• Title/Summary/Keyword: Coastal fungi

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Penicillium from Rhizosphere Soil in Terrestrial and Coastal Environments in South Korea

  • Park, Myung Soo;Lee, Jun Won;Kim, Sung Hyun;Park, Ji-Hyun;You, Young-Hyun;Lim, Young Woon
    • Mycobiology
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    • v.48 no.6
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    • pp.431-442
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    • 2020
  • Penicillium, the most common genus plays an important ecological role in various terrestrial and marine environments. However, only a few species have been reported from rhizosphere soil. As part of a project to excavate Korean indigenous fungi, we investigated rhizosphere soil of six plants in the forest (terrestrial habitat) and sand dunes (coastal habitat) and focused on discovering Penicillium species. A total of 64 strains were isolated and identified as 26 Penicillium species in nine sections based on morphological characteristics and the sequence analysis of β-tubulin and calmodulin. Although this is a small-scale study in a limited rhizosphere soil, eight unrecorded species and four potential new species have been identified. In addition, most Penicillium species from rhizosphere soil were unique to each plant. Penicillium halotolerans, P. scabrosum, P. samsonianum, P. jejuense, and P. janczewskii were commonly isolated from rhizosphere soil. Eight Penicillium species, P. aurantioviolaceum, P. bissettii, P. cairnsense, P. halotolerans, P. kananaskense, P. ortum, P. radiatolobatum, and P. verhagenii were recorded for the first time in Korea. Here, we provide the detailed morphological description of these unrecorded species.

Plant Growth-Promoting Activity and Genetic Diversity of Endophytic Fungi Isolated from Native Plants in Dokdo Islands for Restoration of a Coastal Ecosystem (해안 생태계의 복원을 위하여 독도에 자생하는 식물로부터 분리된 내생진균류의 식물생장촉진활성과 유전학적 다양성)

  • You, Young-Hyun;Yoon, Hyeokjun;Kim, Hyun;Lim, Sung Hwan;Shin, Jae-Ho;Lee, In-Jung;Choo, Yeon-Sik;Kim, Jong-Guk
    • Journal of Life Science
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    • v.23 no.1
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    • pp.95-101
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    • 2013
  • In this study, plant samples of five species were collected from the Dokdo islands in South Korea. Plant samples such as Asparagus schoberioides, Corydalis platycarpa, Festuca rubra, Sedum oryzifolium, and Setaria viridis were collected from the Dongdo and Seodo. Endophytic fungal strains were isolated from the roots of five plants from the Dokdo islands. Thirty-three fungal strains were isolated from these native plants. All the endophytic fungi were analyzed by internal transcribed spacer (ITS) sequencing (ITS containing ITS1, 5.8s, and the ITS2 region). Waito-c rice seedlings were treated with fungal culture filtrates to test their plant growth-promoting activity. A bioassay of the D-So-1-1 fungal strain isolated from S. oryzifolium confirmed that it has the highest plant growth-promoting activity. All the endophytic fungi belong to four orders: Eurotiales (86%), Capnodiales (3%), Hypocreales (4%), and Incertae sedis (7%). The endophytic fungi were classified as Ascomycota, which contained Aspergillus (12%), Cladosporium (3%), Eurotium (3%), Fusarium (18%), Microsphaeropsis (6%), and Penicillium (58%) at the genus level.

Evaluation of Soil Microbial Population of Paddy Fields in Gyeongnam Province Area (경남지역의 논토양에서 미생물의 다양성 평가)

  • Lee, Young-Han;Choi, Yong-Jo;Park, Sang-Ryeol;Lee, Seong-Tae;Son, Byoung-Gwan;Shon, Gil-Man
    • Korean Journal of Soil Science and Fertilizer
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    • v.34 no.6
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    • pp.387-393
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    • 2001
  • To use as a fundamental data for the sustainable agriculture, which is nowadays a major trend to keep the productivity and conserve the environment, 487 paddy soil samples were collected from 21 regions of the Gyeongnam Province and analyzed the chemical characteristics and microbial population of the soil. The microbial population densities were bacteria $298{\times}10^5$($4{\sim}3000{\times}10^5$ range), fungi $63{\times}10^3$($2{\sim}441{\times}10^3$ range), actinomycetes $19{\times}10^5$($0.2{\sim}1250{\times}10^5$ range), Bacillus sp. $53{\times}10^4$($4{\sim}890{\times}10^4$ range) and Pseudomonas sp. $198{\times}10^4CFU\;g^{-1}$($4{\sim}1724{\times}10^4CFU\;g^{-1}$ range), respectively. The microbial populations of the soil were in general higher in southern area than in the northern area of the Gyeongnam Province. The average ratio of bacteria/fungi population was 473. As soil clay content increased, the populations of aerobic bacteria, actinomycetes and Pseudomonas sp. were remarkably decreased. The ratio of aerobic bacteria and fungi was 1554 in sandy loam and clay loam 1144, while Bacillus sp./fungi ratio was 11 in clay loam and 10 in loam. On the topographical differences, aerobic bacteria and Bacillus sp./fungi ratio were the higher in coastal plains than any other areas. The microbial population densities from different soil types were generally lower in ill-drained paddy field than those of other paddy field. The content of $P_2O_5$, K, Ca, $NO_3-N$ and EC in soil were positively correlated to the population densities of aerobic bacteria, actinomycetes, fungi, Bacillus sp. and Pseudomonas sp.. The soil organic matter and Mg content were also positively correlated to the population densities of aerobic bacteria, actinomycetes, fungi and Bacillus sp.

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New Species and New Records of Buellia (Lichenized Ascomycetes) from Jeju Province, South Korea

  • Wang, Xin Yu;Liu, Dong;Lokos, Laszlo;Kondratyuk, Sergey Y.;Oh, Soon-Ok;Park, Jung Shin;Hur, Jae-Seoun
    • Mycobiology
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    • v.44 no.1
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    • pp.14-20
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    • 2016
  • A new species and 2 new records of lichen genus Buellia were discovered from Chuja-do Island in Jeju Province during a recent floristic survey: B. chujana X. Y. Wang, S. Y. Kondr., L. $L\ddot{o}k\ddot{o}s$ & J.-S. Hur sp. nov., B. halonia (Ach.) Tuck., and B. mamillana (Tuck.) W. A. Weber. The new species is characterized by a brown, areolate thallus, the presence of perlatolic acid, and a saxicolous habitat. Together with previously recorded species, 10 Buellia species were confirmed from Jeju-do Island. Among these species, 3 growing in the exposed rocky area contained xanthone (yellowish lichen thallus, UV + orange), indicating that production of xanthone in this genus might be a defense strategy against the harm of UV light. Although the genus Buellia has been thoroughly studied in Korea before, novel species have been discovered continuously, and large species diversity has been found in this crustose genus, even from a small rocky island. This study indicates that the coastal area harbors a vast number of crustose lichen species, and there is great potential to discover unknown lichens in the coastal rocky area in Korea.

Isolation of Endophytic Fungi Capable of Plant Growth Promotion from Monocots Inhabited in the Coastal Sand Dunes of Korea (사구에 서식하는 단자엽식물로부터 식물 생장 촉진 활성 내생 진균류의 분리)

  • Khan, Sumera Afzal;Hamayun, Muhammad;Rim, Soon-Ok;Lee, In-Jung;Seu, Jong-Chul;Choo, Yeon-Sik;Jin, Ing-Nyol;Kim, Sang-Dal;Lee, In-Koo;Kim, Jong-Guk
    • Journal of Life Science
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    • v.18 no.10
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    • pp.1355-1359
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    • 2008
  • Endophytic fungi predominantly inhabit grasses, and produce a variety of beneficial metabolites for plant growth, as well as help their hosts against pathogens and herbivores. Current study was focused on plant growth promoting activity of endophytic fungi inhabited in the roots of sand dune grasses. We collected 49 fungal isolates from the roots of four most common sand dune grasses and screened them for their growth promoting capacity. Results showed that 37 fungal isolates (75.5%) promoted plant height and shoot length of waito-c rice, 11 fungal isolates (22.5%) suppressed it, while 1 fungus (2%) showed no effect on the growth attributes. The fungal strain Gibberella fujikuroi, along with distilled water and Czapek broth medium, were taken as control for this experiment. It was concluded that a major proportion of endophytic fungi inhabited in the sand dune plants produce metabolites, and thus help in growth and development of the host plant.

Analysis of Genomic Diversity of Endophytic Fungal Strains Isolated from the Roots of Suaeda japonica and S. maritima for the Restoration of Ecosystems in Buan Salt Marsh (부안갯벌 생태계 복원을 위한 칠면초와 해홍나물의 내생진균류에 대한 유전학적 다양성 분석)

  • You, Young-Hyun;Yoon, Hyeokjun;Seo, Yeonggyo;Kim, Miae;Shin, Jae-Ho;Lee, In-Jung;Choo, Yeon-Sik;Kim, Jong-Guk
    • Microbiology and Biotechnology Letters
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    • v.40 no.4
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    • pp.287-295
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    • 2012
  • Eighty-four endophytic fungal strains were isolated and identified from the roots of halophytes collected in Buan salt marsh. All halophyte samples, such as Suaeda japonica, and Suaeda maritima were isolated from Buan salt marsh. All endophytic fungi isolated were analyzed by sequences of internal transcribed spacer (ITS) containing ITS1, 5.8s and ITS2 region. All endophytic fungi expressed that fungal strains belong to eight orders; Pleosporales (45%), Eurotiales (27%), Incertae sedis (11%), Dothideales (6%), Capnodiales (5%), Hypocreales (5%), and Agaricales (1%). All endophytic fungi were confirmed at the genus level of Ascomycota and Basidiomycota, containing Alternaria, Ascomycota, Aspergillus, Aureobasidium, Cladosporium, Eupenicillium, Fusarium, Gibberella, Hypocrea, Lewia, Macrophoma, Penicillium, Peyronellaea, Phoma, Pleospora, Pleosporales, Pseudeurotium, Schizophyllum, and Talaromyces. Alternaria (21%) and Penicillium (13%) were the dominant endophytic fungal strains. In this study, endophytic fungal strains analyzed from S. japonica and S. maritime, Alternaria (21%), and Penicillium (13%) of Pleosporales and Eurotiales in halophytes were very abundant.

Variation in Sodium Chloride Resistance of Cenococcum geophilum and Suillus granulatus Isolates in Liquid Culture

  • Obase, Keisuke;Lee, Jong-Kyu;Lee, Sun-Keun;Lee, Sang-Yong;Chun, Kun-Woo
    • Mycobiology
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    • v.38 no.3
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    • pp.225-228
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    • 2010
  • We studied the resistance of Cenococcum geophilum and Suillus granulatus isolates to NaCl during growth under axenic culture conditions. C. geophilum isolates displayed variations in NaCl resistance; mycelial growth of most isolates was inhibited above 200mM. All isolates of S. granulatus were tolerant to high NaCl content.

Distribution of Azotobacter in Rhizosphere and Sea (Rhizosphere와 해수에 있어서의 Azotobacter의 분포)

  • 홍순우;최영길
    • Korean Journal of Microbiology
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    • v.12 no.1
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    • pp.15-24
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    • 1974
  • This experiment has been carried out with a view to elucidating the distribution of Azotobacter and their population size in rhizosphere and sea and designed ro compare the results with some environmental factors. Results of the experiment are summarized as follows: 1) It was observed that the population sizes of Azotobacter were decided upon the moisture content of soil and that the soil pH was one of the most impertant factors influencing the distribution of Azotobacter. 2)Population sizes of Azotobacter in rhizosphere were changed in accordance with the kinds of vegetation on soil: The rhizosphere where bamboo, corn, legume, and oak inhabit showed the largest population size of Azotobacter. On the other hand, rhizosphere of ginseng revealed no Azotobacter. However, the largest population of general fungi were measured at the rhizosphere. 3)Comparing the population sizes of general microbes in rhizosphere with those of non-rhizosphere, the population sizes of microbes in rhizosphere are larger than those of non-rhizosphere. 4)In coastal environments, population sizes of Azotobacter in surface water of sea are similar to those of the soil(mud) of tidal land. But the sizes are generally smaller than those of terrestrial soils.

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New Record of Lecanora muralis (Lichenized Fungus) in South Korea

  • Wei, Xin Li;Han, Keon-Seon;Lee, You-Mi;Koh, Young-Jin;Hur, Jae-Seoun
    • Mycobiology
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    • v.35 no.2
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    • pp.45-46
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    • 2007
  • Lecanora muralis was found on the rock along coastal line during the field trip in Jeju island in 2006. Thallus crustose, placodioid, closely adnate, forming orbicular patches; upper surface grayish green, glossy; central lobes areolate, marginal parts plane, edges thin pruinose; lower surface ecorticate; apothecia sessile, lecanorine type, exciple dense and intact when young, and disc plane, but when mature, exciple laciniate, disc protrudent, yellowish brown to orange, $0.5{\sim}1.5$ mm in diameter; ascospores ellipsoid, simple, colorless, $12.5{\sim}15.0{\times}5.0{\sim}7.5\;{\mu}m$. Usnic acid and zeorin contained in thallus. This is the first record of this species in South Korea.

Microbial Distribution in Jinhae-bay (I) (진해만의 미생물분포 I)

  • 최영길
    • Korean Journal of Microbiology
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    • v.19 no.2
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    • pp.45-51
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    • 1981
  • The physico-chemical and biological factors of coastal sea water were measured bimonthly from 1976 to 1979 for elucidating the relationship between microbial distribution and environmental factors at Masan and Jinhae bay. The experimental results are summarized as followings : 1) The polulation size of bactriz in sea water were increasing as the water temperature increased, and that was higher at station 2 and 3 than at station 1. The number of fungi showed the highest value on July on bottom. The population size of yeast showed no seasonal variation and also showed a relation with the geographic distance. 2) The correlationship between microbial distribution and environmental factors showed little coefficiency in surface water. And the other hand, at bottom water, between general bacteria and water temperature and dissolved oxygen, and between yeast and salinity, there were relatively high coefficiecy.

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