• Animal cells and systems
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• 제1권4호
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• pp.577-581
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• 1997

Species diversity of subcortical arthropod communities were assessed in two tropical regions and two temperate regions. In the tropics, communities of subcortical arthropods were more diverse in La Selva, Costa Rica, than on Barro Colorado Island, Panama. Costa Rican communties yielses higher values of both Shannon and Simpson diversity indices than Panamanian communities. Compared to Panamanian communities, Costa Rican ones supported higher measures of both species richness and evenness. Between the two temperate regions, communities of subcortical arthropods in Korea scored consistently higher values of both Shannon and Simpson indices than the ones in eastern Massachusetts, U.S.A. When individual diversity components were compared, however, Korean communities yielded exceptionally high evenness measures but lower species richness than the communities in the U.S.A. Unusually high evenness values of Korean subcortical arthropods were due to extremely low population densities of all component species.

• Journal of Forest and Environmental Science
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• 제26권3호
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• pp.161-170
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• 2010

A study was conducted for indentifying the floral biodiversity of woody species by calculating four diversity indices using data collected from 4 stands of different age groups and disturbance regimes in two areas of Madhupur tract. Results showed that highest species diversity in the old growth secondary coppice forest (>60 years) under moderate anthropogenic disturbances of Madhupur National Park area (delete (D=0.74, H'=3.36) followed by old growth secondary forest stands (>40 years) under moderate disturbances at Bhawal National Park area (D=0.65, H'=2.81). Plant species diversity of the young enrichment plantations (<20 years and <15 years) under high anthropogenic disturbances in both the areas are much low (D=0.54 and H'=2.16 and D=0.52 and H'=1.92 respectively), which indicate high anthropogenic disturbances coupled with introduction of invasive exotics that are rival for endemic species are detrimental for conservation of biological diversity of tropical moist deciduous forests of Madhupur tract in Bangladesh.

• 생명과학회지
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• 제28권1호
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• pp.105-109
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• 2018

생물다양성은 생존하는 유기체들의 변이성으로 정의하며 지구상의 생물의 다양성과 생태계를 구성하는 복잡한 상호작용을 일컫는다. 본 연구는 합천군 덕진천에 서식하는 동물의 종조성과 다양성을 공간적 시간적 양상으로 실시하였다. 2016년 시즌에 동정된 포유류, 연골어류, 경골어류, 조류, 양서류, 파충류, 어류 종의 수는 55분류군이었다. 포유류의 Berger-Parker's index (BPI)는 0.233(지점 A)에서 0.333(지점 D)로 나타났다. 포유류와 조류에 대한 Shannon-Weaver index (H')와 두 다른 다양성 척도(N1과 N2)는 상류지역이 하류 지역보다 높았다. 동물 분류군에 대한 ${\beta}$-다양성은 어류 0.229에서 무척추동물 0.339까지 나타났다. 동물종에 대한 풍부도 지수는 지점과 시기에 따라 변화가 있었다. 지점 A는 포유류, 조류, 양서/파충류에서 높은 풍부도를 나타내었다. 비록 다섯 동물 강에 대한 풍부도 지수(R1, R2)가 시즌 별로 다르지만 유의성을 나타내지는 않았다. 균등도 지수(E1-E5) 역시 시즌 별로 다르지만 유의성을 나타내지는 않았다.

• 생태와환경
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• 제42권3호
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• pp.303-316
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• 2009

Benthic macroinvertebrate communities collected from eight different streams in South Korea were analyzed to compare community and biological indices across different levels of water pollution. The Self-Organizing Map (SOM) was utilized to provide overview on association of the proposed indices. The sample sites were accordingly clustered according to the gradient of pollution on the SOM. While the general trends of the indices were commonly observable according to different levels of pollution, the detailed differences among the indices were also illustrated on the SOM. The conventional diversity and evenness indices tended to be high even though the water quality state was poor representing relatively weak gradient at polluted sites, while the index presenting the saprobic degree such as family biotic index showed the stronger gradient at the polluted area and was robust to present the gradient. Our results also confirmed the general characterization of two indices: The Shannon index is more strengthened by the number of species occurring at the sample sites, while the Simpson index is more influenced by the degree of evenness among the species. The patterning based on the SOM was efficient in comparatively characterizing the proposed indices to present ecological states and water quality.

• 환경위생공학
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• 제18권2호
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• pp.16-26
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• 2003

Analysis of benthic macroinvertebrate community and biological estimation of water quality was conducted at the national park of Mt. Jiri and its nearby area in Gurye, Sancheong and Hadong-gun from June to November, 2002. Total taxa of benthic macroinvertebrates were 124 species, 45 families, 15 orders, 5 classes in 3 phyla. Aquatic insects were 33 species in ephemeroptera, 28 species in Trichoptera, 21 species in plecoptera, 13 species in Diptera, 8 species in odonata, 5 species in hemiptera and 5 species in coleoptera, respectively. Non-insects were 5 species in Mollusca, 2 species in Hirudinea, 1 species in oligochaeta and 1 species in crustacea, respectively. Ephemeroptera, trichoptera and plecoptera as indicators in clean water were very abundant. Occurrence species at each survey area was 68 species at Mt. 1025-goji, 59 species at Mt. Eungseok-bong, 57 species at Mt. Wangdeung-jae, 50 species at Mt. Cheonwang-bong and 39 species at Mt. 645-goji, respectively. Mean species diversity indices at Mt. Cheonwang-bong, Mt. 1025-goji, Mt. Wangdeung-jae, Mt. Eungseok-bong and Mt. 645-goji were 3.33, 3.03, 3.41, 3.02 and 2.91, respectively, According to the saprobic system based on the species diversity indices of benthic macroinvertebrates, most survey areas except some sites are determined as Limnosaprobic area.

• 한국작물학회:학술대회논문집
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• 한국작물학회 2022년도 추계학술대회
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• pp.220-220
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• 2022

Disproportionating Enzyme 1 (DPE1) is an a-1,4-D-glucanotransferase that cleavages the a-1,4-glucosidic bonds and transfers glucosyl groups. In rice endosperm, it participates in starch synthesis by transferring maltooligosyl groups from amylose and amylopectin to amylopectin. Here, we investigated the haplotype variations and evolutionary indices (e.g., genetic diversity and population structure) for the DPE1 gene in 374 rice accessions representing seven subgroups (wild, indica, temperate japonica, tropical japonica, aus, aromatic, and admixture). Variant calling analysis of DPE1 coding regions leads to the identification of six functional haplotypes representing/occupying 8 nonsynonymous SNPs. Nucleotide diversity analysis revealed the highest pi-value in wild group (0.0556) compared to other cultivated groups, of which temperate japonica showed the most reduction of genetic diversity value (0.003). A significant positive Tajima's D value (1.6330) of admixture highlights sudden population contraction under balancing selection, while temperate japonica with the lowest Tajima's D value (-1.3523) showed a selection signature of DPE1 domestication which might be the cause of excess of rare alleles. Moreover, these two subpopulations exhibits a greater differentiation (F_ST=0.0148), indicating a higher genetic diversity. Our findings on functional DPE1 haplotypes will be useful in future breeding programs, and the evolutionary indices can also be applicable in functional studies of the DPE1 gene.

• 미생물학회지
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• 제25권3호
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• pp.229-237
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• 1987

To determine the characteristics of heterotrophic bacterial community in estuarine ecosystem, water and sediment samples were taden from Naktong estuary. All isolates were compared with 73 characters and described by cluster analysis. With same characters, 30 reference strains were able to divide into approximate species level at 80% similarity (S value). Diversity indices ($H^{1}$) of sediment column isolates were higher than water column isolates. The bacterial community commonly appeared in water and sediment column was reduced with going to downstream. Tolerance indices for temperature (Pt) and salinity (Ps) were also higher in sediment isolates than in water isolates. The bacterial community in sediment column is believed to be composed with diverse populations compared to water column and maintains its stability against various environmental changes with high physiological tolerances.

• Mycobiology
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• 제40권3호
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• pp.151-158
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• 2012

Very few studies have addressed the phylogenetic diversity of fungi from Northeast India under the Eastern Himalayan range. In the present study, an attempt has been made to study the phylogenetic diversity of culturable soil fungi along the altitudinal gradients of eastern Himalayas. Soil samples from 24 m above sea level to 2,000 m above sea level altitudes of North-East India were collected to investigate soil micro-fungal community structure and diversity. Molecular characterization of the isolates was done by PCR amplification of 18S rDNA using universal primers. Phylogenetic analysis using BLAST revealed variation in the distribution and richness of different fungal biodiversity over a wide range of altitudes. A total of 107 isolates were characterized belonging to the phyla Ascomycota and Zygomycota, corresponding to seven orders (Eurotiales, Hypocreales, Calosphaeriales, Capnodiales, Pleosporales, Mucorales, and Mortierellales) and Incertae sedis. The characterized isolates were analysed for richness, evenness and diversity indices. Fungal diversity had significant correlation with soil physico-chemical parameters and the altitude. Eurotiales and Hypocreales were most diverse and abundant group of fungi along the entire altitudinal stretch. Species of Penicillium (D=1.44) and Aspergillus (D=1.288) were found to have highest diversity index followed by Talaromyces (D=1.26) and Fusarium (D=1.26). Fungal distribution showed negative correlation with altitude and soil moisture content. Soil temperature, pH, humidity and ambient temperature showed positive correlation with fungal distribution.

• 생태와환경
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• 제57권1호
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• pp.51-59
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• 2024

This note summarizes the application of zooplankton indices for water quality management and estimation based on main research topics of articles focusing on wetland ecosystems, topics that are remained poorly investigated in S. Korea. The aquatic ecosystem-based consists of indices that respond to different target environmental factors, including environmental disturbance. Among the major indicator species and biota, we reviewed that management strategy for the wetland environment has to be focused more on small-sizes, in terms of zooplankton ecology and indices. The ecology of zooplankton communities in freshwater ecosystem has been the focus of an increasing number of studies since 2019, and considerable progress has been made in understanding the major mechanisms involved in regulating their abundance, diversity and spatio-temporal patterns. Even though studies on the freshwater ecosystem in Korea have a long history, a few of studies on zooplankton biota were conducted at wetlands. We suggested the candidate zooplankton indices proposed by the U.S. EPA and EU to suit Korean conditions. In the step of selecting metrics, the best available metrics are species-related variables, such as composition and abundance, as well as richness and diversity. Overall, in spite of several limitations, the development of a plankton-based multivariate assessment method in Korea wetlands is possible using mostly field research data. Later, it could be improved based on qualitative metrics on zooplankton, and with the emergence of further survey data. The present information can be used as basic information for researchers who are dealing with aquatic environments and its interaction with organisms.

• 수산해양기술연구
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• 제46권4호
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• pp.376-391
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• 2010

To investigate seasonal variation and species composition by depth layers in the deep sea ecosystem of the East Sea of Korea, bottom trawl survey was conducted at 4 depth layers during spring and autumn from 2007 to 2009. A total of 47 species were collected and were composed of 23 fish species, 9 crustacea, 6 cephalopoda and 9 gastropoda. The main dominant species at each depth layers were Chionoecetes opilio in 300m, Berryteuthis magister in 500m, Chionoecetes japonicus in 700m and 900m. In spring, richness indices (R) showed low value of 2.01 in 500m depth, and high value of 2.16 in 300m depth. Diversity indices (H') showed low value of 1.53 in 300m depth, and high value of 2.09 in 700m depth. Dominance indices (D) showed low value of 0.15 in 700m depth, and high value of 0.31 in 300m depth. In Autumn, richness indices showed low value of 1.48 in 900m depth, and high value of 2.69 in 300m depth. Diversity' indices (H') showed low value of 1.13 in 300m depth, and high value of 2.23 in 700m depth. Dominance indices (D) showed low value of 0.14 in 700m depth, and high value of 0.54 in 300m depth. In spring, similarity analysis in each depth layers showed the difference between 900m and othe depth layer, on the contrary 500m and 700m showed the similarity. In autumn, similarity analyssis in each depth layers showed the difference between 700m and other depth layers, on the contrary 300m and 500m showed the similarity.