• 제목/요약/키워드: Electron crystallography

검색결과 59건 처리시간 0.027초

Electron Crystallography of CaMoO4 Using High Voltage Electron Microscopy

  • Kim, Jin-Gyu;Choi, Joo-Hyoung;Jeong, Jong-Man;Kim, Young-Min;Suh, Il-Hwan;Kim, Jong-Pil;Kim, Youn-Joong
    • Bulletin of the Korean Chemical Society
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    • 제28권3호
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    • pp.391-396
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    • 2007
  • The three-dimensional structure of an inorganic crystal, CaMoO4 (space group I 41/a, a = 5.198(69) A and c = 11.458(41) A), was determined by electron crystallography utilizing a high voltage electron microscope. An initial structure of CaMoO4 was determined with 3-D electron diffraction patterns. This structure was refined by crystallographic image processing of high resolution TEM images. X-ray crystallography of the same material was performed to evaluate the accuracy of the TEM structure determination. The cell parameters of CaMoO4 determined by electron crystallography coincide with the X-ray crystallography result to within 0.033-0.040 A, while the atomic coordinates were determined to within 0.072 A.

Recent Advances in Electron Crystallography

  • Chung, Jeong Min;Lee, Sangmin;Jung, Hyun Suk
    • Applied Microscopy
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    • 제47권3호
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    • pp.160-164
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    • 2017
  • Electron crystallography has been used as the one of powerful tool for studying the structure of biological macromolecules at high resolution which is sufficient to provide details of intramolecular and intermolecular interactions at near-atomic level. Previously it commonly uses two-dimensional crystals that are periodic arrangement of biological molecules, however recent studies reported a novel technical approach to electron crystallography of three-dimensional crystals, called micro electron-diffraction (MicroED) which involves placing the irregular and small sized protein crystals in a transmission electron microscope to determine the atomic structure. In here, we review the advances in electron crystallography techniques with several recent studies. Furthermore, we discuss the future direction of this structural approach.

HVEM Application to Electron Crystallography: Structure Refinement of $SmZn_{0.67}Sb_2$

  • Kim, Jin-Gyu;Kim, Young-Min;Kim, Ji-Soo;Kim, Youn-Joong
    • Applied Microscopy
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    • 제36권spc1호
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    • pp.1-7
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    • 2006
  • The three-dimensional structure of an inorganic crystal, $SmZn_{0.67}Sb_2$ (space group $P4/nmm,\;a=4.30(3){\AA}\;and\;c= 10.27(1){\AA}$), was refined by electron crystallography utilizing high voltage electron microscopy (HVEM). Effects of instrumental resolution, image quality, beam damage and specimen tilting on the structure refinement have been evaluated. The instrumental resolution and image quality were the most important factors on the final results in the structure refinement, while the beam damage and specimen tilting effects could be experimentally minimized or controlled. The average phase errors $({\Phi}_{res})$ for the [001], [100] and [110] HVEM images of $SmZn_{0.67}Sb_2$ were $10.1^{\circ},\;9.6^{\circ}\;and\;6.8^{\circ}$, respectively. The atomic coordinates of $SmZn_{0.67}Sb_2$ were consistent within $0.0013{\AA}{\sim}0.0088{\AA}$, compared to the X-ray crystallography data for the same sample.

Structure Factor와 Electron Density간의 관계

  • 서일환
    • 한국결정학회지
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    • 제11권4호
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    • pp.241-246
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    • 2000
  • Structure factor는 위치를 포함한 electron density를 알면 계산되고 역으로 electron density는 phase를 포함한 structure factor를 알면 작도할수 있으므로 structure factor와 electron density는 서로 Fourier transform이다.

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투과전자현미경을 이용한 $SmZn_{0.67}Sb_2$의 3차원적 구조 분석 (Three-dimensional Structure Analysis of $SmZn_{0.67}Sb_2$ by Transmission Electron Microscopy)

  • 김진규;강성권;김완철;김윤중
    • Applied Microscopy
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    • 제34권4호
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    • pp.255-264
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    • 2004
  • 무기결정질인 $SmZn_{0.67}Sb_2$의 3차원적 구조 (공간군 P4/nmm, $a=4.26{\AA},\;c=10.37{\AA}$)를 전자결정학을 이용하여 분석하였다. 3차원적 정보를 얻기 위해서 주요 정대축인 세 방향의 고분해능 이미지의 정보와 16개의 정대축 방향의 회절도형을 조합하였다. 고분해능 이미지의 결정학적 화상처리(CIP)를 결정구조의 보다 정확한 분석을 위하여 사용하였다. 전자결정학을 이용한 분석 결과, [001], [100], [110] 방향에 대한 고분해능 이미지의 ${\Phi}_{res}$는 각각 $17.0^{\circ},\;8.3^{\circ},\;21.9^{\circ}$를 나타내었다. 전자결정학을 이용한 구조 분석 결과에 대한 정확도를 비교하기 위하여 X-ray 회절 분석을 시도하였다. $SmZn_{0.67}Sb_2$의 X-ray 구조 분석 결과, $a=4.276{\AA},\;c=10.287{\AA}$이고 신뢰도($R_{sym}$)는 4.16% 이었다.

Toward High-Resolution Cryo-Electron Microscopy: Technical Review on Microcrystal-Electron Diffraction

  • Lee, Sangmin;Chung, Jeong Min;Jung, Hyun Suk
    • Applied Microscopy
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    • 제47권4호
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    • pp.223-225
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    • 2017
  • Cryo-electron microscopy (cryo-EM) is arguably the most powerful tool used in structural biology. It is an important analytical technique that is used for gaining insight into the functional and molecular mechanisms of biomolecules involved in several physiological processes. Cryo-EM can be separated into the following three groups according to the analytical purposes and the features of the biological samples: cryo-electron tomography (cryo-ET), cryo-single-particle reconstruction, and cryo-electron crystallography. Cryo-tomography is a unique EM technique that is used to study intact biomolecular complexes within their original environments; it can provide mechanistic insights that are challenging for other EM-methods. However, the resolution of reconstructed three-dimensional (3D) models generated by cryo-ET is relatively low, while single-particle reconstruction can reproduce biomolecular structures having near-atomic resolution without the need for crystallization unless the samples are large (>200 kDa) and highly symmetrical. Cryo-electron crystallography is subdivided into the following two categories according to the types of samples: one category that deals with two-dimensional (2D) crystalline arrays and the other category that uses 3D crystals. These two categories of electron-crystallographic techniques use different diffraction data obtained from still diffraction and continuous-rotation diffraction. In this paper, we review crystal-based cryo-EM techniques and focus on the recently developed 3D electron-crystallographic technique called microcrystal-electron diffraction.

The first insight into the structure of the Photosystem II reaction centre complex at $6{\AA}$ resolution determined by electron crystallography

  • Rhee, Kyong-Hi
    • 한국식물학회:학술대회논문집
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    • 한국식물학회 1999년도 Proceedings of the 17th Symposium on Plant Biology Environmental Stress and Photosynthesis
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    • pp.83-90
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    • 1999
  • Electron crystallography of two-dimensional crystalsand electron cryo-microscopy is becoming an established method for determining the structure and function of a variety of membrane proteins that are providing difficult to crystallize in three dimension. In this study this technique has been used to investigate the structure of a ~160 kDa reaction centre sub-core complex of photosystem II. Photosystem II is a photosynthetic membrane protein consisting of more than 25 subunits. It uses solar energy to split water releasing molecular oxygen into the atmosphere and creates electrochemical potential across the thylakoid membrane, which is eventually utilized to generate ATP and NADPH. Images were taken using Philips CM200 field emission gun electron microscope with an acceleration voltage of 200kW at liquid nitrogen temperature. In total, 79 images recorded dat tilt angles ranging from 0 to 67 degree yielded amplitudes and phases for a three-dimensional map with an in-plant resolution of 6$\AA$ and 11.4$\AA$ in the third dimension shows at least 23 transmembrane helices resolved in a monomeric complex, of which 18 were able to be assigned to the D1, D2, CP47 , and cytochrome b559 alfa beta-subunits with their associated pigments that ae active in electron transport (Rhee, 1998, Ph.D.thesis). The D1/D2 heterodimer is located in the central position within the complex and its helical scalffold is remarkably similar to that of the reaction centres not only in purple bacteria but also in plant photosystem I (PSI) , indicating a common evoluationary origin of all types of reaction centre in photosynthetic organism known today 9RHee et al. 1998). The structural homology is now extended to the inner antenna subunit, ascribed to CP47 in our map, where the 6 transmembrane helices show a striking structural similarity to the corresponding helices of the PSI reaction centre proteins. The overall arrangement of the chlorophylls in the D1 /D2 heterodimer, and in particular the distance between the central pair, is ocnsistent with the weak exciton coupling of P680 that distinguishes this reaction centre from bacterial counterpart. The map in most progress towards high resolution structure will be presented and discussed.

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1-D and 2-D Metal Oxide Nanostructures

  • 손영구
    • 한국진공학회:학술대회논문집
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    • 한국진공학회 2012년도 제42회 동계 정기 학술대회 초록집
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    • pp.87-88
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    • 2012
  • Metal oxide nanostructures have been applied to various fields such as energy, catalysts and electronics. We have freely designed one and two-dimensional (1 and 2-D) metal (transition metals and lanthanides) oxide nanostructures, characterized them using various techniques including scanning electron microscopy, transmission electron microscopy, X-ray diffraction crystallography, thermogravimetric analysis, FT-IR, UV-visible-NIR absorption, Raman, photoluminescence, X-ray photoelectron spectroscopy, and temperature-programmed thermal desorption (reaction) mass spectrometry. In addition, Ag- and Au-doped metal oxides will be discussed in this talk.

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정 20면체 쌍정의 전자회절 (Electron Diffraction of Icosahedral Twin)

  • 김호성;정수진
    • 한국결정학회지
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    • 제1권2호
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    • pp.91-98
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    • 1990
  • 급냉 응고한 알루미늄-전이금속 합금으로부터 얻은 정 20면체상에 대한 쌍정 모델을 제시하였다. 이러한 쌍정모델을 이응하여 다중회절을 고려 한 전자 회절도를 계산하였다. 5회 대칭을 갖는 계산된 회절도는 실험에서 얻은 회절도와 잘 일치하였다. 따라서 본 연구에서 제시한 쌍정모델은 정 20면체상과 밀접한 연관이 있으리라 판단된다.

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Crystallographic study of in-plane aligned hybrid perovskite thin film

  • 이린;김세준;성명모
    • 한국진공학회:학술대회논문집
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    • 한국진공학회 2016년도 제50회 동계 정기학술대회 초록집
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    • pp.163.1-163.1
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    • 2016
  • Lead halide perovskites CH3NH3PbX3 (X=Cl, Br, I) have received great interest in the past few years because of their excellent photoelectronic properties as well as their low-cost solution process. Their theoretical efficiency limit of the solar cell devices was predicted around 31% by a detailed balance model for the reason that exceptional light-harvesting and superior carrier transport properties. Additionally, these excellent properties contribute to the applications of optoelectronic devices such as LASERs, LEDs, and photodetectors. Since these devices are mainly using perovskite thin film, one of the most important factor to decide the efficiency of these applications is the quality of the film. Even though, optoelectrical devices are composed of polycrystalline thin film in general, not a single crystalline form which has longer carrier diffusion length and lower trap density. For these reasons, monodomain perovskite thin films have potential to elicit an optimized device efficiency. In this study, we analyzed the crystallography of the in-plane aligned perovskite thin film by X-ray diffraction (XRD) and selected area electron diffraction (SAED). Also the basic optic properties of perovskites were checked using scanning electron microscopy (SEM) and UV-Vis spectrum. From this work, the perovskite which is aligned in all directions both of out-of-plane and in-plane was fabricated and analyzed.

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