic to Korea, and it has recently been designated as a class I endangered species of freshwater fish. Naeseong Stream, one of the tributaries of the Nakdong River, where the Gobiobotia naktongensis was first discovered, provided an optimal habitat for the Gobiobotia naktongensis in the past with fine sand beds and riffle. Currently, due to the construction of Yeongju Dam and the excessive dredging of river channels by the local government, the riverbed armoring in the downstream area of the dam is undergoing rapid changes, and as a result, the habitat environment of the Gobiobotia naktongensis is deteriorating. In this study, the variations of the habitat suitability of the Gobiobotia naktongensis due to the change in the riverbed grain size of the Naeseong Stream were analyzed based on the WUA (weight usable area) using the physical habitat model, River2D. The study domain is the reach from Seoktap Bridge to Hoeryong Bridge downstream of Yeongju Dam. The change in riverbed grain size was analyzed using D50 acquired in 2010 and 2020, respectively. The substrate grain size of Naeseong Stream in 2020 was thicker than that in 2010, and the riverbed coarsening phenomenon was evident overall. As a result of the River2D analysis, the area in which the Gobiobotia naktongensis could inhabit was only about 0.75% in 2010 compared to the entire area of the flow, and even this decreased to 0.55% in 2020 due to riverbed armoring.

Ichthyofauna and Community Structure from 21 Lakes in the Yeungnam Area including Gyeongsangbukdo and Gyeongsangnam-do Provinces, Korea (영남지역 21개 호소의 어류상과 군집구조)

  • Kim, Sang-Ki;Kang, Yeong-Hoon;Hong, Gi-Bung;Yoo, Dong-Uk;Suk, Ho-Yeong;Chae, Byung-Soo;Kim, Han-Sun;Hwang, Ui-Wook
    • Korean Journal of Ichthyology
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    • v.23 no.4
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    • pp.288-299
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    • 2011
  • Freshwater fish fauna and community structure were surveyed through 21 lakes in the Yeungnam area including Gyeongsangbukdo and Gyeongsangnamdo provinces, Korean Peninsula from April 2008 to October 2009. Among 21 lakes, 16 lakes belong to the Nakdong River and 5 are independent drainages. From the present study, 61 species (44 genera, 15 families) were collected including 32 cyprinid species (52.5%), 6 cobitid species (9.8%) and so on. The dominant and subdominant species in aspect of the number of individuals were Hypomesus nipponensis (26.6%) and Squalidus gracilis majimae (14.8%), respectively. On the other hand, in aspect of in biomass, dominant and subdominant species were Lepomis macrochirus (19.8%) and Cyprinus carpio (14.7%), respectively. Among 61 examined species, there were found 20 Korean endemic species and 2 Korean endangered species (Pseudobagrus brevicorpus and Pungitius kaibarae). P. brevicorpus was found in Yongyeonji and Yeongcheonho, and P. kaibarae in Yongyeonji. In addition, 5 exotic species were identified such as Cyprinus carpio nudus (leather carp), Carassius cuvieri, Hypophthalmichthys molitrix, Lepomis macrochirus and Micropterus salmoides. Interestingly, a bluegill L. machrochirus appeared dominant or subdominant species in 5 of 21 examined lakes. Five species introduced from the other rivers in Korean Peninsula were additionally described. In the present study, it was first reported that Micropercops swinhonis inhabits in the Nakdong river basin. The fish species diversity, evenness and dominant indices were examined, and a dendrogram based on similarity indices of inhabiting species among the 21 examined lakes was constructed and discussed.

Characteristics of Fish Fauna and Community Structure in Wangpicheon (왕피천 어류상 및 어류군집의 특성)

  • Hong, Yang-Ki;Kim, Kyeong-Hwan;Kim, Kyeong-Moo;Lim, Gwang-Ho;Song, Mi-Young;Lee, Wan-Ok
    • Korean Journal of Environment and Ecology
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    • v.30 no.5
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    • pp.874-887
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    • 2016
  • We surveyed bimonthly from April to October 2015 to understand the fish fauna and community structure in Wangpicheon. The collected species during the survey period were 40 species belonging to 15 families. Dominant species by number were Zacco koreanus (31.3%) and Rhynchocypris oxycephalus (14.7%). In biomass, the dominant species were Z. koreanus (29.2%) and Coreoperca herzi (8.6%). Also, nine endemic species (22.5%) including Squalidus multimaculatus and two endangered species (Lethenteron reissneri, Cottus koreanus) were identified. It was identified one introduced species (Oncorhynchus mykiss) from foreign countries for aquaculture. Compared with previous data, nine species were newly identified including L. reissneri, S. gracilis majimae, Pseudobagrus fulvidraco, O. mykiss, Chelon haematocheilus, Siniperca scherzeri, Acanthogobius lactipes, Luciogobius guttatus and Channa argus. Seven species (Rhodeus ocellatus, S. gracilis majimae, Hemibarbus longirostris, Pseudogobio esocinus, Microphysogobio yaluensis, Hemiculter eigenmanni and Cobitis hankugensis) introduced from other native waters in Korea were estimated. According to the analysis of the habitat characteristics of major migratory species (Tribolodon hakonensis, O. keta and Plecoglossus altivelis), O. keta was observed at station 11 and T. hakonensis at station 7, 10 and 11. These fishes have been mainly identified in the downstream. However P. altivelis was widely distributed from station 3 to 11. In the comparison of average standard length of P. altivelis at each station during the same period, populations collected from station 3 and 5 which are mid-upper area of the stream were $125.8{\pm}34.2mm$. Their growth was good compared with those collected from station 8 and 11 (mid-lower area): $80.2{\pm}16.6mm$. This difference in length comes from the artificial structures including weir, thus it is necessary to create a fishway that enables P. altivelis to pass around barriers for free movement and resource management.

Development of Eggs, Larvae and Juveniles of the Ladislavia taczanowskii from Hongcheongang-River (홍천강에 서식하는 멸종위기종 새미 Ladislavia taczanowskii의 난발생 및 자치어 형태발달)

  • Jae-Min Park;Seong-Jang Cho;Kyeong-Ho Han
    • Korean Journal of Ichthyology
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    • v.36 no.2
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    • pp.109-119
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    • 2024
  • This study was conducted to investigate the early life history by observing the egg development of Ladislavia taczanowskii in endangered fish and to use it as basic data for species conservation research. The broodstork used in the study was secured from the area of the Hongcheon River in Hongcheon-gun, Gangwon State. The broodstork, who was being raised in the laboratory, selected mature individuals in May 2021 and induced them to spawn by hormone injection. The size of the maturation egg was 1.50~1.79 (average 1.59±0.08, n=30) mm due to the circular invasive egg. The incubation time took 168 hours at 16.5℃ and 109 hours and 30 minutes at 25.5℃. Newly hatched larvae, the consonants had a total length of 5.55~6.31 mm (6.30±6.93, n=30) mm, and the mouth and anus did not open and had egg yolk. 5 days after hatching, the preflexion larvae had a total length of 9.91~10.8 (10.1±0.27, n=30) mm, and the mouth and anus opened, and feeding activities began. 8 days after hatching, the flexion larvae had a total length of 10.3~11.4 (10.8±0.38, n=30) mm, and the end of the vertebrae at the tail fin tip began to bend upward. 10 day after hatching, the postflexion larvae had a total length of 11.8~13.1 (12.3±0.43, n=30) mm, and the end of the vertebrae at the tail tip was completely bent at 45°. 18 days after hatching, the total length of the juveniles was 18.9~23.4 (20.4±1.69, n=30) mm, and the number of fins in each part was fin rays with 10 dorsal fins, 9 anal fins, 22 caudal fins, and 7 ventral fins. As a result of the study, the postflexion larvae showed differences in morphology from other Gobioninae fishes in the upper part of the tail's hypural, the shape of spots on the dorsal vertebrae, the vertical stripes developed on the head, and the irregularly deposited melanophore throughout the body.