• Title/Summary/Keyword: Coronary vessel segmentation

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Coronary Vessel Segmentation by Coarse-to-Fine Strategy using Otsu Algorithm and Decimation-Free Directional Filter Bank

  • Trinh, Tan Dat;Tran, Thieu Bao;Thuy, Le Nhi Lam;Shimizu, Ikuko;Kim, Jin Young;Bao, Pham The
    • Journal of IKEEE
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    • v.23 no.2
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    • pp.557-570
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    • 2019
  • In this study, a novel hierarchical approach is investigated to extract coronary vessel from X-ray angiogram. First, we propose to combine Decimation-free Directional Filter Bank (DDFB) and Homographic Filtering (HF) in order to enhance X-ray coronary angiographic image for segmentation purposes. Because the blood vessel ensures that blood flows in only one direction on vessel branch, the DDFB filter is suitable to be used to enhance the vessels at different orientations and radius. In the combination with HF filter, our method can simultaneously normalize the brightness across the image and increases contrast. Next, a coarse-to-fine strategy for iterative segmentation based on Otsu algorithm is applied to extract the main coronary vessels in different sizes. Furthermore, we also propose a new approach to segment very small vessels. Specifically, based on information of the main extracted vessels, we introduce a new method to extract junctions on the vascular tree and level of nodes on the tree. Then, the window based segmentation is applied to locate and extract the small vessels. Experimental results on our coronary X-ray angiography dataset demonstrate that the proposed approach can outperform standard method and attain the accuracy of 71.34%.

Generation of Triangular Mesh of Coronary Artery Using Mesh Merging (메쉬 병합을 통한 관상동맥의 삼각 표면 메쉬 모델 생성)

  • Jang, Yeonggul;Kim, Dong Hwan;Jeon, Byunghwan;Han, Dongjin;Shim, Hackjoon;Chang, Hyuk-jae
    • Journal of KIISE
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    • v.43 no.4
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    • pp.419-429
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    • 2016
  • Generating a 3D surface model from coronary artery segmentation helps to not only improve the rendering efficiency but also the diagnostic accuracy by providing physiological informations such as fractional flow reserve using computational fluid dynamics (CFD). This paper proposes a method to generate a triangular surface mesh using vessel structure information acquired with coronary artery segmentation. The marching cube algorithm is a typical method for generating a triangular surface mesh from a segmentation result as bit mask. But it is difficult for methods based on marching cube algorithm to express the lumen of thin, small and winding vessels because the algorithm only works in a three-dimensional (3D) discrete space. The proposed method generates a more accurate triangular surface mesh for each singular vessel using vessel centerlines, normal vectors and lumen diameters estimated during the process of coronary artery segmentation as the input. Then, the meshes that are overlapped due to branching are processed by mesh merging and merged into a coronary mesh.

Deep Learning-Based Lumen and Vessel Segmentation of Intravascular Ultrasound Images in Coronary Artery Disease

  • Gyu-Jun Jeong;Gaeun Lee;June-Goo Lee;Soo-Jin Kang
    • Korean Circulation Journal
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    • v.54 no.1
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    • pp.30-39
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    • 2024
  • Background and Objectives: Intravascular ultrasound (IVUS) evaluation of coronary artery morphology is based on the lumen and vessel segmentation. This study aimed to develop an automatic segmentation algorithm and validate the performances for measuring quantitative IVUS parameters. Methods: A total of 1,063 patients were randomly assigned, with a ratio of 4:1 to the training and test sets. The independent data set of 111 IVUS pullbacks was obtained to assess the vessel-level performance. The lumen and external elastic membrane (EEM) boundaries were labeled manually in every IVUS frame with a 0.2-mm interval. The Efficient-UNet was utilized for the automatic segmentation of IVUS images. Results: At the frame-level, Efficient-UNet showed a high dice similarity coefficient (DSC, 0.93±0.05) and Jaccard index (JI, 0.87±0.08) for lumen segmentation, and demonstrated a high DSC (0.97±0.03) and JI (0.94±0.04) for EEM segmentation. At the vessel-level, there were close correlations between model-derived vs. experts-measured IVUS parameters; minimal lumen image area (r=0.92), EEM area (r=0.88), lumen volume (r=0.99) and plaque volume (r=0.95). The agreement between model-derived vs. expert-measured minimal lumen area was similarly excellent compared to the experts' agreement. The model-based lumen and EEM segmentation for a 20-mm lesion segment required 13.2 seconds, whereas manual segmentation with a 0.2-mm interval by an expert took 187.5 minutes on average. Conclusions: The deep learning models can accurately and quickly delineate vascular geometry. The artificial intelligence-based methodology may support clinicians' decision-making by real-time application in the catheterization laboratory.

Segmentation of Intima/Adventitia of IVUS Image using Fuzzy Binarization (퍼지 이진화를 이용한 IVUS 영상의 내막/외막 분할)

  • Kim, Kwang Baek
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.23 no.12
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    • pp.1514-1519
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    • 2019
  • IVUS is an intra-operative imaging modality that facilitates observing and appraising the vessel wall structure of the human coronary arteries. IVUS is regularly used to locate the atherosclerosis lesions in the coronary arteries. Auto-segmentation of the vessel structure is important to detect the disorder of coronary artery. In this paper, we propose a simple strategy to extract Intima/Adventitia area effectively using fuzzy binarization from intravascular images. The proposed method apply fuzzy binarization to find the adventitia but apply average binarization to locate the intima since they have different homogeneity of pixel intensity comparing with the environment. In this paper, we demonstrate an effective auto-segmentation method for detecting the interior/exterior of the vessel walls by differentiating the fuzzy binarization result and average binarization result from IVUS image. Important statistics such as Intima-Media Thickness (IMT) or volume of a target area can be easily computed from result.

Performance evaluation of vessel extraction algorithm applied to Aortic root segmentation in CT Angiography (CT Angiography 영상에서 대동맥 추출을 위한 혈관 분할 알고리즘 성능 평가)

  • Kim, Tae-Hyong;Hwang, Young-sang;Shin, Ki-Young
    • The Journal of Korea Institute of Information, Electronics, and Communication Technology
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    • v.9 no.2
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    • pp.196-204
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    • 2016
  • World Health Organization reported that heart-related diseases such as coronary artery stenoses show the highest occurrence rate which may cause heart attack. Using Computed Tomography angiography images will allow radiologists to detect and have intervention by creating 3D roadmapping of the vessels. However, it is often complex and difficult do reconstruct 3D vessel which causes very large amount of time and previous researches were studied to segment vessels more accurate automatically. Therefore, in this paper, Region Competition, Geodesic Active Contour (GAC), Multi-atlas based segmentation and Active Shape Model algorithms were applied to segment aortic root from CTA images and the results were analyzed by using mean Hausdorff distance, volume to volume measure, computational time, user-interaction and coronary ostium detection rate. As a result, Extracted 3D aortic model using GAC showed the highest accuracy but also showed highest user-interaction results. Therefore, it is important to improve automatic segmentation algorithm in future

Coronary Artery Stenosis Quantification for Computed Tomography Angiography Based on Modified Student's t-Mixture Model

  • Sun, Qiaoyu;Yang, Guanyu;Shu, Huazhong;Shi, Daming
    • ETRI Journal
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    • v.39 no.5
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    • pp.662-671
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    • 2017
  • Coronary artery disease (CAD) is a major cause of death in the world. As a non-invasive imaging modality, computed tomography angiography (CTA) is now usually used in clinical practice for CAD diagnosis. Precise quantification of coronary stenosis is of great interest for diagnosis and treatment planning. In this paper, a novel cluster method based on a Modified Student's t-Mixture Model is applied to separate the region of vessel lumen from other tissues. Then, the area of the vessel lumen in each slice is computed and the estimated value of it is fitted with a curve. Finally, the location and the level of the most stenoses are captured by comparing the calculated and fitted areas of the vessel. The proposed method has been applied to 17 clinical CTA datasets and the results have been compared with reference standard degrees of stenosis defined by an expert. The results of the experiment indicate that the proposed method can accurately quantify the stenosis of the coronary artery in CTA.

Automatic Segmentation of Coronary Vessel in X-ray Angiography using Non-uniform Illumination Correction and Eigenvalue of Hessian Matrix (X-선 혈관 조영 영상에서 불균일 조명 보정과 Hessian 행렬 고유치를 이용한 심혈관 자동 분할)

  • Kim, Hye-Ryun;Kang, Mi-Sun;Kim, Myoung-Hee
    • Proceedings of the Korea Information Processing Society Conference
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    • 2012.04a
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    • pp.414-416
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    • 2012
  • 본 논문에서는 X-선 혈관 조영 영상 내 심혈관의 추출 방법을 제안한다. 본 방법은 불균일 조명 보정 필터를 사용함으로써 X-선 영상 내에서 나타나는 일정하지 않은 contrast, 낮은 명암도 및 불균일 조명 문제를 해결한다. 또한 영상의 지역적인 밝기 값의 변화의 특징을 고려하면서 분할 대상영역의 각 픽셀들의 2 차 미분((second partial derivation)을 행렬의 요소(element)로 갖는 Hessian 행렬의 고유치 (eigenvalue)를 영역확장의 문턱치 결정에 이용하여 전역적인 밝기값(intensity)만을 사용하는 분할의 단점을보완하였다.