• Title/Summary/Keyword: Diversity Measure

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Developing the Ecological Performance Standard for Replaced Wetlands by Analyzing Reference Wetlands (표준습지 분석을 통한 대체습지의 생태 성능 기준 개발)

  • Koo, Bon-Hak;Jeong, Jin-Yong;Park, Mi-Ok
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.14 no.1
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    • pp.11-22
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    • 2011
  • This study was established to build and suggest the Ecological Performance Standards for replaced wetlands as the mitigation strategies for the construction projects. The request performance and assessment factors and standards were derived by bibliographic review and verified by the field survey for the reference wetlands. And the weights for each factor were derived by AHP(Analytical Hierarchy Process) method. The results are as follows : 1) Assessment factors were induced by in-depth research of many wetland assessment models and benchmarks evaluated ecological functions. This study proposed final 12 assessment factors through ecological specialist and experts interviews added with literature analysis. 2) 10 natural wetlands were selected as Reference Wetlands as the measure to propose assessment factors and assessment criteria. Those reference wetlands are well-conserved inland natural wetlands classified to the one having worthy to conserve (grade "high") according to RAM(Rapid Assessment Method). Reference wetlands chosen by the study are Parksilji, Jeongyangji, Mulkubi, Bawineupkubi, Jilnalneup, Jinchonneup, Doomoso, Haepyung wetland, Whangjeong wetland, and Whapo wetland. The research developed assessment criteria for the performance assessment factors based on several explorations of the reference wetlands. 3) "Requiring performance" of replaced wetlands is defined as "to carry out similar or same ecological functions provided by natural wetlands", in overall. The detailed requiring performances are as follows; ${\bullet}$ to play a role of wildlife habitats ${\bullet}$ to have biological diversity ${\bullet}$ to connect with other ecosystems ${\bullet}$ to provide water environment to perform good ecological functions 4) The assessment factors for required performance are categorized by wildlife habitat function, biological diversity, connectivity of adjacent ecosystem, and water environment. Wildlife habitat category is consisted of wildlife habitat creation, size of replacement wetland, and site suitability. Biological diversity category contains the number of plant species, the number of wildlife species, and number of protected species as the sub-factors. Connectivity of adjacent ecosystem is comprised of wildlife corridor, green network and distance from other ecosystem. Finally, water environment make up with water quality, depth of water body, and shape of waterfront. 5) Finally, every assessment factors were verified and weighted by the AHP methods and the final standards were proposed. The weights of factors of requiring performance suggested as habitat (0.280), connectivity (0.261), diversity (0.260), hydraulic environment (0.199). And those of detailed sub-factors are site suitability (0.118), protected species (0.096), distance to neighbor ecosystem (0.093), habitat creating (0.091), green corridor (0.090) etc.

Genetic diversity and divergence among Korean cattle breeds assessed using a BovineHD single-nucleotide polymorphism chip

  • Kim, Seungchang;Cheong, Hyun Sub;Shin, Hyoung Doo;Lee, Sung-Soo;Roh, Hee-Jong;Jeon, Da-Yeon;Cho, Chang-Yeon
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.11
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    • pp.1691-1699
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    • 2018
  • Objective: In Korea, there are three main cattle breeds, which are distinguished by coat color: Brown Hanwoo (BH), Brindle Hanwoo (BRH), and Jeju Black (JB). In this study, we sought to compare the genetic diversity and divergence among there Korean cattle breeds using a BovineHD chip genotyping array. Methods: Sample data were collected from 168 cattle in three populations of BH (48 cattle), BRH (96 cattle), and JB (24 cattle). The single-nucleotide polymorphism (SNP) genotyping was performed using the Illumina BovineHD SNP 777K Bead chip. Results: Heterozygosity, used as a measure of within-breed genetic diversity, was higher in BH (0.293) and BRH (0.296) than in JB (0.266). Linkage disequilibrium decay was more rapid in BH and BRH than in JB, reaching an average $r^2$ value of 0.2 before 26 kb in BH and BRH, whereas the corresponding value was reached before 32 kb in JB. Intra-population, interpopulation, and Fst analyses were used to identify candidate signatures of positive selection in the genome of a domestic Korean cattle population and 48, 11, and 11 loci were detected in the genomic region of the BRH breed, respectively. A Neighbor-Joining phylogenetic tree showed two main groups: a group comprising BH and BRH on one side and a group containing JB on the other. The runs of homozygosity analysis between Korean breeds indicated that the BRH and JB breeds have high inbreeding within breeds compared with BH. An analysis of differentiation based on a high-density SNP chip showed differences between Korean cattle breeds and the closeness of breeds corresponding to the geographic regions where they are evolving. Conclusion: Our results indicate that although the Korean cattle breeds have common features, they also show reliable breed diversity.

Genetic Diversity and Phenetic Relationships of Genus Oxalis in Korea Using Random Amplified Polymorphic DNA (RAPD) Markers (RAPD마크를 이용한 한국 내 괭이밥속 식물의 유전적 다양성과 표현형 관계)

  • Huh, Man Kyu;Choi, Byoung-Ki
    • Journal of Life Science
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    • v.24 no.7
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    • pp.707-712
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    • 2014
  • We evaluated the phenetic relationships within six taxa of genus Oxalis L. in Korea with random amplified polymorphic DNA (RAPD) markers. Ten primers produced 125 bands for six taxa, and the mean number of bands per primer was 12.5. Across the six taxa, 121 (96.8%) bands were polymorphic, and only four were monomorphic. The mean number of RAPD phenotypes across the six taxa varied from 3.6 (O. stricta and O. corymbosa) to 4.8 (O. corniculata for. rubrifolia). In a simple measure of intraspecies variability according to the percentage of polymorphic bands, O. stricta and O. corymbosa exhibited the lowest variation (28.8%), and O. corniculata for. rubrifolia showed the highest (38.4%). A mean of 32.7% of the loci was polymorphic within taxa. The total interspecies genetic diversity ($H_T$) and intraspecies genetic diversity ($H_S$) was 0.362 and 0.122, respectively. On a per-locus basis, the proportion of total genetic variation due to differences among species ($G_{ST}$) was 0.663. This indicates that about 66.3% of the total variation was among species. The node of O. stricta and O. corniculata for. rubrifolia was strongly supported, with a high bootstrap value in the NJ tree and sistered with O. corniculata. According to RAPD analysis, the number of chromosomes was not congruent with a phenetic relationship.

Why Did Sin-leqe-uninni's Compile the Gilgamesh Epic? (신-레케-우닌니의 "길가메쉬 서사시" 편집의도)

  • Bae, Chull-Hyun
    • Lingua Humanitatis
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    • v.7
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    • pp.157-203
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    • 2005
  • The Epic of Gilgamesh drew heavily upon Mesopotamian literary tradition. Sin-leqe-uninni, the editor of Standard Version of the Epic of Gilgamesh in 13th century B.C.E. adopted the Old Babylonian version as well as older Sumerian tales about Gilgamesh. He also was very successful by extensive use of materials and literary forms originally unrelated to Gilgamesh. The epic opens with a standard type of hymnic-epic prologue. This study lens a measure of vindication to the theoretical approach by which Morris Jastrow recognized the diversity of the sources, which underlies the epic and succeeded in identifying some of them. Thanks to the ample documentation available for the literary development of the epic, we can trace the steps which its author and editors took with the result that the epic inspires fears and aspirations for more than three thousand years.

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Vegetation Dynamics in Afforested Area of Yungil (영일 조림지역의 식생 동태)

  • Ri, Chong Un
    • The Korean Journal of Ecology
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    • v.9 no.1
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    • pp.25-31
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    • 1986
  • A study was made on the change of vegetation in Yungil area after the erosion control works. The area was divided into three major areas, the devastated land area, the afforested area and the subclimax area. Two groups of plant, i.e., the common species in all area and the different species confined in the subclimax area, were identified by the interspecific correlation analysis based on the positive correlation value at 5% significance level. High similarity among the sites in the afforested region was indicated by the DIF (difference measure) value, lower than 0.33. However, the devastated area and the subclimax area were distinguished completely. The change in species diversity has been extremely low since the erosion control works. Robinia pseudo-acacia was the dominant species in the afforested region and showed an adequate growth status.

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A Study on the Research & Analysis of the Health and Safety Managing's Understanding on the Applied Construction Work Site Risk Assessment - Focus on Site Manager & Manager - (건설업 위험성평가 적용사업장 종사자 안전보건 인식도 조사 연구 -사업장책임자 및 관리감독자를 중심으로-)

  • Choi, Soo-Hwan;Kim, Chi-Kyung
    • Journal of the Korean Society of Safety
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    • v.27 no.4
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    • pp.62-67
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    • 2012
  • Risk Assessment, a basis of health and safety management system, is an calamity prevention activity which regularly measure the level of a risk to passively improve potential hazard. A problem, the assessment not being improved to be applied to the construction work site where requires diversity and complexity, causes the assessment to be inefficient to bring quality results. A study on the investigates and compares the surveyed degree of recognitions of workers who works in companies executing the risk assessment By the investigation and comparison, it is expected to bring the better solution for early and efficient application for those companies which are not taking the risk assessment.

HMnet Evaluation for Phonetic Environment Variations of Traning Data in Speech Recognition

  • Kim, Hoi-Rin
    • The Journal of the Acoustical Society of Korea
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    • v.15 no.4E
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    • pp.28-36
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    • 1996
  • In this paper, we propose a new evaluation methodology which can more clearly show the performance of the allophone modeling algorithm generally used in large vocabulary speech recognition. The proposed evaluation method shows the running characteristics and limitations of the modeling algorithm by testing how the variation of phonetic environments of training data affects the recognition performance and the desirable number of free parameters to be estimated. Using the method, we experiment results, we conclude that, in vocabulary-independent recognition task, the phonetic diversity of training data greatly affects the robustness of model, and it is necessary to develop a proper measure which can determine the number of states compromizing the robustness and the precision of the HMnet better than the conventional modeling efficiency.

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Biological Network Evolution Hypothesis Applied to Protein Structural Interactome

  • Bolser, Dan M.;Park, Jong Hwa
    • Genomics & Informatics
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    • v.1 no.1
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    • pp.7-19
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    • 2003
  • The latest measure of the relative evolutionary age of protein structure families was applied (based on taxonomic diversity) using the protein structural interactome map (PSIMAP). It confirms that, in general, protein domains, which are hubs in this interaction network, are older than protein domains with fewer interaction partners. We apply a hypothesis of 'biological network evolution' to explain the positive correlation between interaction and age. It agrees to the previous suggestions that proteins have acquired an increasing number of interaction partners over time via the stepwise addition of new interactions. This hypothesis is shown to be consistent with the scale-free interaction network topologies proposed by other groups. Closely co-evolved structural interaction and the dynamics of network evolution are used to explain the highly conserved core of protein interaction pathways, which exist across all divisions of life.

Identification and Determination of Oil Pollutants Based on 3-D Fluorescence Spectrum Combined with Self-weighted Alternating Trilinear Decomposition Algorithm

  • Cheng, Pengfei;Wang, Yutian;Chen, Zhikun;Yang, Zhe
    • Journal of the Optical Society of Korea
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    • v.20 no.1
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    • pp.204-211
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    • 2016
  • Oil pollution seriously endangers the biological environment and human health. Due to the diversity of oils and the complexity of oil composition, it is of great significance to identify the oil contaminants. The 3-D fluorescence spectrum combined with a second order correction algorithm was adopted to measure an oil mixture with overlapped fluorescence spectra. The self-weighted alternating trilinear decomposition (SWATLD) is a kind of second order correction, which has developed rapidly in recent years. Micellar solutions of #0 diesel, #93 gasoline and ordinary kerosene in different concentrations were made up. The 3-D fluorescence spectra of the mixed oil solutions were measured by a FLS920 fluorescence spectrometer. The SWATLD algorithm was applied to decompose the spectrum data. The predict concentration and recovery rate obtained by the experiment show that the SWATLD algorithm has advantages of insensitivity to component number and high resolution for mixed oils.

Effect of physically contained greenhouse covered by fine mesh on pollen dispersal in maize

  • Watanabe, Shin;Kamada, Hiroshi;Ezura, Hiroshi
    • Proceedings of the Korean Society of Plant Biotechnology Conference
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    • 2005.11a
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    • pp.367-370
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    • 2005
  • The risk from genetically modified (GM) plants results from the possibility of gene contamination producing adverse effects on biological diversity by introducing herbicide or insect resistance into related plants or weeds (NAS 2002). The concern about the leakage of genes from GM plants into the environment has primarily focused on pollen that could be wind-borne for long distances. During the period of fisk assessment in Japan, physical containment is applied as a measure of reducing gene flow via the dispersal of pollen from GM plants into the surrounding environment In this study, we tried to estimate the effect of physically contained greenhouse covered by 1-mm fine mesh to reduce pollen dispersal by researching cross pollination rate between non-GM yellow maize in a greenhouse and silver maize outside the greenhouse.

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