• Title/Summary/Keyword: Covariance Modeling

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A Tutorial on Covariance-based Structural Equation Modeling using R: focused on "lavaan" Package (R을 이용한 공분산 기반 구조방정식 모델링 튜토리얼: Lavaan 패키지를 중심으로)

  • Yoon, Cheol-Ho;Choi, Kwang-Don
    • Journal of Digital Convergence
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    • v.13 no.10
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    • pp.121-133
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    • 2015
  • This tutorial presents an approach to perform the covariance based structural equation modeling using the R. For this purpose, the tutorial defines the criteria for the covariance based structural equation modeling by reviewing previous studies, and shows how to analyze the research model with an example using the "lavaan" which is the R package supporting the covariance based structural equation modeling. In this tutorial, a covariance-based structural equation modeling technique using the R and the R scripts targeting the example model were proposed as the results. This tutorial will be useful to start the study of the covariance based structural equation modeling for the researchers who first encounter the covariance based structural equation modeling and will provide the knowledge base for in-depth analysis through the covariance based structural equation modeling technique using R which is the integrated statistical software operating environment for the researchers familiar with the covariance based structural equation modeling.

Effects of Covariance Modeling on Estimation Accuracy in an IMU-based Attitude Estimation Kalman Filter (IMU 기반 자세 추정 칼만필터에서 공분산 모델링이 추정 정확도에 미치는 영향)

  • Choi, Ji Seok;Lee, Jung Keun
    • Journal of Sensor Science and Technology
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    • v.29 no.6
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    • pp.440-446
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    • 2020
  • A well-known difficulty in attitude estimation based on inertial measurement unit (IMU) signals is the occurrence of external acceleration under dynamic motion conditions, as the acceleration significantly degrades the estimation accuracy. Lee et al. (2012) designed a Kalman filter (KF) that could effectively deal with the acceleration issue. Ahmed and Tahir (2017) modified this method by adjusting the acceleration-related covariance matrix because they considered covariance modeling as a pivotal factor in the estimation accuracy. This study investigates the effects of covariance modeling on estimation accuracy in an IMU-based attitude estimation KF. The method proposed by Ahmed and Tahir can be divided into two: one uses the covariance including only diagonal components and the other uses the covariance including both diagonal and off-diagonal components. This paper compares these three methods with respect to the motion condition and the window size, which is required for the methods by Ahmed and Tahir. Experimental results showed that the method proposed by Lee et al. performed the best among the three methods under relatively slow motion conditions, whereas the modified method using the diagonal covariance with a high window size performed the best under relatively fast motion conditions.

Bayesian Modeling of Random Effects Covariance Matrix for Generalized Linear Mixed Models

  • Lee, Keunbaik
    • Communications for Statistical Applications and Methods
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    • v.20 no.3
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    • pp.235-240
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    • 2013
  • Generalized linear mixed models(GLMMs) are frequently used for the analysis of longitudinal categorical data when the subject-specific effects is of interest. In GLMMs, the structure of the random effects covariance matrix is important for the estimation of fixed effects and to explain subject and time variations. The estimation of the matrix is not simple because of the high dimension and the positive definiteness; subsequently, we practically use the simple structure of the covariance matrix such as AR(1). However, this strong assumption can result in biased estimates of the fixed effects. In this paper, we introduce Bayesian modeling approaches for the random effects covariance matrix using a modified Cholesky decomposition. The modified Cholesky decomposition approach has been used to explain a heterogenous random effects covariance matrix and the subsequent estimated covariance matrix will be positive definite. We analyze metabolic syndrome data from a Korean Genomic Epidemiology Study using these methods.

Negative binomial loglinear mixed models with general random effects covariance matrix

  • Sung, Youkyung;Lee, Keunbaik
    • Communications for Statistical Applications and Methods
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    • v.25 no.1
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    • pp.61-70
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    • 2018
  • Modeling of the random effects covariance matrix in generalized linear mixed models (GLMMs) is an issue in analysis of longitudinal categorical data because the covariance matrix can be high-dimensional and its estimate must satisfy positive-definiteness. To satisfy these constraints, we consider the autoregressive and moving average Cholesky decomposition (ARMACD) to model the covariance matrix. The ARMACD creates a more flexible decomposition of the covariance matrix that provides generalized autoregressive parameters, generalized moving average parameters, and innovation variances. In this paper, we analyze longitudinal count data with overdispersion using GLMMs. We propose negative binomial loglinear mixed models to analyze longitudinal count data and we also present modeling of the random effects covariance matrix using the ARMACD. Epilepsy data are analyzed using our proposed model.

A Mean of Structural equation modeling on AMOS Software (AMOS 소프트웨어에서 구현되는 구조방정식 모형과 의미)

  • Kim, Kyung-Tae
    • Proceedings of the Korean Association for Survey Research Conference
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    • 2007.11a
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    • pp.55-65
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    • 2007
  • In this research, it will be examined on mathematical model of AMOS software program that ues for Covariance Structure Analysis. if we have not understood to mathematical model of Covariance Structure, we fail to understand Structural equation modeling. Similarly If We were not understand to mathematical model of AMOS Software, we do not use Software adequately. Therefore we examine two sorts of Software that be designed for Structural equation modeling or Covariance Structure Analysis. In this research, We will focus on 8 assumption of Structural equation modeling and compare AMOS(Analysis of MOment Structure) program with LISREL(Linear Structure RELation) program. We found that A Program of AMOS Software have materialized with RAM(Reticular Action Model).

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Bayesian modeling of random effects precision/covariance matrix in cumulative logit random effects models

  • Kim, Jiyeong;Sohn, Insuk;Lee, Keunbaik
    • Communications for Statistical Applications and Methods
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    • v.24 no.1
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    • pp.81-96
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    • 2017
  • Cumulative logit random effects models are typically used to analyze longitudinal ordinal data. The random effects covariance matrix is used in the models to demonstrate both subject-specific and time variations. The covariance matrix may also be homogeneous; however, the structure of the covariance matrix is assumed to be homoscedastic and restricted because the matrix is high-dimensional and should be positive definite. To satisfy these restrictions two Cholesky decomposition methods were proposed in linear (mixed) models for the random effects precision matrix and the random effects covariance matrix, respectively: modified Cholesky and moving average Cholesky decompositions. In this paper, we use these two methods to model the random effects precision matrix and the random effects covariance matrix in cumulative logit random effects models for longitudinal ordinal data. The methods are illustrated by a lung cancer data set.

Comparison study of modeling covariance matrix for multivariate longitudinal data (다변량 경시적 자료 분석을 위한 공분산 행렬의 모형화 비교 연구)

  • Kwak, Na Young;Lee, Keunbaik
    • The Korean Journal of Applied Statistics
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    • v.33 no.3
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    • pp.281-296
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    • 2020
  • Repeated outcomes from the same subjects are referred to as longitudinal data. Analysis of the data requires different methods unlike cross-sectional data analysis. It is important to model the covariance matrix because the correlation between the repeated outcomes must be considered when estimating the effects of covariates on the mean response. However, the modeling of the covariance matrix is tricky because there are many parameters to be estimated, and the estimated covariance matrix should be positive definite. In this paper, we consider analysis of multivariate longitudinal data via two modeling methodologies for the covariance matrix for multivariate longitudinal data. Both methods describe serial correlations of multivariate longitudinal outcomes using a modified Cholesky decomposition. However, the two methods consider different decompositions to explain the correlation between simultaneous responses. The first method uses enhanced linear covariance models so that the covariance matrix satisfies a positive definiteness condition; in addition, and principal component analysis and maximization-minimization algorithm (MM algorithm) were used to estimate model parameters. The second method considers variance-correlation decomposition and hypersphere decomposition to model covariance matrix. Simulations are used to compare the performance of the two methodologies.

Implementation of the Ensemble Kalman Filter to a Double Gyre Ocean and Sensitivity Test using Twin Experiments (Double Gyre 모형 해양에서 앙상블 칼만필터를 이용한 자료동화와 쌍둥이 실험들을 통한 민감도 시험)

  • Kim, Young-Ho;Lyu, Sang-Jin;Choi, Byoung-Ju;Cho, Yang-Ki;Kim, Young-Gyu
    • Ocean and Polar Research
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    • v.30 no.2
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    • pp.129-140
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    • 2008
  • As a preliminary effort to establish a data assimilative ocean forecasting system, we reviewed the theory of the Ensemble Kamlan Filter (EnKF) and developed practical techniques to apply the EnKF algorithm in a real ocean circulation modeling system. To verify the performance of the developed EnKF algorithm, a wind-driven double gyre was established in a rectangular ocean using the Regional Ocean Modeling System (ROMS) and the EnKF algorithm was implemented. In the ideal ocean, sea surface temperature and sea surface height were assimilated. The results showed that the multivariate background error covariance is useful in the EnKF system. We also tested the sensitivity of the EnKF algorithm to the localization and inflation of the background error covariance and the number of ensemble members. In the sensitivity tests, the ensemble spread as well as the root-mean square (RMS) error of the ensemble mean was assessed. The EnKF produces the optimal solution as the ensemble spread approaches the RMS error of the ensemble mean because the ensembles are well distributed so that they may include the true state. The localization and inflation of the background error covariance increased the ensemble spread while building up well-distributed ensembles. Without the localization of the background error covariance, the ensemble spread tended to decrease continuously over time. In addition, the ensemble spread is proportional to the number of ensemble members. However, it is difficult to increase the ensemble members because of the computational cost.

Decentralized Filters for the Formation Flight

  • Song, Eun-Jung
    • International Journal of Aeronautical and Space Sciences
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    • v.3 no.1
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    • pp.19-29
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    • 2002
  • Decentralized filtering for a formation flight instrumentation system by INS/GPS integration is considered in this paper. An elaborate tuning method of the measurement noise covariance is suggested to compensate modeling errors caused by decentralizing the extended Kalman filter. It does not require large data transfer between formation vehicles. Covariance analysis exhibits the superior performance of the proposed approach when compared with the existent decentralized filter and the global filter, which has the target-filter performance.

Performance bounds of optimal FIR filter-under modeling uncertainty (모델 불확실성에 대한 초적 FIR 필터의 성능한계)

  • 유경상;권오규
    • 제어로봇시스템학회:학술대회논문집
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    • 1993.10a
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    • pp.64-69
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    • 1993
  • In this paper we present the performance bounds of the optimal FIR filter in continuous time systems with modeling uncertainty. The performance measure bounds are calculated from the estimation error covariance bounds of the optimal FIR filter and the suboptimal FIR filter. Performance error bounds range are expressed by the upper bounds on the estimation error covariance difference between the real and nominal values in case of the systems with noise uncertainty or model uncertainty. The performance bounds of the systems are derived on the assumption that the system uncertainty and the estimation error covariance are imperfectly known a priori. The estimation error bounds of the optimal FIR filter is compared with those of the Kalman filter via a numerical example applied to the estimation of the motion of an aircraft carrier at sea, which shows the former has better performances than the latter.

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